Drosophila miranda: 108158541
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Entry
108158541 CDS
T06132
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
dmn
Drosophila miranda
Pathway
dmn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108158541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmn03021
]
108158541
Enzymes [BR:
dmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108158541
Transcription machinery [BR:
dmn03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108158541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DUF4348
Motif
Other DBs
NCBI-GeneID:
108158541
NCBI-ProteinID:
XP_017146439
LinkDB
All DBs
Position
3:complement(10432392..10438057)
Genome browser
AA seq
1647 aa
AA seq
DB search
MGSKTPLDVHMFPSDLEFAVFTDQEIRKLSVVKVITGIAFDALGHPMPGGLYDIRMGSYG
RCIDPCGTCLKMQDCPGHMGHIELGTLVYNPFFIKLVQRLLCIFCLHCFKLQMKDHECEI
IMLQLRLIDAGYIIEAQELEIFKSEIVCQNSEELIKLDNGDAVHPRIAAMHELLLKSGTE
PTHSTKSTCSLRTAVTHSALQRPGKKCRHCNKSMRYVRYMHRRLVFYVTIADIKERLGDG
AETGGQNKVIFADECRRYLRQIYANYPDLLRLLMPVLSLSNTDAADSGYSPVDMFFMDTI
PVTAPRARPMNVVNGMVKGNPQTDIYVNIIENNNVLNVVLRHMRGNQEKLTEHALAAYQD
MKGSNAHEKLYNAWLSLQTSVDVLLDVNMSREVQSAEGLKQVLEKKDGLIRKHMMGKRVN
YAARTVITPDPNIDVDEIGIPDIFARKLSYPIPVTEWNVSDLRKMVMNGPDVHPGANYIQ
DSNGFTTYIPADNAAKRASMAKLLLSNPKDGVKIVHRHVLNGDCLLLNRQPSLHKPSIMA
HKARILRGEKTFRLHYSNCKAYNADFDGDEMNAHYPQSEVARAEAYNLVNVASNYLVPKD
GTPLGGLIQDHVISGVKLSIRGRFFNREDYQQLVFQGLSNLKGDVKLLPPALIKPAMLWS
GKQVLSTIIINLIPDGYELINLDSFAKIGGKNWNVARPRPALHGSNPQEHELSESQVQIR
RGELLVGVLDKQQYGATTFGLIHCMYELYGGDVSTRLLTAFTKVFTFFLQLEGFTLGVKD
ILVTGEADRKRRQIIQECRDVGNSAVAAALELGDVPPHDELAEQMEEAYVKDPKFRVLLD
RKYKSLLDGFTNDINKTCLPGGLITKFPSNNLQLMVLSGAKGSMVNTMQISCLLGQIELE
GKRPPLMISGKSLPSFTSFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLIDTAVKT
SRSGYLQRCLIKHLEGLSVHYDLTVRDSDNSVVQFLYGEDGLDILKSKFFNEKFCADFLT
QNASAILRPSLLQVMKDEEGLAKVLRHEKHIRSWEKKKPAKLRAAFTHFSEELREEVEVK
RPNEINAKTGRSRFDEGLLKLWKKADAEDKALYRKKYAPCPDPSVAVYKQDLYYGSVSER
TRKLIDDYARKQPSQKDTISDIMRMKSIKALAAPGEPVGLIAAQSIGEPSTQMTLNTFHF
AGRGEMNVTLGIPRLREILMLASSNIKTPSMDIPIRPGQQAQAEKLRIALNCVTLANLLE
SVHISTSLSLEPERAYEYELRFQFLPREVYKEDYGVRPKRIIKYMHQTYFKQLIRAILKV
SNAKKTSKIIEIDDKKEGENNKDEDNDLDNADYMGPNKGAADNDEDSSDDGGDDDTTGLK
LKQRKTDEKDYDDPDDVEELHDANDDDEEQEEDQDDEENGGDGNENADVDDKSVEKLLSN
QMVKDYTFDKENHLWCKVKLQLSVRYQKPDLTSIIRELAAKSVVHQVPHIKRAIIYKGND
DEQLLKTDGINMGEMFHHKKVLDVNRLYSNDIHAIARTYGIEAASQVIVKEVSNVFKVYG
ITVDRRHLSLIADYMTFDGTFQPLSRKGMEHSSSPLQQMSFESSLQFLKSAAGFGRSDDL
NSPSSRLMVGLPVRNGTGAFDLLTKIC
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgggttctaaaacgccgctggatgtccacatgttcccctcggacctggagtttgctgtt
ttcaccgaccaggagatacgaaagctgagcgtcgtaaaggtgataactggcatcgccttc
gatgccttgggtcatcccatgccaggtggtctgtatgatatacgcatgggttcgtacgga
cgctgcatagatccatgtgggacgtgcctgaagatgcaggactgtcccggccacatgggc
cacatagagctgggcactctcgtctacaatcccttcttcattaagctggttcagcgcctg
ctctgcatattctgtttgcattgcttcaagttgcaaatgaaagatcacgaatgtgagatt
attatgcttcaactgcgactcatcgatgccggatatattattgaggcgcaggagctggag
atcttcaaatcggaaatcgtctgtcagaacagcgaggagctgatcaagctggataatggc
gacgccgtccatccccgcatcgctgccatgcatgagctgctcttgaaaagtggaacggaa
cccacccattctacgaagtccacctgttccttacgcacggccgtcacacattctgccctg
cagcggcccggcaagaaatgcagacactgcaataagtcaatgcgctatgtgcggtacatg
catcggcgattggtcttctacgtgaccatagcagacatcaaagagcgcctcggtgatggc
gctgagaccggtggccagaacaaggtcattttcgcagatgagtgccgtcgctatctgagg
caaatatatgccaactatcccgatctattgaggcttttgatgcccgttctgagcttaagc
aacacggatgcagcagattccgggtactccccggtggatatgttcttcatggacaccata
ccagtgacggcgcctcgcgcccgtcccatgaatgtagtcaacggcatggtcaaggggaat
ccccagacggacatctacgtcaacatcatcgagaacaacaacgtcttgaatgtggtgctg
aggcacatgaggggcaatcaggagaagctcacggagcatgcattggccgcctaccaggat
atgaagggatcgaatgcccacgagaagctgtacaatgcttggctgtccctgcagacatca
gtcgatgtcctgctcgatgtgaatatgtcgagggaagtgcagtctgccgagggcctgaag
caggttctggagaagaaggatggtctcatcagaaagcatatgatgggaaagagagtcaac
tatgccgcacgtactgtcatcacgcccgatcccaatatagacgtggacgagatcggcata
cccgatatctttgcccgaaaactctcctaccccatccccgtaaccgagtggaacgtgtcg
gatctacgcaaaatggtaatgaacggaccggacgtccatcccggtgcgaactacatacag
gatagcaatgggttcaccacctacatacccgcggacaatgcagccaagcgagctagcatg
gccaagctgctgctgtccaatcccaaggacggcgttaagattgtccatcgtcacgtgctc
aacggagattgtctgctgctcaatcgtcaaccctcgctgcacaagccgtccatcatggcc
cataaggcgcggattttgcgcggcgagaagaccttccgcctccactactcgaattgcaag
gcatacaacgccgatttcgatggcgacgagatgaatgcccactatccgcagagcgaggtg
gcccgagcggaggcctacaatctggtgaatgtggccagcaactacctggtgccaaaggat
ggcactcccctgggtggcctcattcaggatcacgtcatctcgggcgtgaagctgtccatt
cgcggacgattctttaaccgcgaggactaccagcaactggtcttccaggggctctcgaac
ttgaagggagacgtcaagctgctgcctccggccctgatcaagccggccatgctctggtct
ggtaagcaggtcctgtccaccattattataaacctgattcccgacggctatgagctgatc
aatttagattcgtttgcgaagatcggcggcaagaactggaacgtagcacgtcctcgtcca
gcactgcatggcagcaatcctcaggaacatgagctgagcgagagccaggtgcaaataagg
agaggcgagcttctggtcggtgttctggataagcagcagtacggcgcgaccacttttggc
ctcatccactgcatgtacgagctgtacggtggcgatgtgtccacccgcttgctcacagcc
ttcactaaggtcttcacattctttctgcaactggagggctttactctgggtgtcaaggac
attctggtcactggcgaggcagatcgcaagagacgacagatcatacaagagtgtcgtgac
gtgggaaacagtgccgttgccgcagccttggagctgggcgatgtcccgccccacgatgag
ctggccgagcaaatggaggaggcctatgtgaaggatccgaaattccgagtgctgctcgat
cgcaaatacaaatcactgctagacggcttcaccaatgatatcaacaaaacttgcttgcct
ggtggcctcatcaccaagttcccctcaaacaatctgcagctgatggtgctgtccggtgcc
aagggatccatggtcaacaccatgcaaatctcctgccttctcgggcagattgagttggaa
ggcaaaagaccgcccttgatgatatcgggcaagtctctgccaagcttcacttcctttgag
acgtcacccaagtcgggtggcttcatcgatgggcgatttatgaccggcatacagccgcag
gactttttctttcattgcatggcaggtcgtgagggtctaattgatactgcagtgaagaca
tctcgttccggttacctgcagcgctgcctcatcaagcatctggagggcttgagtgtccac
tatgatctcactgtccgtgatagcgataacagtgtcgtgcagttcctctacggcgaggac
ggtctggatattctcaaatcaaagttcttcaacgaaaagttctgtgcggacttcctcacc
caaaatgcttcagccatcttgcggcccagcctgctgcaggtgatgaaggatgaggagggt
ctggccaaagtgctgcgccatgagaagcacatacggagctgggagaaaaagaaaccagcc
aagttgcgggccgctttcactcatttctctgaggagctgcgcgaggaggtagaggtcaag
cggcccaatgagatcaatgcgaaaacaggtcggagtcgctttgacgaaggtctgcttaaa
ttgtggaagaaggccgatgccgaggacaaggccttgtatcgcaagaagtacgctccatgt
cccgacccatcagtggccgtctacaagcaagatctttactacggcagcgtctcggagagg
acgcgcaaactcatcgatgactatgcgcgcaaacagccaagccagaaggacacaataagc
gacataatgcgtatgaagagcatcaaagcattggccgcgccgggagaacccgtaggcttg
attgccgcccaatcgattggagagccctccacacagatgacgctgaacactttccatttt
gccggtcgtggtgagatgaacgtaactctgggtattccccgtcttcgagagattctcatg
ctggcctcctcgaacataaagacgccctccatggacatacccatcaggccgggacagcaa
gctcaagccgaaaagttgcgcatagctctgaattgtgtgactctggccaatctcttggag
tccgtccacatcagcaccagtctgagcttggagccggaacgagcctacgagtatgagctg
cgcttccagttcctgcccagagaggtctacaaagaggactatggtgtgcgaccaaagcgg
attattaagtacatgcaccagacctacttcaagcagctaattcgggccatcctcaaagtt
tccaatgccaaaaaaacatcgaaaataatcgaaatcgatgacaaaaaagagggcgaaaac
aataaggacgaagataacgatctggacaacgcagattatatgggtccgaacaaaggcgct
gctgacaacgatgaagattcatcggatgatggcggcgatgacgacaccacaggactgaag
ttgaagcaacgcaaaacagatgaaaaggactacgatgatccggatgatgttgaagaacta
cacgatgctaatgacgacgatgaggagcaagaggaggaccaagacgacgaggagaacgga
ggagacggcaacgagaacgccgatgtagatgacaagtcggtggagaagcttcttagcaac
caaatggtgaaagattacacttttgacaaggagaatcatctgtggtgcaaggttaaactg
caactgagtgttcgctaccagaagcccgatctgacctccattatacgtgagctggcagcc
aagagtgtagtccaccaggtgccgcacattaagcgagccatcatctacaagggcaacgac
gatgagcaactcctgaagacggatggcatcaatatgggtgaaatgttccatcacaaaaag
gtattggatgtgaatcggttgtactccaatgatattcatgccatagcgcgcacttacggc
attgaggcagcgtctcaagtcattgtcaaggaggttagcaacgtgttcaaggtgtacggc
attacagtggatcgtcggcacctgtcgctgatagctgattacatgacctttgatggcacc
ttccaacctctgtcgcgcaagggcatggagcactcttcctctcctctccagcaaatgtct
ttcgagtcgagtttgcaattcttaaagagcgccgccggcttcggcaggtcggatgacctc
aattccccttcaagtcgcttgatggtcggcctccctgtgcgcaatggtacgggggctttt
gacttgttgacgaaaatatgttaa
DBGET
integrated database retrieval system
