Drosophila miranda: 108158734
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Entry
108158734 CDS
T06132
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dmn01009
]
108158734
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108158734
04131 Membrane trafficking [BR:
dmn04131
]
108158734
03036 Chromosome and associated proteins [BR:
dmn03036
]
108158734
Enzymes [BR:
dmn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108158734
Protein phosphatases and associated proteins [BR:
dmn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108158734
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108158734
Membrane trafficking [BR:
dmn04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108158734
Chromosome and associated proteins [BR:
dmn03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
108158734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
SR-25
Motif
Other DBs
NCBI-GeneID:
108158734
NCBI-ProteinID:
XP_017146830
LinkDB
All DBs
Position
XL:11058654..11065666
Genome browser
AA seq
1115 aa
AA seq
DB search
MSSPIVTRRGAQQAKIQTRAMAMKSSSNSTATAASSSSSGAIKSSSVGAELPKRSETLLE
AKRRARNMLKNQGNPPAMQETVTDIFQTAVKSRPLVRGETALVYHQSMEQHCCRWDPKHL
ECPDRFNRVLDRCNELKLLDRCLPVSARLATKQEILRLHTAQHFELLEQTSEVCDDQSME
ELSSRFDSIYIHPSTFQCSLLASGSTIDLVDSIITGKAQNGMAIIRPPGHHAMKAEFNGY
CFFNNVALAAQHALDVHKLERILILDYDVHHGQGTQRFFYNDPRVLYFSIHRFEHGAFWP
HLQESDYHAIGEGPGLGFNFNVPLNETGMGDGDYMAIFQQLLLPVAMEYQPELIIVSAGY
DAALGCPEGEMQVTPAFYAHLLNPLLRLADSRVAVVLEGGYCLESLAEGAALTMRTLLGD
PCPVLVEPLLPPKRSMSKSILNCIFAHRPYWRCLQLQGTYDPSELKTKDRNRDLHIVERA
WVGGPPPVTVYPTRDTSVQHLIPVAVVADNTARLHRLRLETILTVPAVRVCYAYNPEMME
HRNLDDLGHPEQPKRIQFIHKMHEDYQLLGRMKQLSARAATTDEICLAHSRSHVNTMRRV
LGRDKEDLQAQAATYNSVYLHPATFGCATLAAGSVLQAVDSVLRGESRSAICNVRPPGHH
AEPDQPHGFCIFNNVAIAAQYAIREFGLKRVLILDWDVHHGNGTQHIFESNPKVLYISVH
RYENGTFFPKGPDGNYDVVGKHAGAGFNVNIPWNKKGMGDLEYALAFQQIVMPIAYEFQP
ELVLVSAGFDAAIGDPLGGCKVSPEGYGLFTHWLSALAGGRIVVCLEGGYNVNSISYAMT
MCTKTLLGDPVPTPQLGVVALTRPPTTAFQSCLETLQCCVEVQRQYWKSLEFVGYRLPHG
YQIGENNNEDFLAASLLKLNISSDDAQGAAGGPTDGDQADPGQERPSDSKPKVKVKPPNH
STAAPEEMFAIPPSKTCPHMRMLRPELVPQSINTRAPCGECISRSENWMCLSCHYIGCGR
YVGRHMQRHCEALEHTLVMRLQDHAVWCYVCGVYLDNPRLFEYKNRAHQDKYGRPLAWRY
PCAKRADGCYPLDPESDSEEEADHIANGSYLQEAQ
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaccgatcgtaacgcgacgtggggcgcagcaggcaaagatacaaacccgcgcc
atggctatgaagtcgagttcgaattcgactgcgactgcggcatcgtcgtcatcgtcggga
gcgatcaaaagcagcagcgtcggcgccgagctgcccaaacggagcgaaaccctcttggag
gcaaaacgtcgcgctcgaaacatgctcaaaaaccaaggcaatccaccagccatgcaggaa
actgtgacggatatattccagacagctgtcaagtcgcggcctctggtgcgcggagaaacg
gctctggtctaccatcagtcgatggagcagcattgctgccgctgggatccaaaacatttg
gagtgtcccgatcggtttaatcgcgtcttggatcgctgcaacgagctgaagctattggat
cgctgcctgccagtgtccgccaggctggccaccaaacaggagatactccggctgcatacg
gcccagcattttgaactgttggagcagacgtccgaagtgtgcgacgaccagagcatggag
gagcttagctctcgctttgattcaatatacatacatccgtccacatttcagtgctctttg
cttgcaagcggatccaccattgatctggtggattctataattacgggcaaggcgcagaac
ggcatggccatcatccgaccgccagggcatcatgccatgaaggccgaattcaatggctat
tgtttcttcaacaatgtggccttggccgctcagcatgcccttgacgtacataagctggag
cgcatcctgatccttgactacgatgtccatcatggtcagggcacacagcgcttcttctac
aacgatcccagggtgctgtatttctctatacatcgcttcgagcacggcgccttctggcca
catctgcaggagtcggactaccatgccataggcgagggccctggcctgggcttcaacttc
aatgtgccgctcaatgagacaggaatgggcgacggggactacatggccatcttccagcag
ctgctactgcccgtggcaatggagtaccagccggaactgatcatcgtctcggccggctat
gatgcggccctgggctgtcccgagggtgaaatgcaggtgacgcccgccttctatgcgcat
ctgctcaatccgctgctccgactggccgactcccgtgtggccgtcgtgctcgaaggaggc
tactgccttgaatctctggccgagggagcggccctcacgatgcgcaccctgctgggtgat
ccctgccccgtgctggtcgagccgctgctcccgccgaagcgttcgatgtccaaatccatt
ctcaactgcatatttgctcaccggccgtactggcgttgcctacagctgcagggtacctac
gatccatcagagctgaagaccaaggatcggaatcgggacttgcatattgtagaacgtgca
tgggttggcggaccgccacccgttaccgtttatccgacgcgggacacctccgtgcaacac
ctcattcccgttgcggtagtggccgataacacggcccgattgcaccgactgcggctggag
accattctgacggttcctgcagttcgtgtgtgctacgcttacaatcccgagatgatggaa
caccgcaacctggacgacctgggccatccggaacagccgaagcgcatccagttcatacac
aaaatgcacgaggattatcagctgctcggccgcatgaagcagctgtctgcgcgggcggcc
accaccgacgagatctgtctggcgcacagtcgctcccacgtaaacacaatgcggcgggtg
ctgggccgagacaaggaggatctccaggcgcaggcagcgacctacaattcagtatacttg
catccggccacgtttggttgcgccaccctggccgctggatccgttctccaggcggtagac
agtgtgctccgcggggagtcccgcagtgcgatctgcaatgtccgtccgcctggccaccat
gcggagccggaccagccgcacggtttctgcatcttcaacaatgttgccattgccgcccag
tacgccatccgggagtttggcctgaagcgtgtgctaatcctcgactgggatgtccaccac
ggcaatggcacccagcacattttcgagtcaaatccgaaggtactgtacatcagcgtccat
cgctacgagaacggaacattcttcccgaagggccccgacggcaactacgatgtggtgggc
aagcatgcgggagccggctttaatgtcaatataccatggaataagaagggcatgggggat
ctggagtacgctttggccttccagcagatcgtaatgccaattgcgtacgagttccagccg
gaactggtgctcgtgtcggcgggcttcgatgcggccatcggggatcctctagggggctgc
aaagtctcgcccgagggctacggtctgttcacccactggctgtctgccctggccggtggc
cggatagttgtgtgcctcgaaggcggctacaatgtcaactccatttcgtatgcgatgacc
atgtgcacaaagacgctgttgggggatccggtgccgacgccacagctgggggtggttgcc
ctgacaaggccgccgacaacggccttccagagctgcctggagacgctacagtgctgcgtg
gaggtgcagcgtcagtattggaagtcgctggagtttgttggctaccggctgccgcatggc
taccagattggggagaacaacaacgaggattttcttgccgcttccttgctgaagttgaat
atttcaagtgacgatgcccagggcgcggcgggcggccccaccgacggcgatcaggccgat
ccagggcaggaacggcccagcgacagcaagcccaaagtcaaggtaaagccgcccaatcat
tcaacggccgcgccagaggagatgtttgccattcccccgagcaagacttgtccgcacatg
agaatgctacgaccggagctagtgccgcaatcaataaacacgagggcgccgtgcggcgag
tgcatctctaggtcggagaactggatgtgtttgagctgtcattatattggctgtgggcgc
tacgtgggccggcacatgcagaggcactgcgaggctctcgaacatacactggtgatgcgc
ttacaggaccatgccgtgtggtgctatgtgtgcggcgtttacctcgataatccgcgactc
ttcgaatacaagaatcgggcgcatcaggacaaatacgggagaccgctggcctggcgctat
ccctgtgcgaagcgtgccgatggctgttatccgttggatcccgaatcggattcggaggag
gaggccgatcatattgccaatgggagctatctccaggaggcccagtga
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