Drosophila miranda: 108158716
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Entry
108158716 CDS
T06132
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmn03021
]
108158716
03036 Chromosome and associated proteins [BR:
dmn03036
]
108158716
Transcription machinery [BR:
dmn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
108158716
Chromosome and associated proteins [BR:
dmn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
108158716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
S1
Tex_central_region
HHH_3
HHH_9
Tex_YqgF
Spt6_S1
Tex_N
OB_RRP5_4th
S1_RRP5
Med3
Motif
Other DBs
NCBI-GeneID:
108158716
NCBI-ProteinID:
XP_017146751
LinkDB
All DBs
Position
XL:complement(13022022..13029741)
Genome browser
AA seq
1850 aa
AA seq
DB search
MAEFLDSEAEESEEEEELELNERKKLKKLKAVVSDSSEEEEDDEERLREELKDLIDDRPI
EEEDGSGDSDTASGGGSGKKRKKHQDDDLDDRLEDDDYDLIEENLGVKVERRKRFKRLRR
IHDNESDGEEQHVDEGLAREQIAEQLFDENDESIEHRSERSPRHGEADAFDEEDSESDAD
DFIVDDNGRPIADKKKKRRPIFTDASLQEGQDIFGVDFDYDDFSKYEEDEYEDDTEGDEY
DEDMAGGDDHRVKKKKALKKKVAKKTIFDIYEPSELKRGHFTDLDNEIRKTDIPERMQLR
QVPVTPVPEGSLELDDEADWIYQYAFCKNTVSEQEKADSREKMRKPPTAVKKIKQTLEFI
RNQQLEVPFIAFYRKEYVKPELNVDDLWKVYYFDERWCQLNERKRKLKALFEKMRQFQLD
TLCADPDKPIPDDVRLMLDSDFERLNDVQSMEELKDVHMYFLLNYSHELPKMQAEQRRKL
LQERRDDRARRKAAAAENGDDLDAVPVEVDDDDDPELLLQEEQLKQAPNSSPYAVFRKAG
ICGFAKHFGLTPEQFAENLRDNYQRNEVTQESLGPLELAKQYLSPRFMTTEEVMHAAKYV
VARQLAQEPLLRKTMREVYFDRARIDIRPTKNGMVLIDENSPVYSMKYVAKKPVGDLFGD
QFIKLLMAEEEKLLEITFLEEFEGNANANGPPGDYVEEAKALYNLDQFSKHVLEWNALRA
ECVQLALQKWVIPDLIKELRATLHEEAQQFVLRSCTAKLYKWLKVAPYKPDLPQDYKYDD
WSTLRGIRVLGLAYDPDQSVAAFCAVTTVEGDISDYLRLPNILKRKTSHNAEEKGQKLAD
LRKLSEFIKMKKPHIVVIGAESRDAQMIQTDIKEILKELETTEQFPPIEVEIIDNELAKI
YANSKKGESDFKEYPPQLKQAVSLARKMQDPLVEYSQLCDADDEILCLRYHPLQERVPRD
MLLEYLSLEFINRTSEVGLDINMMVQNSRTVNLLQYTCGLGPRKGQALLKLLKQSNQRLE
NRTQLVTVCHLGPKVFINCSGFIKIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAID
AMEYDDEETNPAGALEEILESPERLKDLDLDAFAVELERQGFGSKSITLYDIRNELSCLY
KDYRSHFQKPSAEELFDLLTKETPDSFYVGKCVTAMVTGFTYRRPQGEQLDNANPVRNET
TGSWQCPFCHKDDFPELSEVWNHFDANSCPGQASGVRVRLDNGLPGFIHIKNLSDKQVRN
PEERVRVAQMIHVRIIKIDIDRFSVDCSSKTADLKDVNNEWRPRRDAFYDFVTEELDNRK
VSDAKAKALKRKTYARRVIAHPCFFNKSYAEVIAMLAEADQGEVAMRPSSKSAAHLTATW
KVADDIYQHIDVREEGKKNDYSLGRSLWIGTEEFEDLDEIIARYINPMACAARELIQYKY
YKKNATPANGNEREFMEQLLRDEKAKDPKKIHYFFTASKTIPGKFLLSYLPKTKARTEYV
TVMPEGYRFRGQVFDSVNSLLRWFKEHWLDPTASPAMNTPMHGMRPPAAILNSGGGGSST
GPYSISGSIAGSVSGGTPRSGISSADIRGSGGGGSSAYSISHSIGGGGGGGYGSSAAAAA
AHYGSSATPSFGGAAVNTPYTPSSQTPFMTPYTPHASQTPRYGHNVPSPSSQSSSSQQMR
HHHGHYGSGSGGTPRTYYDMGGAAAGGGYGMGQPPQQQHQQQRAKESLDWQLANDSWARR
RPPQQQQQQQQQPQQQQQQQSQQTSMGMGMNMGLGGMGMGLGINLGYSVSGTTPTNEYST
GNRNVAAGAGAGAGAAISSSKAASVRSTPRTNTSPHSMNLGDSTPLYDEN
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatttctggactctgaggccgaggaatcggaggaggaggaggaattggaacta
aacgaaaggaaaaagctgaagaagctgaaagccgtggtatctgacagcagtgaggaggag
gaagatgacgaagaacgtctacgtgaggagcttaaagatttaatagatgacagacccatt
gaggaggaggatggcagcggcgattcggacactgccagcggcggcggcagtggcaagaag
cgaaagaaacatcaggatgatgatctagacgatcgactcgaggacgatgattatgatctg
atcgaggagaatctgggggtcaaggttgagcgacgtaaacgcttcaagcgtctgagacgc
attcatgacaatgaaagcgatggcgaggagcagcatgtggacgagggtttggctcgcgaa
cagattgccgagcagttgttcgatgaaaacgatgagagcattgagcatcgcagcgagcgc
agtcctcggcacggcgaggcggatgcctttgacgaggaggattctgagtcagatgccgat
gattttattgtggacgacaatggccgtcccattgccgacaaaaagaagaaaaggcgtccc
atattcacagatgcatcgctgcaagagggccaggatatatttggtgtggactttgattat
gacgacttctccaaatacgaggaggatgagtacgaggacgataccgagggcgatgagtac
gacgaggatatggccggcggcgatgatcaccgggtgaaaaagaagaaggccctcaaaaag
aaggttgccaagaagacaatcttcgacatttacgaaccgagcgaactgaagcgcggccac
tttaccgatctggacaatgagatacgaaaaacagacatacccgagcgcatgcagctgcga
caggtgcccgtaacgcccgtgcccgagggttcgctggagctggacgacgaggccgattgg
atctatcagtatgcgttctgcaagaacacagtctccgagcaggagaaggccgacagtcgg
gagaagatgcgcaagccacccaccgccgtgaagaagatcaagcaaacgctcgagttcata
cgtaatcagcagctggaggtgccgttcattgccttctatcggaaggagtatgtcaagccc
gaactgaatgtcgacgatctgtggaaggtctactactttgatgagcgctggtgtcagctc
aacgagcgcaagcggaagctgaaggcgctcttcgagaagatgcggcaattccagctggac
acgctctgcgcggatccggataagcccatacccgacgatgtgcggctgatgctggacagc
gactttgagcggctcaacgatgtccagtccatggaggagctgaaggatgtgcacatgtac
tttttgctcaactattcacacgagctgcccaaaatgcaggccgaacagcggcggaaactg
ctgcaggagcggcgtgatgatcgcgccaggcgaaaggcagccgccgccgagaatggcgat
gatttggacgccgtgcccgtcgaagtggacgacgacgatgatccggaactgttgctgcag
gaggaacagctgaagcaggcgcccaacagcagtccctacgcggtgttccgcaaggcaggg
atctgcggctttgccaaacatttcggcctcacgcccgaacagttcgcagagaacctgcgc
gacaattatcagcgaaacgaggtcacccaggagagcctgggacccttggagctggccaag
cagtatctctcgccgcggttcatgaccaccgaagaggtgatgcatgccgccaagtatgtg
gtggcccgacagctagcccaagagccactgctgcgcaagactatgcgtgaggtgtacttt
gacagggcgcgcatcgacatacgacccacgaagaacggcatggtgctgattgacgagaac
tcgccggtttattcgatgaaatatgtggccaagaagccggtgggcgatctctttggcgat
cagttcatcaagctgctgatggccgaggaggagaaactgctggagatcaccttcctcgag
gagttcgagggcaatgccaatgccaatggcccgcccggcgactatgtggaggaggccaag
gccctctacaatctcgatcagttctccaagcatgtcctcgagtggaatgccctgcgggcg
gagtgcgtccagctggccctgcaaaagtgggtgatcccggacctcatcaaagagctgagg
gccaccctccacgaggaggcgcaacagtttgtgctgcgctcctgcaccgccaagctgtac
aaatggctaaaggtggccccgtacaagccggatctgccacaggactacaaatacgatgac
tggagcacactgaggggcatccgagtgctgggcctggcctacgatccggaccaatcggtg
gccgccttctgtgcggtgaccaccgttgagggggatatctccgattatttgcgtctgccg
aacatcctcaagcgcaagacctcccacaacgcggaggagaagggccagaagctcgcggat
ctccgaaagctgtccgaattcatcaaaatgaagaagccccacattgtggtgatcggcgcg
gagtcgcgggacgcccagatgatccagacggacatcaaggagatactgaaggagctggag
accaccgaacagtttccgcccatcgaggtggagatcatcgacaacgaactggccaaaatc
tacgccaactcgaagaagggcgaatcggacttcaaggagtacccgccacagctgaagcag
gccgtttcgctggcccgcaaaatgcaggatccactggtggagtactcgcagctatgcgat
gccgatgacgagatcttgtgcctgcgctatcatccgctgcaggagcgtgtgccccgcgac
atgctgctggagtatctcagcctggagtttatcaatcggacgagcgaggtgggcctggac
ataaacatgatggtccagaactcgcgcaccgtcaatctgctgcagtacacctgcggcctg
gggccgcgcaagggccaggcgctgctgaaactcctgaagcagagcaaccagcggctggag
aatcgcacccagctggtcaccgtgtgccatttgggcccgaaggtgtttatcaattgcagc
ggcttcatcaagatcgacaccagctcgttgggcgacagcaccgaggcgtatgtggaggtg
ctggatggctcgcgcgtccatccggagacgtacgagtgggcccgcaagatggccatcgat
gcgatggagtacgatgatgaggagaccaatccggcgggcgcactcgaggagatactcgag
tcgccggaacgtctcaaggatctcgatctggatgcgtttgccgtcgaactggagcgtcag
ggcttcggcagcaagagcatcacgctgtatgacatccggaacgaattgagttgcctgtac
aaggactaccggtcacacttccagaagcccagcgccgaggagctcttcgatctcctcacc
aaggagacgcccgactccttttacgtgggcaaatgcgtgacggccatggtcacgggcttt
acctatcgccggccccagggcgagcagctggacaatgccaatcccgtgcgtaatgagacc
acgggcagctggcagtgccccttctgccacaaggatgactttcccgagctatcggaagtg
tggaatcatttcgatgccaactcctgtcccggccaggcgtcgggtgtgcgtgtgcggctg
gacaacggcctgcccggctttatacacatcaagaatctgtccgacaagcaggtgcgcaat
cccgaggagcgcgtccgcgtcgcccagatgatccacgtgcggataatcaagatcgacatt
gatcgcttctccgtcgactgctcctcaaagacagcggacctcaaggacgtcaacaacgaa
tggcggccgcgacgcgacgccttctacgatttcgtgaccgaagagctggacaatcgcaag
gtgtcggacgccaaggccaaggccctcaagcggaagacctatgcgcgacgtgtgattgcc
catccctgtttcttcaacaagtcgtatgcggaagtcattgccatgctggcggaggccgat
cagggcgaggtggccatgcgacccagcagcaagtcggcggcccatttgacggccacatgg
aaggtggccgacgacatctaccagcacatcgatgtgcgggaggagggcaagaagaacgac
tacagtctggggcgcagcctctggatcggcaccgaggagtttgaagatctcgacgagatc
attgcccgctacatcaatcccatggcttgcgcggcccgtgagcttatccaatacaagtac
tacaagaagaatgcaacgccagcgaacggcaatgagcgggaatttatggagcagctgctg
cgtgacgagaaggccaaggatcccaagaagatccattactttttcaccgcctcgaagacc
ataccaggcaaattcctgctctcgtatctgcccaagacaaaggcgcgcaccgagtatgtg
acggtaatgcccgagggctatcgctttcgcggccaggtcttcgattccgtcaacagtctg
ttgcgctggttcaaggagcactggctggatcccaccgcctcgccggcaatgaatactccg
atgcatggcatgcgaccgcctgcggcaattctcaactctggcggaggaggatcctcgacg
gggccctacagcatatcgggcagcattgcgggcagcgtttccgggggtacaccgcgcagc
ggcatcagcagcgcggacatccgtggcagtggcggtggcggctccagtgcctactccatt
tcgcattccattggtggtggcggtggtggtggctacggctcctccgccgcagcggccgct
gcccactatggcagctcagcgacgccctcgtttggcggcgccgcagtcaacaccccctat
acgcccagcagccagacgcccttcatgacgccgtacacgccgcatgcctcacagacgcca
cgctatggccacaatgtaccgagccccagttcgcagtcatcgagcagccagcagatgcgg
catcaccatggacactacgggagtgggagtggcggaaccccaaggacctattatgatatg
gggggtgctgctgctggaggtggctacggcatgggccagccgccacagcagcaacatcag
cagcaacgtgccaaagagagcctcgactggcagctggccaacgattcctgggcgcgacga
aggcccccgcaacaacagcaacagcaacagcagcaaccacagcagcagcagcagcagcag
tcacagcaaacgtccatgggaatgggcatgaatatgggtttgggtggtatgggtatgggt
ctaggaataaacctcggttacagcgtctctgggacgacgcccaccaacgagtactcgaca
ggcaacaggaacgttgccgctggtgctggtgccggtgccggtgccgccatatcctcgtcc
aaagcagcatcggtgcgtagcacgccgcgcacaaatacctcgccgcactccatgaatctg
ggcgactcgacgccgctctacgatgagaactaa
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