Drosophila miranda: 108158704
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Entry
108158704 CDS
T06132
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
dmn
Drosophila miranda
Pathway
dmn03430
Mismatch repair
dmn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108158704
03460 Fanconi anemia pathway
108158704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmn03400
]
108158704
DNA repair and recombination proteins [BR:
dmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108158704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Invasin_D3
DUF5386
Kazal_C6
Motif
Other DBs
NCBI-GeneID:
108158704
NCBI-ProteinID:
XP_017146732
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All DBs
Position
3:16978454..16986275
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AA seq
884 aa
AA seq
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MAEKEENVELPAPTTAASGQIKAISKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLV
EIKMKDQGLQGVEVSDNGSGVVEANLEAMTAKYHTSKIREFVDLLGVETFGFRGEALSSL
CALSDMAIQTRHQSTDVGLKVELDHDGKIKKRSPCARAVGTTVTLTNLFSTLPVRRRDFT
RNIKKEFAKMCQILQAYCLVTKGVRIICSNQTPKGAKTVVLQTHGAQDVLANISAIFGAR
QVADIVPLKSPFEKGQLSEVGLRAELESSADAADTTCTQFSAEDVERLNQADFRLEGYIS
SCRHGAGRSSRDRQFFFVNARPCDPKNIAKVINETYHRYNVQQQPFIYLNIITARSDVDV
NLTPDKRQLLLNNERILLLALKKSLLETFGQTPSTFQMQNTTIVSMLEPRPKPQPEDASK
ASEEKDEEEDVPISSSQRFMDVLTQWRRTGDTQGTAPSAPIKRRCAESEELATRSMKMQK
IQDFLSQDSPKQQSSKGDSVSEEDVVDQPPKPTKEQANLDESFLNLKELETESKAYDLLT
QPAKATRIDCKVLTPIKSRLSIAEPKPEPAGSSQGSQETVSTMDQSDDDDHIELPTRIEF
DGGDDGGEEQPPANYKSGELRTTIEEIADSLRKQEQQQKERRTRAKLQRLRFKSEINPNQ
NNKAEDELQREIAKDDFARMDIIGQFNLGFIIVKLQDDLFIVDQHASDEKYNFETLQRST
QLEYQRLTVPQSLDLTAVNEMVLIDHLPVFEKNGFKFEINHEAPATKKVRLLGKPYSRQW
EFGKEDIDELIFMLQDAPEGTICRPSRVRSMFASRACRKSVMIGTALNRTTTMRRLITQM
GEIEQPWNCPHGRPTMRHLINITMLMDEEEDADAAEDPAHQKPQ
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaagaagagaatgtcgagctgccagcacccaccacagctgcatccggccag
ataaaagccatttccaaggatactgtgcacaaaatatgctccggccaggtggtgctcagt
ctggctgtggctgtcaaggagttagtggagaactccatcgatgcaggggctacactggtg
gagattaagatgaaggatcagggactgcaaggcgtcgaggtcagtgataatggcagcggc
gtggtggaggccaatctggaggcaatgactgcaaagtatcacacatcgaaaataagggaa
ttcgttgacctgctgggagtggaaacgtttggatttcgtggggaagcactcagttccctc
tgcgccctgtccgacatggccattcagacgcgccaccagtccaccgatgttggtctcaaa
gtggaactcgaccacgatggcaagatcaagaagcgctcgccttgtgcccgcgctgtaggc
accaccgtcactcttaccaatctatttagtaccctgcccgtgcgtcggcgcgactttacg
cgcaacatcaagaaggagttcgccaagatgtgtcagatcctgcaggcctactgcctggtg
accaaaggcgtgcgcatcatctgcagcaatcagacgcccaagggcgccaagacggtggtt
cttcaaacacatggcgcccaggatgtgctggccaacatatccgcgatatttggggcacgc
caagtggccgacattgtgccgctaaagtcccctttcgaaaagggccaactgagcgaggtc
ggactacgggctgagctagagtcctccgcggatgcagctgacacgacttgcacacagttc
agcgccgaggatgtggagcggctgaaccaggccgactttcgactggagggctatatatcc
agctgtcgccatggggcaggccgctccagcagagatcgccagttcttctttgtcaacgcc
agaccctgcgatcccaagaatatagccaaagtcatcaacgagacctaccatcgctacaac
gtccagcagcagccttttatctacctcaacattatcacggcccgctccgacgtggacgtt
aacctaacccccgacaagcgccaactgctgctcaacaacgagaggattctgctgctggcc
ctgaagaagtctctgctggagacctttgggcagacaccatccacattccaaatgcagaac
acaaccattgtgagcatgctggagccaaggccgaagccccagcccgaggatgctagcaag
gccagcgaggagaaggatgaagaggaagacgttcccatcagctcctctcagcgtttcatg
gatgtgctcacccagtggcgccgcacgggagacactcagggcactgctccgtccgctccg
atcaagcggcggtgtgccgaaagcgaggagttggccacccgctccatgaaaatgcaaaag
atccaggatttcctcagccaagattcgcccaaacaacagagttcaaaaggcgattcagta
tcggaggaggatgttgtcgatcagccgccaaagccgaccaaagagcaggccaatctggat
gagagtttcttgaacctcaaggagctggagacggagtcaaaggcctacgacctgttgacg
cagccagccaaggcaacccgcattgactgcaaggtcttgacaccaataaaaagtcgccta
agcattgcagagcccaagccagaacccgccggtagctcccagggctcccaagaaactgtc
agcaccatggatcagagcgatgatgatgatcacatcgagctgcccacgcgcattgagttc
gatggcggcgacgacggtggcgaggagcagccgccagctaactacaagagcggcgagctg
cggaccacaatcgaggagattgcagacagcctaaggaaacaagagcagcagcagaaggag
cgcagaacgagggctaagctgcagcgcctgcgcttcaaaagcgaaatcaacccaaatcag
aacaacaaggcggaagacgaactgcagagggagatcgccaaggatgactttgcccgcatg
gacattattgggcagttcaacctgggcttcataattgtcaagctgcaggacgatctattc
attgttgaccagcacgcctcggatgagaagtacaacttcgagacacttcaacgaagcacc
cagttagagtatcagcgtctgactgtgccccagtccttggacctgacggcggtcaacgag
atggtgctcatcgaccatctgccagtgttcgagaagaatggctttaaatttgagatcaat
catgaggctcccgccacgaagaaggtgcgactgctgggcaaaccctacagccgacagtgg
gaattcggcaaggaggacatcgatgagctcatcttcatgctgcaggatgcccccgagggc
accatctgccgaccctcgcgggtgcgctcgatgtttgcctctcgcgcttgccgcaaatcc
gtgatgattggcacggctctgaacaggacgaccaccatgaggcggctaatcacccaaatg
ggggaaattgaacagccctggaactgcccgcacggtcgccccaccatgcgtcatctaatc
aatatcacgatgctaatggatgaggaggaagatgctgatgcggcggaagacccggcccac
cagaagccccaataa
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