Drosophila miranda: 108157297
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Entry
108157297 CDS
T06132
Name
(RefSeq) probable histone-binding protein Caf1
KO
K10752
histone-binding protein RBBP4
Organism
dmn
Drosophila miranda
Pathway
dmn03082
ATP-dependent chromatin remodeling
dmn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108157297
03083 Polycomb repressive complex
108157297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmn03036
]
108157297
Chromosome and associated proteins [BR:
dmn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
108157297
Histone modification proteins
HAT complexes
HATB complex
108157297
HDAC complexes
Sin3A-HDAC complex
108157297
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
108157297
PRC2.2
108157297
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
108157297
Heterochromatin formation proteins
Other heterochromatin formation proteins
108157297
Chromatin remodeling factors
NuRD complex
108157297
NuRF complex
108157297
NuRF complex (fruit fly)
108157297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_WDR75_2nd
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
108157297
NCBI-ProteinID:
XP_017144788
LinkDB
All DBs
Position
2:complement(22044389..22048380)
Genome browser
AA seq
441 aa
AA seq
DB search
MSRAWRPLSELSVDDYVDVDVDVDGDGDAEQSIIEEYNIWKKNTPYMYDEIVTHALEWPS
LTAQWLPGASGQVGKEYSVHRLILGTHTTNNEPHQLLIASVPVPTEEAQIDRSRYDNEMG
ENGGFGPGCGKIKMEVIINHEGEVNRARYMPQHSCIIATKSPTSDVLVFDYTKHPSKPES
PGKCVPDLRLRGHTKGEFGLSWHPKQMGYLLSASDDKKICLWDINAAPKTHRVIDAVNIF
TGHNAPVRDVAWHNQQQTVFGSVARKLMIWDIRNGNPPQPLFKVDAHADAVTCLSFIPIS
EYTLVTGSADMTVALWDFRNLKNKLHFLGAHRGLITQIHWNPSNENIVASASTDCRLNVW
MLSKIGDEQCQDEAVDGPPELLFIHGGHTAIINDFSWFPNQMFPWTICSVSADNVMEVWQ
MADIVYQEDEEPGSEVPESNN
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtgcctggcgtccattgtcggaactcagtgtcgatgactatgtcgatgtcgat
gtcgatgtcgatggcgatggcgatgccgagcagtcgatcatcgaggagtacaatatatgg
aagaaaaatacaccatatatgtacgatgagattgtgacacacgctctcgagtggccatcg
ttgacggcccagtggctgcccggtgcatccgggcaggtaggcaaggaatactcggtgcat
cgtctcattttggggacacacacgacgaacaacgaaccgcatcaattgctgattgccagc
gtgccggtccccaccgaggaggcacagattgatagatcgcgttacgacaatgagatgggc
gagaacggtggctttggtccggggtgtggcaaaatcaaaatggaggtcatcatcaaccac
gaaggtgaggtgaaccgtgctcgctacatgccacaacactcttgcatcatagccaccaaa
tcgccaacgagcgatgtcctggtgtttgactacacaaagcacccgagcaagccggaaagt
cccggcaaatgcgtgccagatctgcgcctgcgtggccacacgaagggggaatttggcctc
tcctggcatccgaaacagatgggttacttgctgtcggcttctgatgataaaaaaatatgc
ttgtgggacattaatgccgcacccaagacccatcgcgtgatcgatgccgtgaacattttc
actggacacaacgctccagtgcgcgatgtcgcctggcacaatcagcagcaaacagtcttc
ggttctgtggctcggaagctcatgatctgggatatacgcaacggcaacccgccacagcca
ttgtttaaggtcgatgcccatgcagacgctgtgacttgtctgtctttcattcccatctca
gagtacacgttggtcactggatccgctgacatgactgtcgccttgtgggatttccgtaat
ctgaagaataaattacatttccttggggcacaccggggattgatcacccagattcattgg
aatccctcaaatgaaaatatcgtcgcttcggctagcaccgattgccgcttgaacgtatgg
atgttgtcgaaaattggcgacgaacaatgccaagacgaggccgtggatgggccgccagag
ctgctcttcatccacggcgggcatacggccataatcaacgacttctcgtggtttcccaat
caaatgttcccatggaccatatgctctgtgtccgccgacaatgtgatggaagtgtggcaa
atggccgacatcgtgtaccaggaagatgaggagccggggtccgaggtaccggaatccaac
aactaa
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