Drosophila miranda: 108156761
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Entry
108156761 CDS
T06132
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
dmn
Drosophila miranda
Pathway
dmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108156761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108156761
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
108156761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
PIN_4
CSD2
Rrp44_S1
OB_HELZ2
UPA_2
Dis3l2_C_term
HTH_15
Motif
Other DBs
NCBI-GeneID:
108156761
NCBI-ProteinID:
XP_017143913
LinkDB
All DBs
Position
2:complement(20588380..20591681)
Genome browser
AA seq
978 aa
AA seq
DB search
MQTLREFTRKTKRGNILKIVREHYLRDDIGCGSDLCKYCFQNEVYQLTSKHEIASSLFKF
PHYLVLDTNVVLDQIDVLEEDVLHNVIVLTTVLNEMKHKSSSIYKRFNEIIHDRTRNFYV
FVNEHHKDTYADRDPGETANDRNDRAIRMATKWYDTHLETSQSSKELERSGMANTRVVLL
TDDAGNRAKAEAEGILVASASEYVKSLEDFPLLLDKLSHKTFDNEKQALPQYPAHLSMKQ
VLEGLRLKKLLQGAFQASRENYLEGSVNVETYEKGILIQGRECLNRAVDGDMVAVELLPE
SEWSAPSEIVLEEKNVYADDVPSEERAEEEKDMLKQVQQAAAAASAERTPTGRIVGIVRR
KWRQYCGILQPSLIENTNRHIFVPADRKIPRIRIETRQAAKLQNQRIIVTIDTWPRNSRY
PQGHFVRSLGPLGDMATENEVILLEHDVPHCKFSEEVLSFLPKLPWSITAEDYAKRVDLR
ELDICSVDPPGCTDIDDALHCRELPNGNFEVGVHIADVSHFIRPGNALDKEAAARGTTVY
LVGKRIDMVPELLSSNLCSLVGGVERFAFSCVWEVDKEANVIDKRFHKSVIKSKRAMTYE
EAQVLIDDATQQSEIAKSLRHLNRLAKILKKRRMDNGALVLASPEIRFQVDSETHEPLEV
EAKQMRETNSMVEEFMLLANITVAEHISAEFTECAVLRRHPKPPPTNFDPLVKAARYQGF
QVDTETGLVLSHSLDKCVKEDNPYFNTMIRILTTRCMMQAVYFISGSLQKEEFFHYGLAA
PIYTHFTSPIRRYSDIMVHRLLAASIGADSTYAQLLERKSNEELCHNLNYRHKMAQYAAR
ASVGLNTHLFFRGKEEDEEGYVLFVRKNALQVLIPKYGLEGTLYLKTDKDGKDGVERTKS
EVIFTFNEEDHTQRCGNVVFHSFDPVSVRLSLDSSNVQHEKLVFRLVKPYIKGFSVEPST
DADIPPTKKTKKDTKKKN
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgcagactttacgcgaatttacgcgtaaaactaagcgtggaaacatcctaaaaattgta
cgagagcactacctacgcgatgatatcggttgcggctcggatctgtgcaaatattgcttt
caaaacgaggtttatcaattgacgtcgaagcatgagatcgccagcagcctcttcaagttc
ccccactacctggtgttggacaccaatgtggtgctggaccagatcgatgtgctggaggag
gatgtgttgcacaatgtgattgtgctgaccacagtgctgaacgagatgaaacacaaaagc
tcgtccatctacaagcgcttcaacgagatcattcatgatcgcaccaggaatttctatgtg
tttgtcaatgagcatcacaaggacacctatgccgatcgggatccgggggaaactgccaac
gatcgtaatgatcgcgccattcgcatggctaccaagtggtatgacacccatctggagaca
tcgcagtcgtccaaggagttagagcgaagcggcatggccaacactcgggttgtcctgctc
actgacgatgccggtaaccgggccaaggcagaagcagaaggtatcctagtggcctccgcc
tcagagtatgtgaaatctcttgaagattttcccctgctgctggacaaattgtcgcacaaa
accttcgacaacgagaagcaggcattgccgcagtatccagcacatttgagcatgaagcag
gtcctcgagggtctgcggctaaagaagctgttgcagggagcctttcaggcgtccagagag
aactacctcgaaggcagcgtcaatgtggagacctacgagaaggggattctaatacaaggt
cgcgagtgtcttaaccgggccgtggatggagacatggtggcagtggaacttttgccggag
agcgagtggtcggcccccagtgagattgtcctagaggagaagaacgtctacgctgacgat
gtgccgagcgaggagcgcgccgaggaggagaaggacatgctgaagcaagtgcagcaagcg
gccgctgccgcctccgcagagcgcacacccacgggtcggattgtgggcatcgtgcggcgc
aaatggcggcagtattgtggcatcttgcagcccagcctgatagagaacacgaatcgtcat
atttttgtgcccgccgatcgcaagattccccgcattcgcatcgagacgcgtcaggcggcc
aagctgcagaatcagcgcatcattgtgaccatcgatacgtggccgcggaactcgcgctat
ccgcaggggcactttgtgcgctctctgggacccctcggggacatggccaccgagaatgag
gtgatcctgctggagcacgacgtcccccactgcaaattctcggaggaagtcctcagcttt
ctgccaaaactgccctggtccatcactgcggaggactatgccaagcgtgtggatctgcgc
gaactcgacatttgttcggtggatccgcccggctgcacggacatcgatgatgccctccat
tgtcgcgagctgcccaatggcaatttcgaggtgggtgtccacatagccgatgtcagtcac
tttatccggcccgggaatgccttggataaggaggctgctgcccgcggcaccaccgtctat
ttggtgggcaagcgcatcgacatggtgcccgagttgctcagctccaatctgtgctccctg
gtgggtggcgtcgagcggtttgccttctcctgtgtctgggaggtggacaaggaggcgaat
gtgattgacaaacgcttccacaagagcgtgatcaagtccaagcgtgccatgacatacgag
gaggcgcaggtactgatcgatgacgccacgcagcaaagtgaaattgccaaatccttgagg
catttgaatcgactggccaagatcctcaagaaacgacgcatggataacggtgccctggtt
ctggcctcacccgagatccgcttccaggtggacagcgaaacgcatgagcccctcgaggtg
gaggccaaacagatgcgcgaaaccaactccatggtggaggaattcatgttgctggccaat
atcacagtggcggagcacatatccgccgagttcacggaatgcgctgtcctgcgtcgccat
ccgaagccaccgcccaccaactttgatccactggtgaaggctgcccgctatcagggcttc
caggtggacacggagacgggtctggtattgtcacattcgctggacaagtgcgtgaaggag
gacaatccatatttcaacacgatgattcgcattttaaccacacgctgcatgatgcaggca
gtctacttcattagcggcagcctacagaaggaggagttcttccattacggcctggccgcg
cccatttacacgcatttcacatctcccattcgtcggtactcggacataatggtgcatcgc
ctgctggctgcttcgattggggccgacagcacatatgctcagctgctggagcgcaagtcg
aatgaagagctgtgccacaacctgaactaccgccataaaatggcacagtatgcggctcgc
gcctcagtgggtctcaacacgcatctgttcttccgcggcaaggaggaggacgaagagggt
tatgtcttattcgtgcggaagaatgccctgcaagtgctcatccccaagtacggtctcgag
ggtactttgtatttgaagaccgacaaagacggcaaggatggagtggagcgcaccaagagc
gaggtcatattcacattcaacgaggaggatcacacgcagagatgcggcaatgtggtcttc
cattccttcgatccagtctctgtccgattgagtctggattcgtccaatgtgcagcacgag
aaattggtcttccgactagtcaagccctacatcaagggattcagtgttgagccaagtaca
gatgcagatataccacccacaaaaaagaccaagaaggataccaagaagaagaactaa
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