Drosophila miranda: 108159332
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Entry
108159332 CDS
T06132
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
dmn
Drosophila miranda
Pathway
dmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108159332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmn03041
]
108159332
Spliceosome [BR:
dmn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108159332
Complex C
U5 SnRNP specific factors
108159332
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
108159332
NCBI-ProteinID:
XP_017148017
LinkDB
All DBs
Position
3:complement(3923719..3932795)
Genome browser
AA seq
2397 aa
AA seq
DB search
MSIPPYMIPQNAWAAQLMAQQAYAAAHAQQAQLHAQQQMANQIQQIPPPGAPLPPASGHS
NGIPIPAGVQGQSGLGQIPTPKPDILTEDKLQEKALKWQNLQSKRFAEKRKFGFVDTQKE
DMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVQVL
YHITGAITFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYA
DNVLDVEPLEAIQIELDNDEDNAVYKWFYDHRPLVDTPYVNGSTYRKWNLSLPQLATLYR
LANQLLTDLVDNNFFYLFDPKSFFTAKALNMAIPGGPKFEPLIKDNNVGDEDWNEFNDIN
KVIIRQPIRTEYRIAFPYLYNNMPHFVHLSWYHTPNVVYIKTEDPDLPAFYFDPLINPIS
HRNVNSKLQEPLPDDDEDFTLPDEVQPFLQDTPLYTDNTANGIALLWAPRPFNMRSGRSR
RAIDVPLVKCWYKEHCPPGHPVKVRVSYQKLLKYYVLNALKHRKPKPQKKRYLFRSFKAT
KFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSR
FGNAFHLCREILRLTKLIIDSHVQYRLNNVDAFQLSDGLQYIFAHVGQLTGMYRYKYKLM
RQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQ
FEGRHSKGVAKTVTKQRVESHFDLELRASVMHDIVDMMPEGIKQNKARTILQHLSEAWRC
WKANIPWKVPGLPIPIENMILRYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRL
TRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTTVHWLESRRFAPIPFPPLSYKHDTKLL
ILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFM
DLYSHLIPVYEVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPSDTEPPPLLAYKWCQGI
NNLQEVWDVGEGECNVLLESRFEKLYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINY
KDMNHTNSYGIIRGLQFSSFITQYYGLVLDLLVLGLHRSSEMAGPPQMPNDFLTFQDAVT
ETAHPIRLYCRYVDRIHLFFRFSAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDAR
MRLMKHDVNLGRAVFWDIKNRLPRSVTTIGWESTFVSVYSKDNPNLLFNMSGFECRILPK
CRTQNEEFTHRDGVWNLQNEITKERTAQCFLRVDDESLGRFHNRVRQILMASGSTTFTKI
VNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTP
KELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYIQPWESEF
IDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRIR
TEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWE
GLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTG
IFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKS
YKMNSSCADILLFPAYKWNVSRPSLLADTKDTMDNTTTQKYWLDIQLRWGDYDSHDVERY
ARAKFLDYTTDNMSIYPSPTGILIAIDLAYNLHSAYGNWFPGCKTLIQQAMAKIMKANPA
LYVLRERIRKALQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLT
TKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPK
QIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNL
YDDWLKTISSYTAFSRLILILRALHVNTERTKIILKPDKTTITEAHHIWPTLTDEEWIKV
EVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQNQL
TATTTRTTNKHGDEIITSTTSNYETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKE
TGYTYILPKNILKKFVTISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQTINL
PNTLPTHQYLKDMEPLGWIHTQPNELPQLSPQDITTHAKIMQENSNWDGEKTIVITCSFT
PGSCSLTAYKLTPSGFEWGSKNTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQSSW
NYNFMGVRHDPNMKYELQLANPKEFYHELHRTSHFLLFSNLEDGGDGAGADREDVYA
NT seq
7194 nt
NT seq
+upstream
nt +downstream
nt
atgtccattccgccgtacatgataccgcaaaatgcatgggccgctcaattgatggcccag
caggcatacgcggctgcacacgcacagcaggcacaattgcatgcgcagcagcagatggcc
aaccagatacaacaaataccgccaccaggagcacccttaccgccagccagcggccattct
aatggcataccaattccggccggagtccaggggcagtctgggctggggcaaattcccacg
ccaaagccggacatacttacggaggataaactgcaggagaaggcgctaaagtggcagaat
ctgcagtccaagcgtttcgctgagaagcgaaagttcggcttcgtcgacacacagaaggag
gacatgccgccggagcatataagaaaaattatacgcgatcatggtgacatgacctcgcgc
aagtatcggcatgacaagcgggtttatttgggcgctctgaagtacatgccacatgcagtg
ctgaagctgctggaaaatatgcccatgccatgggagcaaatccgggacgtacaggtgctg
taccatatcactggtgccataacctttgttaacgaaataccatgggttattgagccggtt
tacattgctcagtggggaacaatgtggataatgatgcgtcgcgagaagcgtgatcgtcgc
cacttcaagcgtatgcgatttccgccgtttgacgatgaagaaccgccgctggactatgcg
gacaacgtactggatgtggagccattggaagccattcaaattgagctcgataatgatgaa
gacaatgccgtgtacaaatggttctacgaccatcgtcccctcgtagacacgccctatgtg
aatgggtccacctaccgcaagtggaatctgtccctgcctcaattggctactctttatcgc
ctggcgaaccagttgctcacggacctggtcgacaacaacttcttttacctatttgacccg
aagagtttctttaccgcgaaggctctgaacatggccataccgggcgggcccaaattcgag
ccactcatcaaggataataatgttggcgatgaggactggaacgagttcaacgacataaat
aaggtgatcatccgccaaccgattcgcacggagtatcgtattgcttttccctacctgtac
aacaatatgccgcactttgtgcatctaagctggtatcacacacccaacgtggtctacatc
aagactgaagatcccgatttgcctgcgttttattttgatccgctcatcaatcccatttcg
catcgcaatgtaaattccaagctgcaggaacccctgcctgatgacgatgaggactttacg
ctcccggatgaagtgcagccgttcctgcaggacacgccgctctacaccgacaacaccgcc
aatggaattgctttgctatgggctccgcgccctttcaacatgcgttccggtcgctcccgt
cgagccattgatgtgccgttggtcaagtgctggtacaaggagcactgtccacctggccat
ccggtcaaggtgcgcgtcagctatcagaaattgctgaaatattatgtactaaatgctctg
aagcaccgaaagcccaagccgcaaaagaaacgatacctgttccggtccttcaaggccaca
aagttcttccagaccaccacgttggattgggttgaggctggattgcaggtgtgccgtcag
ggatacaacatgctaaatctcttgattcatcgcaaaaatcttaactatttgcatctggac
tataatttcaacttgaagccggtcaagacattgactaccaaagagcgcaaaaagtcacgt
ttcggcaacgcgtttcatttgtgccgagagatcctgcgtctgaccaagctcatcatcgac
tcccacgtgcagtatcgcttgaataatgtggatgctttccagctatccgatggcctgcag
tacatattcgcgcatgtcggtcagctcactggcatgtatcgttataagtacaagctgatg
aggcagataagaatgtgcaaggatctgaagcatttgatctactaccgcttcaacacggga
cccgtgggcaagggacccggttgtggtttctgggcacccggatggcgggtgtggctattc
tttatgcgaggcatcactcccctgctggaacgctggctgggaaatctgctgtcccgtcag
ttcgaaggacgccactccaagggcgtagccaaaaccgtgaccaagcagcgcgtcgagtcg
cacttcgatctggagctgcgagcctctgttatgcacgacatcgtggacatgatgcctgag
ggcattaagcaaaacaaggctcgcactattctgcagcatctgtcggaggcttggcgctgc
tggaaagccaacattccgtggaaggtgcccggcctccccatacccatcgagaatatgatc
ctccgctatgtgaaaatgaaggcggactggtggacaaacacggcccactacaaccgagag
cgcatccgacgaggtgctaccgtggataagaccgtatgtaagaagaatctgggccgcctc
actcgtctctacctgaaggcggagcaggaaagacaacacaactacctcaaggatggtcca
tacatatcgccagaggaggcggtggccatctacaccaccacagtgcactggctggagtca
cgtcgctttgcgcccatcccattccctccgctgtcctacaagcacgacacaaaattgctg
atccttgcactcgagcgactaaaggaggcctacagcgtgaagtcgcgcttgaatcaaagc
cagcgtgaggagcttggtctcatcgaacaagcatacgataatcctcacgaggcattgtct
cgtatcaagcgtcatctgctgacgcagcgggctttcaaagaggtggggattgagttcatg
gacctgtacagccatctgatacccgtgtatgaggtggaaccgctggagaagatcacggac
gcatatctcgaccagtacctctggtacgaggcagacaagcggaggctgtttcccccctgg
atcaagcccagcgacacagagcccccgccgctcctggcctataagtggtgtcaaggcatc
aacaatcttcaggaggtctgggatgtgggcgagggcgagtgcaatgtgctgctggagtcg
cgctttgagaagctatacgagaagattgacttgaccctgcttaaccgtcttctgcgcctg
atcgtggaccataatatcgccgattatatgacggccaagaacaatgttgtgatcaactac
aaggacatgaaccacaccaacagttatggcatcatccgtggcctgcagttctcctcgttc
ataacgcaatactatggcttggttctggacctcctggtgctgggcctgcatcgatccagc
gagatggccggacctccgcaaatgcccaatgattttcttacctttcaggacgcagtcacg
gagacagcacatcctattcgactgtattgtcgctacgtcgatcgcatacacttgtttttc
agattctcggcggaggaggcgcgagacctcatccagcggtatctcaccgagcatcccgat
cccaacaatgaaaacattgtcggctacaataacaagaaatgctggccccgcgatgctcgt
atgcgtttaatgaaacacgacgtcaatctaggccgcgccgtcttctgggacattaagaac
cgcttgccgcgctctgttaccaccattggctgggaaagcacctttgtttcggtctattcc
aaggacaatccgaacttgctgttcaacatgagcggctttgagtgtcgaatcttgccaaag
tgtcgcacccaaaacgaagagttcacacatcgcgatggcgtgtggaatctgcagaacgaa
ataaccaaggagcgcacagctcaatgcttcctgcgtgtggacgatgaatcgctgggacgc
ttccacaatcgggtgcgccagatcttgatggcttccggttccaccacgtttacaaagatt
gttaacaaatggaacacggccctcattggcctgatgacgtacttccgcgaggctgttgtc
aatacccaggagttgctggatctactggtcaagtgtgagaacaagattcagacgcgcatc
aagattggccttaactcgaaaatgccctcgcgctttccgcccgtcgtgttctacacccca
aaggagctgggaggtctcggcatgttgagcatgggccacgttctcattccgcaatccgat
ctgcgctggtccaagcagacggatgtgggaataacccacttccgatcgggcatgtcccat
gacgaggatcagcttattccgaatctgtatcgctacattcagccgtgggagagtgaattc
atcgattcgcagcgcgtctgggcggagtatgcgctgaagcgccaggaggcaaatgctcag
aaccgtcgccttacgctggaggacctcgaggacagctgggatcggggtattcctcggatc
aacacgcttttccagaaggaccgccacactctggcctatgacaagggctggcgcatacgc
accgagttcaagcagtatcaggtgctgaagcaaaaccccttctggtggacccatcaacgc
cacgacggcaagttgtggaacctgaacaactatcgcacggatatgatccaagcgctgggc
ggcgtggagggaattctcgagcacactctgttcaagggcacctatttccccacctgggag
ggtctgttctgggagaaggcctctggcttcgaggagtccatgaagtacaagaaactgacc
aatgcacagcgctctggtctgaatcagatcccgaatcgtcgcttcacactctggtggtcg
ccgacgatcaaccgcgccaatgtctatgtgggcttccaggtgcagttggatctgactggc
atattcatgcatggcaaaattccgacgctcaagatttcgctgattcaaattttccgtgcc
catttgtggcagaagatacacgagtccattgtgatggacttgtgccaggtgtttgatcag
gagctggacgctcttgaaatcgaaacggtgcagaaggagacgatccatccgcgtaagtcc
tacaagatgaactcctcctgtgccgacattttactcttccccgcctacaagtggaacgtg
tcacgaccctctctgttggccgacaccaaggacaccatggacaacacgaccactcagaag
tattggctagacattcagctgcgctggggagactatgattcccacgatgtggagcgttac
gcgagggccaagttccttgattacaccacagacaacatgtccatttatccctcgcccacg
ggtatcctgattgccatcgatctggcctacaatctgcactcagcatatggaaattggttc
cctggctgcaagactctcatccagcaggccatggccaaaatcatgaaggccaatccggcc
ctctatgtcctgcgagagcgcatccgcaaggctctgcagctgtactcctcagagccaacg
gaaccctacttgagctcacagaactatggcgaacttttctcaaatcagatcatctggttt
gtcgacgacaccaacgtgtaccgcgtcaccatccataagacattcgagggcaatctgaca
acgaagccgataaacggcgcaatctttatattcaatccccggacgggccagcttttccta
aagattatccacacttcggtatgggcggggcagaaacgtttgggtcagttggccaagtgg
aagacggctgaagaggtggctgccctgattcgctcgctgcccgtggaggagcagccgaaa
cagatcattgtgacgcgcaagggtatgcttgatcctctcgaggttcatttgctcgacttt
cccaacatagtcatcaaaggctctgagctgcagttgcccttccaggcctgcttgaaagtc
gagaagtttggtgatctgattctgaaggccaccgagccccaaatggtgctctttaatctt
tacgacgactggctaaagacaatttcctcgtacacggcgttcagccgtctcattttgatc
ctacgagccctgcatgtgaatacggagcgcactaagatcatcctaaagccagacaagacc
actattaccgaggcccatcatatctggccaacattgacggatgaggagtggatcaaggtg
gaggtgcagctcaaggatctcattttagccgactacggaaagaagaacaacgtgaacgtg
gcctcactcacacagtcggagatccgcgacattattctcggcatggagatcagtgcgcca
tcggcgcaacgtcagcagatagcagagatcgagaagcagacaaaggagcagaatcaactg
acggcgaccaccacgcgcaccacaaacaaacacggcgacgagatcatcacttccaccaca
tccaattacgagacgcagactttcagctcgaagactgagtggcgcgtgcgagccatctct
gccacgaatctgcatttgcgaacgaatcacatatatgtcagctccgatgacatcaaggaa
actggctatacttacattctgcccaagaacatactcaagaagttcgtcaccatctccgat
ttgagagcgcagattgcgggatatctttacggcgtaagtccgccggacaacccgcaggtg
aaggagattcgctgcattgtgatgcctccacaatggggcacgcaccagacaattaacctt
cccaacaccctgcccacccatcagtacctcaaggacatggaaccgttgggctggatccac
acgcagcccaacgagttgccgcagctatcgccgcaggacatcacgacccatgccaagatc
atgcaggagaactccaactgggacggcgaaaagacgattgtaattacctgctccttcact
cccggctcttgctcgctgaccgcttacaaactgaccccatcgggcttcgagtggggctct
aagaacacggacaagggaaacaaccccaagggctacttgccctctcactacgaaagagtt
cagatgctgctgtcgaacaagttccttggcttcttcatggtgcccgcgcagagcagctgg
aactacaatttcatgggagtgcggcacgatcccaacatgaagtacgaactgcagctggcc
aacccaaaggagttctaccacgaactgcaccgcacgtcgcacttcctgcttttctcgaac
ctcgaggatggtggcgatggcgccggcgcggatcgtgaggatgtctatgcgtag
DBGET
integrated database retrieval system
