Drosophila miranda: 108158473
Help
Entry
108158473 CDS
T06132
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
dmn
Drosophila miranda
Pathway
dmn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108158473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmn03400
]
108158473
DNA repair and recombination proteins [BR:
dmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
108158473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
108158473
NCBI-ProteinID:
XP_017146265
LinkDB
All DBs
Position
3:4180056..4185991
Genome browser
AA seq
1250 aa
AA seq
DB search
MSDEEEDSVSEGFSASEDEWKPNKDARGGESSDDDDSEFDEMQVAGAAGAAGPSGRSSAG
ASKKSRDQKPPSGIKGASVKKRKPSGQSLRSKLYNKYRPPPKTFQTSPSQQNSPSASGSK
NARTPNESGSQDRQYADSSSESSVEDYLVNPADLDLRSSFFSAQPPSKDKSPAPQFDCNA
GVKILSDSGSEDNNDSSVEDKATNAFDFRGLLENANSLERTRDALARRAVTAASPKNRAA
TMDVNALLALGENPNQNYAKAIESDKDEVKEERAGRRAAAEAPPPPLDGPPRLSKTKSTR
IKRHTKTRPVSTVVAAAQDTDDSDFEEVADAELGSDEDGAATPNISGDLEIHIGLQSGHV
TKEQKTQHELEMALKRRLNRDIKDRYQLQHKVSLLAQMTRSMLYNRLLGDSELMNGALKL
LPSRNAYPTERGTELKYLQSFVTWFKTAIKLLSPQLYPERTAGTKQGIVKELLTQISRKE
ARCKQDMIFIFIVLARGMGMHCRLIVNLQPMPLRPAASDLIPIKLKSNEANKNRSQTVDS
DDKSVSGGETTERKGAAKAKPAGVSSVMNTSKPKLGSPTEPKGPNPSSRSLKSVKKESGA
AKPAKKEAEDIKPGCSPIAKSRIVKKEPERALKSDVVASPPKRGLKAHPKSEKCVFEEKP
STSKAARPQLSALKRASTVTGMAAADESKKSRLAPDNVFSPVAGRTRKAAERPIPAALQK
NRVGSPQKVGSPVIPKLVFSKAKLQNAKHSDAENANPTEKHQPQHKQQLGTRETRSRSKS
PKVHISPTFLTGKSGAARADSTPSQALTKSQEAEAGAGAGARTAPGRQLRTRQPKIGKQA
IPQLDGADDLPVAKKRLKLEKLHRSPDSDEVFEPARPVKKAPVLPKAVEKLRKDRRVLST
DDESGSKGKPRLDASDMWVEVWSEVEEQWICIDLVKLKLHCVDTIRKNASPGLAYVFAFQ
DDLSLKDVTARYCANWSSIVRKARVEKCWIDETIAPYLGRRTKRDICEDEQLRRIHSEKP
LPKSIAEFKDHPLYVLERHLLKFQGLYPADAPTLGFIRGEAVYSRDCVHLLHSREIWLKS
ARVVKLGEQPYKIVKARPKWDKLTRSVIKDQPLEIFGYWQTQDYEPPTAENGIVPRNAYG
NVELFKACMLPKKTVHLRLPGLMRVCKKLNIDCANAVIGFDFHQGACHPMLDGFVVCEEF
REVVCAAWEEDQQEQARKEQEKYETRVFGNWKKLIKGLIIRERLKRKYNF
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaagaagaagactcggtgtccgagggcttctctgccagcgaagatgagtgg
aagcccaacaaagatgctcgtggaggcgaatcatcggacgacgacgatagcgaattcgat
gagatgcaagtagcaggggcggctggtgctgcagggcctagcggccgatcatctgcgggc
gcgtcaaaaaagagcagggatcagaaaccgccaagcggcataaagggagcttcagtaaag
aagcgcaagccaagtgggcaatctctgcgctcaaagctgtacaacaagtaccgaccgccg
cccaaaacgtttcaaacttcaccctctcagcagaactcgccatcagcgtcgggttcaaaa
aacgcaagaacgcccaatgaaagcggttcacaggatcggcagtatgctgattccagcagt
gaatccagcgtggaggactatttggtgaatcctgctgacctcgatctgcgctcgagcttc
ttttcggctcagccaccgtcaaaggataaatcgccagcgccgcaattcgattgcaatgca
ggtgttaaaattctctccgactccggttccgaggataacaacgacagcagcgtcgaggac
aaagcgaccaatgcgtttgacttccgcgggctcctagagaatgccaacagtctggagcgc
accagggatgcactggccagacgcgccgtcacagccgcatcgccgaaaaaccgcgccgca
acaatggatgtcaatgcactgcttgcattgggcgaaaatccaaatcagaactacgccaag
gctatcgaatctgataaggacgaggtgaaggaggagcgagcagggcgacgagctgcagca
gaggccccgccgcctcccttggacggaccgcctcgtctaagcaagaccaagtcgacgcgc
ataaagcgacacaccaagacgcggcccgtgtccactgtggtagctgctgctcaagacaca
gacgactccgattttgaggaagtggcagacgcggaacttggcagcgacgaggatggtgcc
gccactccgaacatctctggcgatctggaaatccacatcggcctgcagtccggccacgtt
accaaggagcagaagacccagcacgaactggagatggcgctcaagcgtcgcctcaaccgc
gacattaaggatcgatatcagctgcagcacaaggtcagtctgctggcccaaatgacccgc
agcatgctgtacaatcgcctgctgggcgactccgagctaatgaacggggcattgaagctg
ctgcccagcaggaatgcctatcccacggagcggggcaccgagctgaagtatctgcaatcc
tttgtcacctggttcaaaactgccatcaaactactgagcccccaattgtatcccgagcga
acggcgggtaccaagcagggcattgtcaaagagctgctcacgcaaatttctcgtaaggaa
gctcgctgcaagcaggatatgatcttcatatttattgttcttgcgcgaggtatgggcatg
cactgccggctgatcgtcaatctacagccaatgccgttgcggccggcagccagtgaccta
attcccatcaagctgaagtcgaatgaagcgaataagaatcggagtcagacggtcgactcc
gatgataagagcgtctccggtggcgaaacgacggagcgcaaaggtgctgccaaggccaag
cccgcgggggtgagcagtgtaatgaacactagcaagccaaagctgggctccccaacagaa
cctaaagggccgaatcccagttcacgcagtttaaaaagtgtcaagaaggagagcggtgca
gctaaaccggccaaaaaagaggctgaagacataaagccgggctgtagtcccatcgcaaag
tccaggatagtcaagaaggaaccagagcgggcactgaaatctgacgtggtcgcaagccct
cctaaaaggggtcttaaagcgcacccaaagtccgaaaaatgtgtcttcgaggaaaaacca
agtacttcgaaagcagccaggccgcagttgtctgcgctaaagcgtgccagcacggttaca
ggaatggcggccgcggacgagagtaagaaatccaggttggctcctgacaatgtgttctcc
ccagtagcaggacggacgcgcaaagcagctgaaaggccaatacctgcagctctgcaaaag
aacagagtggggtccccgcagaaggtcggatcccccgtcattcctaaactggtcttttca
aaagccaaactgcagaatgccaagcacagtgatgccgagaacgcaaatcccacagagaag
catcagccgcagcataagcagcagctaggtacgcgagaaacacggtcgcgtagcaagtcg
ccaaaggtccacatctcacccacttttttaacgggtaaatctggcgcagcaagagcagat
agcactccgagccaggcgcttaccaagagccaagaggctgaggctggggctggggctggg
gccagaacggctcctggacggcagcttcggactcgacagccgaagatcggaaaacaggcc
ataccgcagttagatggcgccgacgacctgccagtggccaagaagcgtctgaagttggag
aagctacataggtcgcccgactccgacgaagtatttgagccagccaggccagtgaagaaa
gcgccggttctgcccaaggcagtggaaaagttgcgcaaggacaggcgagtcttgtccaca
gacgatgagagcggctcaaaaggcaagcccaggcttgacgcatccgacatgtgggttgag
gtctggtccgaggtggaggagcagtggatctgcattgacttggtgaagctaaagttgcac
tgcgtagacaccatcaggaaaaatgcatctccaggcctggcctacgtatttgctttccag
gatgatctgagtctaaaggatgtgaccgctcgctactgcgccaattggagctccatcgtt
cgaaaggcacgcgttgaaaagtgctggatcgatgaaaccatcgctccgtatctgggacgt
cgcaccaaaagggacatctgcgaggatgagcagctgcggcgcatacactcggagaagccc
cttcccaagtccatagccgaattcaaagatcatccgctgtatgttctcgaacggcacctt
ctgaagtttcagggcctctatccggcagatgcgccgactcttggctttatacgtggggaa
gctgtctactccagagattgcgtgcatcttctgcactcccgggaaatctggctcaagagc
gcccgcgtcgtgaagctgggtgagcagccctacaagattgtcaaggcgcgtcctaagtgg
gataagctcacgcgctctgttattaaagaccagccacttgagatattcggctactggcaa
acacaggactacgaacctcccaccgcggagaacggcattgtgccgcgcaatgcctacggc
aatgtggagctattcaaggcctgcatgcttcccaagaagacggtgcacctgaggctgccc
ggactgatgcgcgtttgcaagaagctgaacattgattgtgccaatgcagtgatcggcttt
gacttccaccagggcgcttgccaccccatgctagatggcttcgttgtctgcgaagagttc
cgcgaagtggtctgtgcggcttgggaagaagatcagcaggagcaggcgcgcaaagagcag
gagaagtacgagacccgagtctttggcaattggaagaagctcatcaagggtctgattata
cgcgagcgtctcaagaggaagtataatttctga
DBGET
integrated database retrieval system
