Drosophila miranda: 108159661
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Entry
108159661 CDS
T06132
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108159661
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108159661
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3730
Focadhesin
T2SSM_b
Motif
Other DBs
NCBI-GeneID:
108159661
NCBI-ProteinID:
XP_033246184
LinkDB
All DBs
Position
3:23029406..23035941
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AA seq
1202 aa
AA seq
DB search
MEEFSSIKPNSSVVKLAACLEKVYNKIVESREKQVAEHQIKEIDFLKTQCKHEHMQLSLM
SCQTLVRLVDEGVLDANSVQNTLLSMLGNAGPMHFAIITESIVGLQLLNLKRKTSLLKEQ
ETYQCSYGLKTQQHPLISLLQHSSVNMNDVSNKIIGICQHHDKSIRNHSIEYLRPVFLYV
LCTPQTLHDVKPIWTCLLGLSKSQPEARALMQELLSWSKFNNASTCLSTSILVIEAIDYF
LQQSDHAQSIDLCIYQACLIKQLANYGIDPRPSLQCLLRVLHATREHTRNHYHVLLVLLA
EVLHVLSPFYLADLLRIIAFVVVQERCGHEYILNMCLDGIIQWMSQTAFIHAEGLALANQ
IVQRVLDLQQSDEGERISTKQLKPAHMRNYHPDIAIAFDLANLVESFDASENQDVFAFVD
ALNVKSNTVFCQRLHLFLRALFLSRQPPVDCWFKIYEVILQTIKVNEGIAYDFLMTYIFK
LAHENNPELQLELLRGLPHFAVSKDNVPMILNTIRNLSTENGTFCVDLYLRLWRVESRTY
PFLLKQVAQPLPEGDKRWELQVARAHAMREICQEKPTLHGSELLPHLSNTLNSCTDESGD
LATSLALDALYALCDSHTVNIASTWHALGSKFRGEQRPQTLRSLYHFFGLVPLLQTPTLE
YEKVADDALEQLWQAISRPGTDAAQVRNALAALKSYEPGSTLNLRHIPAQFRFEIVGGAV
GGLSGREVVDLQEETVPGEVWVQLLQKIRPECGDAAADLISHHISNEINGFRSGVYRLPE
GKPEPRKLVGLFGTSPLRAVTNYMVSQARFGDYVSEPYAVTFALRALSNKFPKPIPPLDW
SCLTSFFHLSFDARKYCIMIAKNQASSSGTAKRLLENFLVEFEPNCFEEDLLLLFSLLPE
IASNVGLQIIKNFAEKVAVYCFKESQINDFVEGCLFEKFLDSVKYIFTGKCDLPPEVLDV
FTLIVERYMDSMNLDSRLFERYTEVVAVLHPNAIDGLTTPANWWETPIGKLKKATIIRCY
LVLYNEKLPNPLKWLTPIIDAYEKRTEERSFFYRHLAATLYAFGSDEHACNWIMEIFLEI
QMLLAEASNKEKVNRALYLLDIFVLAVDVLSGCAVLLGSVDVVATDDKQRLNLFPESLQY
LCDHIFWKDHEAKVYEFLFNLYKHSSMPSDYADVFKEAIICSRNKPYFDHKGVWTKYVGL
RK
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttcagcagcataaaacccaacagctcggtggtcaagctggccgcctgcctg
gagaaggtctacaacaaaatcgtcgagagccgggagaagcaggtggccgaacatcaaatc
aaggaaattgactttctcaagacacaatgcaagcacgagcacatgcagctcagtctgatg
agctgtcagaccctggtgcgcctggtcgacgagggtgtgctggatgccaacagtgtacag
aacacactcctctccatgctgggcaatgcaggtccgatgcactttgccatcatcacagag
agcatagtgggccttcagctgctcaatctgaagcggaagacatcgctgctgaaggagcag
gagacttatcagtgctcgtatggcctgaagacgcaacagcatccactgatatctctgctg
cagcactccagcgtcaacatgaatgatgtgagcaacaagatcatcggcatctgccagcac
catgacaagagcatacgcaatcatagcattgagtatttgcgtcccgtgttcctctatgtg
ctgtgcactccacagacgctgcacgatgtcaagccgatctggacttgcctgctcggcctg
agtaagagccagccagaggccagagccctgatgcaggagctgttgtcgtggagcaagttc
aacaatgccagcacctgtctatccaccagcatcctggtgatcgaggccatcgattacttc
ctgcagcagtcggatcatgcccagtccatcgatctgtgcatctaccaggcttgcctgatc
aaacagctggccaactacggcattgatcctcgtcccagtctgcagtgcttgcttcgcgta
ttgcatgcgactcgggagcatacgcggaatcactaccatgtgctcttggttctgctggcg
gaagtgctgcacgtcttgtcccccttctacttggccgacttgctgcggatcattgccttc
gtggtcgtgcaggagcgctgtggccatgaatacattctgaacatgtgtctggatggcatc
attcagtggatgtctcagactgcattcatacacgccgaggggctggctctggctaaccag
atagtgcagcgtgtgctcgacctccaacagtcggatgagggcgagcggatatccaccaag
caactgaagccggcccacatgcgcaactatcatccggacattgcgattgcatttgatctg
gccaatcttgtggagtcgttcgatgcctccgagaatcaggatgttttcgcctttgtcgac
gccctaaatgtcaagtcaaacacggtcttctgccagcgcctccatctcttcttgcgcgcc
ctctttctgtcccgacaaccgcccgttgactgctggttcaagatctacgaggtgattctg
cagaccattaaggtaaacgagggcatcgcctacgacttcctcatgacctacatcttcaag
ctggcccacgagaacaatcctgagctgcaactggagttgcttcgaggtctgccccatttt
gccgtatccaaggacaacgtgcccatgattctgaacaccattcgaaatctgtccaccgag
aatggtaccttctgtgtggacctgtatctacgactgtggcgcgtggagtcgcgcacctat
cccttcctgctgaagcaagtggctcaaccgctgccggagggcgataagcgctgggagctt
caagtagcccgagcacatgccatgcgggaaatctgccaggaaaagccaacattgcatgga
tcggagctgctacctcaccttagtaatacgttaaacagctgcaccgatgaatcgggggat
ctggctacgtctctggcgttggatgctctttatgccttgtgtgacagccacactgtcaat
attgcttccacctggcacgctctgggcagcaagtttcgcggcgaacagcgtccacagacc
cttaggtctctgtaccatttctttggcttggttccgctgctgcagacacccacactggag
tacgagaaagttgcggatgatgccctagagcagctgtggcaggccatcagtcgaccggga
acagatgcggcacaggttcgcaatgctctggcagccctaaagagctatgagccaggaagc
acgctcaaccttcggcacattccggctcagtttcgttttgagattgtcggtggagcagtg
ggaggacttagtggccgagaggtggtggatctgcaggaagagaccgtccccggcgaggtg
tgggtgcagctactacagaagattcgcccggaatgtggagatgcagcagctgatctgatt
tcccatcacataagcaacgaaataaacggctttcggagcggagtctaccgcctgcccgag
ggcaagccggagccacgcaagctagtgggtttgttcgggaccagcccgctccgtgcagta
accaactacatggtgagccaggcccgcttcggagactacgtgtcagagccctatgcagtg
acctttgccctcagggcgctgtccaataaatttcccaagccgataccaccgctcgattgg
agctgcttgacgagcttctttcacctatccttcgatgcgaggaagtactgcatcatgata
gccaagaatcaggcgtcgagctcaggcacagcgaagcgtttgctagagaacttcctggta
gaattcgagcctaattgcttcgaggaggatctgctgttactgttctcactgctaccggag
atcgccagcaacgtgggccttcagatcataaagaactttgccgagaaagtggctgtctat
tgcttcaaagagtcacagataaacgactttgtcgagggatgcctttttgaaaagtttttg
gacagcgtcaagtacattttcacgggaaagtgcgacctaccacccgaagtgttggatgtt
ttcacactgattgtagagcgctacatggactcgatgaatctggactcgaggctgtttgag
cgctacacagaggtggtggccgttttgcatccgaatgccatcgacgggctgaccacgccc
gccaattggtgggagacgcccataggcaagctaaaaaaggccaccatcatccgatgctat
ctggtgctgtataacgagaagttgcccaacccactcaaatggctgacgcccattattgat
gcctacgagaagcgcacggaggagcgctccttcttctatcgccacttggctgccactctg
tatgcctttggaagcgatgaacatgcctgtaactggatcatggaaatattcctggagatc
cagatgctgctggccgaggcctccaacaaggagaaggttaacagggcactttatctgctg
gacatctttgttctggccgtggatgtgctctccggctgtgccgtgctgctgggcagtgtc
gatgtggtggccacagacgataagcagcgactcaatctctttcccgagagcttgcagtat
ctgtgcgaccacatattctggaaggaccatgaagcaaaggtctatgaattcctatttaat
ctatataagcacagctccatgccgtcggactatgcagacgtattcaaggaggcaatcatt
tgttcccggaacaaaccatacttcgaccacaaaggtgtctggaccaaatacgtaggcctg
cgtaaatga
DBGET
integrated database retrieval system