Drosophila miranda: 108159261
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Entry
108159261 CDS
T06132
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmn03036
]
108159261
03400 DNA repair and recombination proteins [BR:
dmn03400
]
108159261
Chromosome and associated proteins [BR:
dmn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
108159261
DNA repair and recombination proteins [BR:
dmn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
108159261
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_GCN1
MMS22L_C
HEAT_GCN1_2
Motif
Other DBs
NCBI-GeneID:
108159261
NCBI-ProteinID:
XP_017147891
LinkDB
All DBs
Position
3:8817372..8822828
Genome browser
AA seq
1216 aa
AA seq
DB search
MTDIVYPNGCRPLVEDLGTDELIRRLKTLANVLQTMDQDDNLYQQYIPLALHLLDDFFMQ
HTSRDVQLLIACCIADVLRVYAPEAPYKEQDQIKSIFKFFIKQLHGLKEPRDPSFKRYFY
LLENLAFVKSFNMCFELEDCQEIFQDLFSTIFKIVNNQHSAKITNFFLDVLSPLITEADN
LSVELLDLLLINIVEPNKSSNRCAAHLTEQLLAKTGDALESPIKMFFNRALVMDKPNNKL
SITNKIYDIIYEVNRINPDLLYSVLPQLENKLLSTDDAERLKATTLLSRMFSEKDSQLSQ
KYQNLLRTFLGRFCDISEAVRVKCVQSSMHFLLNHPHLEPDITEKLRLRNHDLDENVRHE
VVMAIVATAKREFSVVIEAPELLEIVRERTLDKKYKIRRDAMNGLAYIYKVAICEPNSLS
ADAKQRVDWIKNKILHGYYKVGLEDRLLVERLLITSLVPYKLGPEERMKKLYHLLGDLDA
NATKAFVELQKNQMKTRNTVSDWIKLHHSKEFTPRVLGQLAVKQTTISKLLPDPLKASEY
LTQFSNNLRKDAQLLRCINIVLKRDVSCRECADTMGTLLKKLGSHVQSNLYYNTVKMLIE
RVASVMVDKESIGVLIGLIDQCIQGGSICEEIGISSEEAGERGLKLLSMLSYVFSAHFFT
DTSLRHLIALLSYEHDYVAPLVLKTLTHLGRYQPLIDATPAILNELAPICRDFALIGTPK
QAKHAVRCIFVNSQSSAPTDGAGGGGSASTTTQTVHPIFNEIIEALRLKLTPNCEHQRTK
IVALGHIAYNMPQAFLTPIKNMIARRIVKELLIQEVPVQRDYDLPDDADWCAEEDLPPDT
LCKLDALKAMARWLLGLRTDEHAAQKTFRMLAAFVNQRGDLLAQNRLCGAEKSWLRLGAA
CAMLKVCEQKGVGDQYSAEQYLQLSQLMTDPVPQVREIFARKLHKGLGRSLPRNCLPLDF
MGLYVLAGLETDRKLQDLVRHYVDTDVNKRREYLKTVAMTSPDSSTESQSLHILPDYMLA
FAIPVLVHDPGYTNHEDYVQLRKMEKCLRFILEPLMAKRESFVYGFYKQLLQLIKHREFS
QGSDKRDNYKMWALCDLAMYIIDSKMGHISESNSNTFSMPLALPEMYYKQPAAANFQNNE
VYIPLDVYTLGAKVNKATTTAMASSRAVAAPKRPAEPSLSDDEDPQENNLFDNIRAADTT
EPTAKRTRGGAGAAKS
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgacggacattgtttatccgaacggctgtcggccattggtggaagacctgggcacagac
gagctcatacgccgccttaagacactcgccaatgtcctgcagaccatggaccaggatgac
aatctctatcaacagtatataccattggcactccacctgctggacgacttctttatgcag
catacatcccgcgatgtccaactgctgatagcgtgctgcatagcggatgtattgcgcgta
tatgcgcctgaggccccctacaaagagcaagatcaaatcaaaagcattttcaagtttttt
atcaaacaattgcacggtctaaaggaaccccgcgatccgtccttcaagcgttacttttat
ctattggagaacttagcctttgtcaagtctttcaacatgtgcttcgagctcgaggactgc
caggaaatcttccaagacctgtttagtaccatttttaaaattgtgaacaatcagcacagt
gccaagatcacaaactttttcctggacgtgctgagtcccctgataaccgaggctgacaat
ttgtccgtggaacttctggacctcttactgattaacatagtggaaccaaataaatcaagc
aacagatgtgctgcacatctaaccgagcaactgctcgccaagaccggtgacgcattggag
tccccaatcaaaatgttctttaaccgtgcattggtcatggataagccgaacaacaaactg
tctattacaaacaaaatctatgatatcatctatgaggttaatcgcatcaatcccgatctt
ctgtactccgtgctgccccaattggagaacaaactactgtccactgatgatgcagaaagg
ctgaaagccaccacgttgctgtcgcgcatgttctccgagaaggactcgcagctgtcgcag
aaatatcaaaacctgttacgcaccttcttgggccgattctgcgatatctcggaggcagtg
cgtgtcaagtgcgtacaatcgtccatgcattttcttctaaatcacccacatctggaacct
gatataacggaaaagttgcgccttcgtaatcacgatttggacgaaaatgtgcgccacgaa
gtggtcatggccattgtggcgacggccaagcgggaattcagcgtagtaatagaggcgccc
gaactactcgagattgtgcgcgagcggacgctggacaaaaaatacaagattcgacgagac
gccatgaatggcctggcctacatctacaaagtggccatctgcgaaccaaatagcttgagt
gctgatgccaagcaaagagtggactggatcaagaacaagatactgcacggctactacaag
gtgggtctggaggatcgcctgctagtagagcgtttgctcatcacctcattggttccctac
aaactggggcccgaggagcgcatgaagaaactgtaccatctgctgggcgatcttgatgcg
aatgctaccaaggcctttgttgaactgcaaaagaatcaaatgaagacacgcaacacggtt
agcgattggatcaagctgcatcactccaaggagtttactccccgggtgctcggtcaactg
gctgttaaacagaccaccatttccaaattgcttcccgatcccttgaaagcttccgaatat
ctcacacaattcagtaacaatctacgcaaagatgcccagctgttgcgctgcatcaacatt
gtcctgaagcgcgatgtcagctgtcgtgagtgtgccgacactatgggcacccttctgaaa
aagctgggctcccacgttcaatcaaatctgtactacaatacggtcaagatgctgattgag
cgcgtggcctccgtgatggtggataaggagtctattggtgtgctgataggcctgattgac
caatgcattcagggtggttctatatgcgaagagattggcatatcgtccgaggaggcaggc
gagcgcggactcaagcttctgagtatgctctcatatgttttctcggctcactttttcacc
gatacctctttgcgtcatttgatcgccttgctcagctatgagcacgattatgtggcgcca
ctggtgctgaagaccctcacgcatttgggacgctatcaaccgttgattgacgccacgccg
gcgattctcaatgagttggctccaatctgccgagactttgccttaattggaacacccaag
caggccaagcacgcggtacgttgtattttcgtcaacagtcaatcgtcggcgcccaccgat
ggagctggaggtggcggaagtgcatcgaccacgacacagacggtgcatcccattttcaac
gagatcattgaggcactgcgtctgaagctgacaccaaattgcgagcatcagcgcacgaaa
atagtggccctgggccacattgcctacaacatgcctcaggcgttcctcacacccatcaag
aacatgattgcccgccgtattgtcaaggagctgctcattcaggaggtgccagtgcagcgg
gactacgatctgcccgacgatgctgattggtgtgccgaagaagatctcccgccagacacg
ctgtgcaagctggatgccctaaaggccatggcccgctggctgctcggcctgcgcacggat
gaacacgctgcccagaagacattccggatgttggccgcctttgtcaatcaacgtggcgat
cttctcgcccagaatcgtctctgtggagctgagaagtcctggctacgcttgggcgctgct
tgtgcgatgctcaaggtttgtgaacagaagggcgtaggcgatcagtacagtgccgagcag
tatttgcagctctctcagcttatgactgatccggtgccacaggtgcgggaaatctttgca
cgcaagctgcacaagggcctaggcaggagcctgccaaggaattgcttacccttggacttt
atgggcttgtacgtgcttgctggcctggaaactgacagaaaattgcaagacctggtgcgt
cactatgtggacacggatgtgaacaaacgtcgggaatatctcaagactgttgctatgacc
tcccccgacagctcaacggaatcacaatcgctgcacattctacctgactacatgctggct
tttgccattcccgtgctggtccacgatccaggctatacgaatcacgaggactatgttcag
ctgcgaaaaatggagaaatgtctgcgcttcatactggaaccgctgatggccaagcgggaa
tccttcgtctatggtttctacaagcaactccttcagctgataaagcaccgcgaattcagt
caaggttccgacaagcgcgataactataaaatgtgggcactctgcgatctcgccatgtat
attatcgactcgaagatgggacacatcagtgaaagcaactcgaacacattctccatgcca
ctggcattgccagaaatgtattataagcagcctgccgctgcaaacttccagaacaacgag
gtctatataccgctggacgtgtatacgttgggcgccaaagtgaataaagccaccacgaca
gcaatggcatcgtctcgagcggttgctgctccgaaaaggcccgcagagccgtccctctca
gatgatgaggatccacaggagaacaatctttttgataacatccgagcagcagacacaaca
gagcctactgccaagcgaacgcgtggaggagccggcgcagccaaatcgtag
DBGET
integrated database retrieval system
