Drosophila miranda: 108157578
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Entry
108157578 CDS
T06132
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmn03009
]
108157578
Ribosome biogenesis [BR:
dmn03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
108157578
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_2nd
Beta-prop_LRRK2
Beta-prop_HPS5
WDR54
Beta-prop_Vps41
NRBF2
Motif
Other DBs
NCBI-GeneID:
108157578
NCBI-ProteinID:
XP_017145191
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Position
XL:5732655..5734348
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AA seq
490 aa
AA seq
DB search
MGDAVEALFVSACSEENTTCSVQDLRTGTDLMKYKGGGNAQHHSLAMIGLNYVLAANTIK
PLLHVWPINKQEQMSSLRFVLPGKANAMALTPDGAYLVVGIQESIYIWHMSTGRMLNTLS
KHYQAITCLRFTDNGERFVSAGKDGAVLVWDLTFSVAPLDNGSQEGSEPLYSFNDHGLAV
TDLHTGIGGIRSYLYTVSLDRCCKVYDLNGGIMLLSIVFPIALHSVVVNRMETSIYVGSA
EGKSFVFHNWRAPRMKEYHLEEDDAQAFIGHTVGKPITSLALTMNAQLLVSGGEDKQVCV
WDVTSRQLMKSIPQNGVITNLRIRLLSPAIFQPQHKQPQLFANSLKRMITPPDANDYIEL
LVTNEYPKARAKPKLNFDSCNLGPEDKKILQKMQHVNLGADDDDIEFDEEALKSTRQSSK
VKDKDVALAVEEDFHKAHSNDPAVQKLIAENRRLKKKNEEVLQTMAKYLVDHSESGKGPP
QRNRKKARKN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgctgtggaagctttattcgtcagcgcctgcagcgaggaaaacacaacatgc
agcgtccaggatctgcgcactggcaccgacctaatgaagtacaagggcggcgggaatgcc
caacaccacagtctggccatgattgggctgaattatgttctggcagccaacacaattaag
cctttgctccacgtctggcctatcaataagcaggagcagatgtcgagcctgcgatttgtg
ttgccaggcaaggccaatgctatggccctcactccagatggcgcgtacctggtagttgga
atacaggagagcatttatatctggcacatgagcactggccgcatgctgaacaccctctcg
aaacactaccaggccataacctgtctgcgcttcactgacaatggggagcgctttgtcagc
gccgggaaagatggggccgttctggtctgggacctcaccttctcagttgcaccgctagac
aacggcagccaggaaggcagtgagcctctgtacagctttaacgatcatggcctggctgtg
acggatctgcacactggaattggtggcattcgctcctacttatacacagtgtcactagac
cgctgctgcaaagtatatgatctaaacggtggcatcatgctcctcagcattgtgttccca
atagcactgcacagcgtggttgtcaataggatggagaccagcatttatgttggctccgcc
gaaggcaagtcgtttgtgtttcacaattggagagcgccacggatgaaggaataccatctg
gaggaggacgatgctcaggcctttatcggccatacggttggaaaacccataacctccttg
gctctgacaatgaatgcccaactgttggtctctggcggtgaggataagcaagtctgcgtt
tgggatgttacgagtcggcagctcatgaagagtattccccagaacggcgtgatcactaat
ctgagaatccgtcttctcagtcccgccattttccagccgcaacacaagcagccacaatta
ttcgcaaacagtctcaagcggatgatcacgcctccggatgctaatgattatattgagctg
ctcgtcaccaacgagtaccccaaagcacgtgccaaaccaaagctaaattttgacagctgt
aacttgggtccggaggataaaaaaatattacaaaaaatgcagcacgtaaatctgggcgcc
gatgacgatgatattgaatttgacgaggaggcgttgaagtcaactcggcaatcttccaag
gttaaagataaagatgtggctttagcggtcgaggaagactttcataaggcccattccaat
gaccctgcagtacagaaacttatcgccgaaaaccgacgactcaaaaagaaaaacgaggaa
gtgcttcaaaccatggcgaagtatttggtagaccattcggaaagcggtaagggtcctcca
cagagaaatcgcaagaaagctcgtaagaactag
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