Drosophila miranda: 108159727
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Entry
108159727 CDS
T06132
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dmn03009
]
108159727
Ribosome biogenesis [BR:
dmn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108159727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
108159727
NCBI-ProteinID:
XP_017148747
LinkDB
All DBs
Position
3:8097271..8105992
Genome browser
AA seq
2733 aa
AA seq
DB search
MAAITEKSKDTNTFRFKSFGDRVNEIDLRHLALYHIGHKNEELDEEENETYFQQTLQKWN
VLNLTEEYNYFSKRCRKIVTLPQLLHQKDVVVDLLLERLSTATNLSQQPLLELLYVLARD
LREQFYPYFQRILDRLICLLNTQDAEQLEWTLICLAHLFKTLKPYLKRNIGIVFNAILPL
LDEQHYAEHVINFAVECFAYIARDVRDFPRFLAYVLKTVLREQVESVHGCGRLIYEILRG
VNGQLHNSAAEIFAHVLDVLISQDGIHNSTAQAELLGDIVEYSLGLLLNFLRPDQSGVLW
QQLCSAASREGVDAAPLIDLMLPLVSHKDGRYVAELSLVVPTLLKLLERSVDSLQPLTTL
VTSLLKAQHTQLPQLDASRLLQKLLVVSRKSESLYEDSILQLLDYQQFEILVLPHVIGYY
EEARQTRALELLARIVQHKRPLQVDGTSLAQWEVYPLQLKHKETIKCVEQQLLTLDVAIE
EHLLLLVLVPHLRGFSKQPLEKTLHSNIEDRLRSASSDYTLLLLLLQTHALLKFKLPPAL
ATKLCAFLTPELVKDIRAVACLQLLLLETPKKELSASTELLTAVSTLLSQPQTQYRRIAA
HCLDLLNSGCKCNPYSHFYAASCVEPTVHNYRELLLELQQLEPASAKFEQYSQLPQFKEH
AVSLLLGLLYNNFKFVWAPVQQLLAAYVKVMGTDEFWNLFKAKLLETVACIDYEVNSTTP
LPQPHRATYASAALTMLLPEEAGEKQLSLQQALNYRQLLWQCLPKLGTLAEVKNADVVRL
FLQFVEQEYRAQLERTEHTWNVNEATAEDVDADDDEENEAPSGVRSRQKRRTHNVHAKFI
LQTLQLKLACFVSQPNPKALHRQAEMHAFYLELLAGPNTQLQQLALDCLAAYKQPAALVQ
QKAQLAGLIDEAKFKTTLSGFELASIPADQRSQLMPFMLRVLYGKMLTKGVQKQLSAQQR
KTLILRFLGQLEETEIIEFLKMAFGRFAEYTDKPIQELPRYVHSSYDSSAVIAAKQLQRI
VNLLELIRKEFAGRLTADFQVYVLKLLLLVGSVSQEVINGQGKLATAYKNVKHSGLQTLG
NYFGQLVDMEELWQEQEMNAICEVYVWPGLARLPQDSIHTPTPLLKLLLLWGGEPRYQKW
LNQSRSANEPAIMHQLMVLLLNDKAKPVVKRSLLQLVEQLLEAAATEEYGVEALAIIHPH
IPAILQQLQTSWRHRKAGRQMLDKRELNILTLITAHVQEPATCELLLELVLPIFTKQSAS
AGPETVVQLITTLSNLSQRVPRPQDYVRQLAPLFEQVHVLPARKLLCDLLADMAKRLHKE
AKQNPELSATAASLREWARIVLLLNAWDKRWLEQPDYDKRLEGLSELKQLVEHKDKRIDL
QLGVLVVYNCFYMLRHVSDLGIRVNIGELLKALLPLLTLQLEAKEEAQFWLEDTLLPLLQ
RSLKDEKHEHARSEAIGLLGELASHCPAAHEIFHDLSPLADKHDLEVDFFENMLHLQTQR
HGRALQRLVNISGGSWRHAPPCARTLTQFLLPLATRYLLSERHTGKHTLVDAAIEAVGVM
SELLPWTQYHAVLRYYLQKLRFAHAQQKQCVRLVVRILDAFHFDLTQAEADPATLVRLKQ
KLTEAAEEKKPQAQPEEVEGEEKPPKEELEEQDFIDFEGEEAAEPVEAVLAHQRTQLLAP
NAAKRVMSTITTVLLPTLNRSITEKTNYDAKHKVNRRRLSYEREEEEIQRVPIALAMVKL
LQKLPVELLENSLPGIFMKVCTFLRSPLKSVRMLTRDILKKIMITLGGSYVGMLLEQLQS
LLTRGFQVHVLSVTLHGVLDALRGELKPEHIESCLHNLLEVALNDIFGDVSAEKEVEKIV
AHTPEAKPSAKSYLTLHIAAKHIRDNCLLDLLLPFKEHLLRSHSRKVTQKIQECFAKIVA
GLVDNTHIARESLLIFIYGTMSESISDLLPGTQKRQLTAKEQALIKRARPDCLILQPAPG
RRSVAVGNKLVKSNAQANAHILVEFGLELLHFVLKRKKLSELDYQPFLHPMLPLLRDALS
SHHVRTTTYALKCYTAIWLGEYELSELDAEQLQPVVARMFEILKNFSSFGATRQEENAQL
VRGSFKAVVALLRKCQDYQLSVEQIEQLLLQIEQELQEGECSSQTMCFTLLRALVGRKVD
TRSLHDLMKRLGDLSIISQSDYVRDEARGILLTYIMEYPLQKRVDQLVKFMSVQLCYTQI
AGRQSAIQFMHSIINKFPLLLLAKQSEFLFLSLGTRLVNDEDPSCRRSVAAALEALIGRL
TKLERQPLLDLTLLFFTSPQSSQKPGVREMAAALLSRFVQAERAGFAERLPQVLPTLVNV
LTLGDAEASGRYVRAPGNLAAEVEEEQLEKKKRRKHSQSNPDEDLLLAGLDTETRLEHQQ
RSADHQIIQLQYCLLKIMEHCGDTMLADKEIADTVDQLAYGCQRLLGHEHNWVRCNAAKL
LTHLLAHYDYAYVGQQLVGVKREDGDEKPLDFIYAQPAQDIKSLVLDLCAQVTPGETAQE
MIDELSKIFLYVGHMLRDVPFSLKQEKETEEEAKERERPANKINLNWLVRNIRFLVNKEV
TKAPHDTSTRTAMFTLIEALSTLLSVEAVTRLAPALLQTLVREMSEEDQNVDAELRQLAL
RVGSRLRKRIGADIYDKLRNAVQTKLMVRRAERRKAVAQEKVHDPERAAKRKAGVQERKK
AAKRLKAAVIRGKAPDTKQKLKKRKRKAEMDGF
NT seq
8202 nt
NT seq
+upstream
nt +downstream
nt
atggcagccataacagagaagtcgaaagacacaaacacatttcggttcaagtcgttcgga
gatcgagtgaatgaaatcgacttgcggcacctggccctgtaccacatagggcacaagaac
gaggagctcgacgaggaggagaatgagacctatttccagcagacactccagaagtggaat
gtcctcaacctcacggaggagtacaactatttcagcaagcgctgcaggaagatcgtcact
ttgccgcagctgctgcatcaaaaggatgttgtggtcgatctgctgctggagcgactttcc
acagccacgaatctgtcgcagcagcctctgctggaactcctctatgttctggcgcgggac
ctgcgcgagcaattctatccgtacttccaacgcattctggaccgcctcatctgcttgctc
aacacccaggatgccgagcagctggagtggaccctgatttgcctggcccatctattcaag
actctgaagccctatttgaagcgcaacattggcattgtgttcaacgcgattctgccacta
ctagacgagcagcactacgccgagcacgtaatcaactttgccgtggaatgcttcgcgtac
atagcccgagacgttcgcgacttcccccgctttctggcctacgtgctgaagacagtgttg
cgggagcaggtcgaaagtgtccatggctgtggcaggctgatctacgagatacttcggggc
gtcaatggacaactgcacaactcggctgccgaaatctttgcccatgtcctggatgtgctc
atcagccaggacggcatccataactcaacggctcaggcggaacttttgggcgacattgtg
gagtattcattgggactgctattgaacttcctacgccccgaccagagtggcgttctatgg
caacagctctgctccgcagcgagccgtgagggcgtcgacgctgcgccactgattgacttg
atgctgcccctggtcagtcataaggacggacgctacgtggccgagctgtccctcgtggtt
cccaccctactgaagctgcttgagcggagcgtagattccctgcaaccgcttacgaccctg
gttaccagcctgctcaaggcccagcacacgcaattgccgcagctggatgccagtcggttg
ctgcagaaattgctggtcgtaagcagaaaatccgagtcgctgtacgaggactccattctg
cagctcctggactatcagcaatttgagattttggtcctgccgcacgtcatcggctactac
gaggaggcgagacagacaagagccttggagttgctggcccgcatagtccagcacaagagg
ccgctgcaggtggacggcacatccctggcccaatgggaggtctatcccctccaactgaag
cacaaggagactatcaaatgcgtggagcagcagctcctgaccttggatgtggcaatagag
gagcacctgcttctgctggtgctggttccccatctgaggggcttcagcaagcagcccctg
gaaaaaacacttcactctaacattgaagatcgcttgaggagcgccagctcggattacacc
cttctgctactgctactgcagacccatgccctgctcaagttcaagcttccccctgctctt
gccaccaaactgtgtgcctttctaacgccggaactggtcaaggacatccgcgccgtggcc
tgcctgcagctgcttctgctggaaacccctaagaaggagctctcggcctccacagagctg
ctgactgctgtctccactctgctcagccagccccagacgcaatacagacgcatagcggcc
cactgcctggatctgctaaactccggctgcaaatgcaatccctactcgcacttctacgcc
gcctcctgcgtagagcccaccgtgcacaactaccgcgagctgctcctcgagctgcagcaa
ctggagccggcgtccgccaagttcgagcagtactcccagctgcctcagttcaaggagcat
gcggtgagcctgctcctcggcctactctacaataactttaagtttgtgtgggccccggtc
cagcagctcctggccgcctacgtgaaggtaatgggaacggacgagttctggaacctgttc
aaggcgaagctgctcgagacggtcgcctgcatagactacgaggtgaactcgacgacccca
ctaccacagccccaccgggcaacctatgcgtcggctgccctgaccatgctcctgcccgag
gaggctggagagaagcaactgagtctgcagcaggcgctcaattatcgccaactgctgtgg
cagtgcctgcccaagctgggaactctggcggaggtgaagaatgcagacgtggtgcgactg
ttcttgcagttcgtcgagcaggagtaccgagcccagctggaaaggacagagcatacgtgg
aacgtcaacgaggccacagcggaggacgttgacgccgacgatgatgaggagaacgaagcg
ccgagcggcgtccgatcccgccagaagcggagaacgcacaatgtccatgccaaattcata
ctccaaactctgcagctcaagctggcctgcttcgtgtcgcaaccgaaccccaaggccctg
caccgacaggcggagatgcatgccttctacctggagctcctcgcagggcccaacacccag
ctgcagcagctggcccttgactgcctggccgcctacaagcagccagcggctctggtgcag
caaaaggctcagctggcgggtctgatcgatgaggcaaagttcaagacaacgttgagtggc
ttcgagttggccagcatcccagcggatcagaggtcccagctgatgcccttcatgctgcgc
gtgctctacggcaagatgctaacgaagggtgttcaaaagcagctgagtgcccagcagcgg
aagaccctgatcctgaggttcttgggacagctcgaggagacggagatcatcgaatttcta
aaaatggcattcggacgcttcgccgaatacacagacaaacccatacaggagctgccccgc
tatgtccacagctcgtacgattcctcggcagtgattgcggccaagcagctgcagaggatc
gtcaatctcctggagctcatacgcaaggaattcgctggccgactgacggcagacttccag
gtctatgttctcaagttgttgctgctcgtcggcagtgtctcccaggaggtgatcaacggc
caaggaaagctggcgaccgcctacaagaatgtgaagcactcgggactgcagaccctgggg
aattactttggccaattggtggacatggaggaattgtggcaggagcaggagatgaacgcc
atctgcgaggtgtacgtctggccagggctcgcccgactgccacaggactccatacacacg
cccacgccgctgcttaagctgctgctcctctggggcggtgagcctcgctatcagaagtgg
ctgaaccagagtcgctccgcgaatgagcctgccatcatgcatcagctgatggtattgctg
ctcaacgacaaggccaagcccgtggtgaagcgttcgctgctgcagcttgtggagcagctc
ctggaggcggctgccaccgaagagtatggtgtcgaggccctggccattattcatccccac
atcccggccatcctgcagcagctgcagactagctggcgacaccgtaaggccggcagacag
atgctggacaagcgggagctcaatattctgacgctgattaccgcgcacgtgcaggagccg
gccacctgcgaactgctgctggaactcgtcctgccaatattcacgaagcagtcggcttcc
gctggtcccgagaccgtcgtccagctgatcaccacgctctccaatctcagccagcgtgta
ccccggcctcaggactatgtgcgccaactggcgccgctttttgagcaggtgcacgtcctg
cccgccaggaagctgctctgtgaccttctggcggacatggcaaagcggctacacaaggaa
gccaagcagaacccagagctctccgccacggcggcgtctcttcgggagtgggcgaggatt
gtgctgctgctgaatgcgtgggacaagcgctggctggagcagcccgactacgataagcgg
ctggaggggctgtcggagctgaagcagctggtggagcataaggacaaaaggatcgacctg
cagctgggagttctggttgtctacaactgcttctacatgctgcgccacgtctcggatctg
ggcattagggtcaacattggcgagctgctgaaggccctgctcccgctgctgactctccag
ctggaggcgaaggaggaggcacagttttggctggaggacacattgctgccactgctgcag
cgctctctgaaggacgagaagcacgagcatgcgcgaagcgaagccatcggcttgctgggc
gaactcgccagccattgtcccgcagcacacgagatcttccacgatctgtctcctctggcg
gataagcacgacctggaggtggacttcttcgagaacatgctgcatttgcagacccagcga
catggtcgagccctgcagcgactcgtcaacatctccggcggcagctggcggcacgcgccg
ccttgtgcccgcacgctaacgcagttcctcctgccgctggccacacgataccttctcagc
gagcggcacacgggcaagcacactctggtggacgccgccatcgaggcggtgggcgtgatg
agcgaactgctgccctggacgcagtatcatgccgtgcttcgctactacctgcagaagctt
cgattcgcccacgcccagcagaagcagtgcgtccgtttggtggtccgtattctggatgcc
ttccacttcgatttgacgcaggcagaggctgacccggccacgctcgtgcgactcaagcag
aagctgactgaagccgcggaggagaagaagccccaagcacagccggaggaagtggaggga
gaagagaagccaccaaaagaggaactcgaagagcaggacttcattgatttcgagggagag
gaggcggccgaaccagtggaggcagtgttggctcatcagcgtacccaactcttggccccc
aatgctgccaagcgcgtcatgtcaaccatcaccaccgtgctcctgcccaccctcaaccgg
tccatcactgagaagaccaactacgacgccaagcacaaggtgaaccgccggcggctgagc
tacgagcgcgaggaggaggagattcagcgcgtgcccattgccttggccatggtgaagctg
ctccagaagctgcccgtcgagctgctggaaaacagcctcccaggaatctttatgaaggtc
tgcaccttcctacgctcccccctgaaatccgtgaggatgctgacccgcgacattctcaag
aagattatgatcactctgggcggcagctacgtgggcatgctactggagcaactgcagtcg
ctgctcacgcgcggcttccaggtgcacgtcctgtccgtaacgctgcacggagttctggac
gcactccgaggcgagctgaagccggagcacattgagagctgcctgcataacctgctcgag
gtggccctgaacgacatattcggagatgtgagcgccgaaaaagaggtcgagaagattgtg
gcccacacgcctgaggccaagcccagcgccaagagctacttgacccttcacatcgccgcc
aagcacatccgcgacaactgtttgctggacctgctgctgcctttcaaggagcatctgctc
aggtcgcactcccgcaaggttacccagaagatacaagagtgctttgccaagattgtggcc
ggcctggtggacaacacgcacatcgcccgggagagtctgttgatcttcatctacggcacc
atgtcggagagcatcagcgacctgctgccgggcacccagaagcgccagctgaccgccaag
gagcaggctctgatcaaacgcgctcgtcccgactgcctcatcctccaaccggcgccaggg
cgacgcagtgtggccgttggcaacaagctggtcaagtcgaatgcccaggccaatgcccac
atactggtggagttcggactggagctgctgcacttcgtgctgaagcgaaagaagctgtca
gagctcgactaccagccctttctgcaccccatgctgcccctgctgcgcgacgcgctgagc
agccaccacgtcaggaccaccacctacgccttgaagtgttacacggccatttggcttggg
gagtacgagctgtccgagctcgacgccgaacaactgcagccagtggtggcacgaatgttt
gagatcctgaagaatttctccagctttggggccacgcggcaggaggagaacgcccagcta
gtccgcggcagcttcaaggcagtcgtggcgctgctccgcaaatgccaggactaccagcta
agcgttgagcaaatcgagcagctgctgcttcagatagaacaggagctgcaggagggcgag
tgcagcagccagaccatgtgcttcactctgctcagggctctggtgggccgcaaggtggac
actcgctcgctgcacgatctgatgaagcgtctcggcgatctgtccatcatatcgcagtcg
gactacgtgcgggacgaggcccgcggcatcctgctcacctacatcatggagtacccgctg
cagaagcgtgtggatcagctggtcaagttcatgtccgtccagttgtgctacacccagatc
gctggccgacagtcggccatccagttcatgcactccatcatcaacaagtttcccctcctg
ctgctcgccaagcaatccgagtttctgttcctctcgctgggcacgcgattggtcaacgat
gaggatccctcgtgtcgtcgcagtgtggccgctgctctggaggcgctgattgggcgccta
accaagctggagcgccagcctctgctggatctcactttgctgttcttcacgtcgccgcag
tccagccagaagccgggtgtcagggaaatggcggccgcgctcctctccaggtttgtccag
gcagagcgggctggattcgcggagagactgccgcaggtgctgcccacgttggtgaatgtt
ctgacgctgggcgatgcggaagcgtccggcagatatgtgcgtgctccggggaatctggca
gcggaggtggaagaggaacaattggaaaagaaaaagaggcggaagcattctcaatctaac
cccgatgaggacctgcttctggccggcctagacactgagacgcgactggagcaccagcag
cgcagcgcagaccatcagatcatccagttgcagtattgcctgctgaagatcatggagcat
tgcggcgacacgatgttggccgacaaggagattgccgacaccgtagatcaactggcctac
ggctgccagcggctcttggggcacgaacacaactgggtgcgctgcaatgcggccaagctg
ctgacacacctcttggcgcactacgactacgcctacgtgggccaacagctggtgggcgtc
aagcgagaggatggcgacgagaagccgctggactttatttacgctcaacctgcccaggat
atcaagtccttggtactggacctgtgtgcccaggtcacgcctggcgagacggcacaggaa
atgattgacgaactgtccaagatctttctgtacgtggggcacatgctaagggatgtcccc
ttcagtctcaagcaggagaaggaaacggaagaggaggcgaaggagcgagagcggccggct
aacaaaatcaacctcaattggctggtgcggaacatacgctttttggtgaacaaggaagtg
acgaaggccccacacgacaccagcacacgcactgccatgttcacgctcattgaggccctc
agcacgttgctcagtgtggaggcggttacccgactggctcccgcccttcttcaaacattg
gtgcgtgaaatgtcagaggaggatcagaacgtcgatgcggaacttcgtcagctagccctg
cgtgttggcagtcggctgaggaagcgaataggagcggatatctacgacaaacttcgcaat
gcggtgcaaaccaagctgatggtgcgacgggctgaacgccgcaaggccgttgcccaggag
aaagtccatgatccagagcgagcggccaagcgtaaggcgggagtgcaggagcgcaagaag
gctgcgaagcgtctgaaggcagcggtgattcgtggcaaggcgccagacaccaagcagaag
ctgaaaaagcgcaaaaggaaagctgaaatggacggattttaa
DBGET
integrated database retrieval system
