Drosophila miranda: 108156748
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Entry
108156748 CDS
T06132
Name
(RefSeq) nucleoporin Ndc1
KO
K14315
nucleoporin NDC1
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108156748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108156748
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108156748
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
108156748
NCBI-ProteinID:
XP_017143899
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All DBs
Position
2:11394371..11396552
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AA seq
578 aa
AA seq
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MSHLSTINACKLLLFRRCLQAVLLTVGIQFLLLTIFLLFVNFQLLRPLHWISVTLSLVCS
MYTWFASIPLVGAVVLYGVILCQQHLAERPYCPTRFRWLVHYAPRKLLFLAAHVLVGYLT
AWLYTGYMHTDYRHLWYKCHEQECISAYHVYLLGMGTFAGCYYFVSVHMRQEVEIEFPIV
NHFWGEKLREVLYSSLARSLIKSLLPTLAYTLLFWLFGRVVCHKLSHIFAVDLDERLEGF
FGVATNGRLLFYGWLLTSQILSNMHLMRCFYSMFLSEEFPLAITKNRAAFVQEKEVTVVA
ALGLSNVYVVQCLAAKYLYNLVTAGDSEKRSELFQLTEPGNRPANWRSLCDQCLSLIGNF
TDELIDSMQKISVLKGSPSSPPLTPISESASASLMAERVLTRQYNQMHGIRAMVSPKSNL
IDRPVDRIHRVPDWCERTSMQLEQSLQLLINRIPGIVYMFTEPEGAKTTFLLTHSVPLMF
VIQALSQICVFSLTEDRYGVVQNDLPDIIRSMSRLKGELDKLSSVASNLRGPGSSFSVLR
GAVRRSLFHICVAFGEYLSELIPSGEELHQLQTVINQE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacctctcgacgatcaatgcctgcaagctcctgctgttccggcggtgtctgcag
gcggtgcttctgaccgtgggcatccagttcctgctgctgaccatcttcctgctgttcgtt
aactttcaattgctgcgaccgcttcattggatctcggtcacgctgagtctggtgtgcagc
atgtacacctggttcgccagcatcccgctcgtcggagcggttgtcctgtacggcgtgatc
ctgtgccagcagcacttggccgagagaccgtattgccccacccgcttccgctggctggtg
cactatgcaccccgcaagctgctcttcctggccgctcatgtgctagtcggctaccttacg
gcgtggttgtacactggttacatgcacacggactatcggcatctgtggtacaagtgccat
gagcaggagtgcataagcgcctatcacgtgtacctgctgggcatgggcaccttcgcgggc
tgctattactttgtctcggttcacatgcgccaggaggtcgaaatagagtttcccatagtg
aatcatttttggggcgagaagttgcgagaggtgctctacagcagtctggcccgatcattg
atcaagtcgctcctgcccacgctcgcgtacaccctgctcttttggctgttcggtcgtgtg
gtgtgccacaagttgagccacatctttgccgtggatttggatgagcgactggagggcttc
tttggcgtggctaccaatgggcggctgctcttctacggctggctactcacttcccaaatt
ctaagcaacatgcatctcatgcgctgtttttacagcatgtttctgtccgaggagtttccc
ctggctatcaccaaaaatcgggctgcctttgtccaggagaaggaggtaaccgtggtcgct
gccctcggcctgtccaacgtatacgtggtccagtgcctggctgcaaaatatctgtacaat
ctggttactgccggggactcggagaaacgatcggaactgttccagctaaccgagccgggc
aatcgtccagccaactggcgttcactctgcgaccaatgcctcagccttatcgggaacttc
accgacgaactgatcgattccatgcagaagataagtgttctcaaaggttccccaagcagt
cctccgttgacgccgatcagcgagagcgccagtgctagtctaatggctgaaagagtgctc
acacgccagtacaaccagatgcacggcattcgtgcgatggtctctccgaagagcaatctc
atcgatcgacccgtggacagaatacatcgcgtgcccgattggtgtgaacgcacctccatg
cagctagaacagtctctacagcttctgatcaatcgtattcccggcattgtatatatgttc
accgagcccgagggcgccaagactacattcttgttgacccattcggtacctttaatgttc
gtgatccaggctctgtcccagatatgcgtgttctcgctgacggaggatcgctatggtgtg
gtgcaaaacgatctgccggacatcataaggtcgatgagtcgcctaaagggagagctggac
aagttgagcagcgtggcgagcaaccttaggggtccgggctccagcttcagcgtcctgcgc
ggtgctgtgcgtcgcagtctttttcacatttgcgtcgccttcggcgaatacctcagcgag
ctgataccctctggagaagagctgcaccagctccagacagtgatcaatcaggagtag
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