Drosophila miranda: 108157005
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Entry
108157005 CDS
T06132
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
dmn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108157005
03015 mRNA surveillance pathway
108157005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108157005
Enzymes [BR:
dmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108157005
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108157005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
108157005
NCBI-ProteinID:
XP_033244823
LinkDB
All DBs
Position
2
Genome browser
AA seq
479 aa
AA seq
DB search
MTDWVKKAEDQEVTKLVDQLQIQSDENAFAIRNNSSMYDLPATKNDEECEPEVADPAETS
LLIKILGKGLVNPKLSLDVQQQNPNSPLHSVKTFEALDLKTELLKGIYAMGFNTPSKIQE
TALPMLLGDPPQNMIAQSQSGTGKTAAFVLAMLSRVNVNLNHPQVLCLSPTYELAIQTGE
VAARMGQYCPDIKLRFAVRGEEVDRNNKITEHILIGTPGKMLDWGYKFRLFDMKKISVFV
LDEADVMIATQGHHDQCIRIHKMLNHHCQILFFSATYDREVMEFAKLIVTEPTIIRLNRE
QESLDNIKQYYVKCKNEDGKYNAIQNIYGCISIGQAIIFCHTRRTAAWLASKMATDGHSV
AVLSGDLTVDQRLAVLDRFRSGLEKVLITTNVLSRGIDIEQVTIVVNFDLPVDIRGNADC
ETYLHRIGRTGRFGKSGIAINLVSGEKCMSVCSAIEKHFKKDIQVLNTDNADDIEKIGN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgacggattgggttaaaaaagcagaagaccaggaagttaccaaactggttgaccaactt
caaattcaatctgatgagaatgcgtttgctatcaggaacaacagttctatgtatgatttg
ccggcaacgaaaaatgatgaagaatgcgaaccggaggtcgctgaccctgctgaaaccagc
ctcctaattaaaatattgggaaaaggattggtaaacccaaaattatctcttgatgtacag
caacaaaatccgaattcacccctacattctgtgaaaactttcgaagcattagatctgaag
acggaacttttaaaaggcatttacgcaatgggctttaacacgccgtcgaaaatacaagag
actgctttgccaatgctccttggagatccaccacaaaatatgatagctcaaagccagtct
ggaacaggaaaaacggctgcctttgtcttggcaatgcttagccgtgtgaacgttaattta
aatcaccctcaggtcctgtgcttgtcccccacatatgaattggcaatccaaacaggggaa
gttgctgcacgtatgggacagtactgtcccgacatcaaactaagatttgcagttcgcggt
gaagaagttgatcgtaataacaaaattactgagcacatcctaattggaacaccaggcaaa
atgttagactggggatacaagtttcgtctttttgacatgaaaaaaatttcggtttttgta
ttagacgaagcagatgttatgatagccactcaaggtcaccatgatcagtgtattcgaata
cataaaatgctcaatcatcattgccaaattttgtttttctctgctacctatgatagggaa
gtgatggagtttgctaaactaattgttactgagccaacaattataagattgaatcgagag
caggaatctcttgataatattaaacagtattacgttaaatgtaaaaatgaagacggaaaa
tataatgcaatacaaaatatttatggatgcatcagcattggccaagccatcatattttgt
catacgcgtcgtactgctgcttggcttgcatcgaagatggctacggatggtcattctgtt
gctgttctttctggtgacttgactgttgatcaacgacttgctgttttggatcgatttcgt
tcaggactagaaaaagttctcataaccacaaatgtcttatcaaggggtattgacattgaa
caagttacaattgtcgttaattttgacctgccggtagatattcgaggcaacgcagactgc
gagacatatttgcatcgcatcggacgtaccggacgatttggaaagtctggaatcgctata
aaccttgtaagcggagaaaaatgtatgtcagtgtgtagtgccattgaaaaacattttaaa
aaagacattcaagttttaaatactgataacgctgatgacattgaaaagattggaaactaa
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