Drosophila miranda: 108159784
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Entry
108159784 CDS
T06132
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X5
KO
K14296
nuclear pore complex protein Nup153
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
dmn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108159784
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108159784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108159784
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108159784
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Serglycin
Motif
Other DBs
NCBI-GeneID:
108159784
NCBI-ProteinID:
XP_017149204
LinkDB
All DBs
Position
XL
Genome browser
AA seq
1788 aa
AA seq
DB search
MSEFEDSPQQNSQTKKPLQRHQAMTFSTRSGSNTHPLTPLQEVREPEEGAEDDSAAGSPL
VSRKSLMGRMKLRVSNILPSSWFSPTSKATTPEAQEEQQQQQNGTGTTSLTKRKRGRRRI
ELAEPDGEDSPAGGLLPDVDDGAAARGLDYEEVALADNIAEHDLVGEDEQTRRSEYNVFA
LRKRRTAIAADDDFDEDDEEVPDGDEEEDEDDGDDDHVQASASPQPKRRRLELETSVHLP
CMRRLPLPLVSSTPAAAAAASAGQLYTSGNSQALGTRSHSRGSNPGGVAPHRRTHLNLYY
QHQQREPGYNFFAGNESAAEATTGDLPVSIRRSLNIPAIEHPRGRSFSFGQTSSSFSAVP
LAYHKRPPLLGQTDTVPEASLDVAQSDNERIEQLLNICKSNNNISSSNNNNNNIIKSKRG
AATATAAAAAGAEAGAGADLESELNEYAEAVEASDSYPDHHNSNNNSDQWFYGNLQSAKS
IFTRGSAQPTHHNSTCSLNSLNKRRRFNAYIYGSSSALSDSRLLTRSASASAWGSGSTLS
SPFYKGQTTFGGNSAHNRIFGQSGGSSSSVAINSGGRSPAANQAPPHTGYRIKKIAMGPR
KQTETPNTSVVDSMSLSTSTRRILSLLETYSSPLFDVKRLGNTLKEQQQQQQLQKLQTSI
SYSPPMQQVLERRRLHRVTQSSKDLLLNYKTKASSATTMALAALPALPDRHTNNNSHTNK
MRSRLSHTSSRKPREDIEMAPEPLDLPMIIFPAMANTPTFDLVIKPPPPPRVPSVTANTT
TDLQMIPRTQTAVPRPAVNFVGANANSAATETARAPANARGSGSVSVSSAALQPSNVSGR
RFSFVEPIPVPILGEGETAQESRNTRHFSFPAPASLEMQQQQQQSLPFMNGPSTTAASAH
NPSSSQLSVVGGFSQQFMKSATEWECDVCMIRNKSELVRCAACETPKPSKTAAPPTSAVP
LSAASGFGDRFKKSSSAWECDTCMISNKNEDSKCVACETPRQGATTAASKTTTDCFSITN
SPGCGSGSGSGSGSGSGFSTSSSSSGFGQAFRPKANTWECQTCLVMNQTSAVECVACQSR
NPNASSESSSSSSTSNPPTNVSSSTSNSNTTSFKFGFTPEQQQQQQAVKPGASFKQLVAA
QKAVSWECETCMAMNDLSLSKCCCCEQLRPRSDDCKPSSNATHPVPTFTFGFVAKAKEAA
PVQPALPAPTSNAAPQFSFGFGQSKDVADSNNASTGGFKFGALPTQEEPKSIDLRAIPTG
TKATSTTGIETAATGAAGAAATATPVSQFSFRAPTTTSTQLSSSSDTATATAAATTSATA
TAAATATATAAATTVKSQVFSFGTPSLPSSSSAVSSSTHTSGSNASATLAISSSNTKPMF
IFSAAPSATTSSVSSSTSQQPTVTTAPVVFFGAGTTTNPGGPAATSSTSFAAAPAPASVS
AAAAPEPAPGLFSFGGPSSASSTKKAAPSSNSNTFFFGQTPTSTAAPTTNATGSIFGAAV
TSAAQPLSFGEKRAASGIPVNTLTKPVSFGWPSASASPSPNPIPSNGSTAQVPATATDST
SLPTVVSGGSVFGSGFGAGFGSTSAASTTTTPAPTSAFGGNGALPTTGFGFVGNSMAPQS
LPAPASGPAAMFSNAITPAFGGSNGGGGGGFGGGSNAAAAKPSFNFGGSSALSQSAATSG
PYNFGGTTGSAIPTKPAFNFTGSATVSAGTATPQATPAFNFSAGSATANSLASGDSTPNA
NAPFQFRAGAPAPANMFAFNPPPAGNAAQNSQMARRKIRAPVRRLPPR
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtttgaggatagtccacagcaaaatagccaaacaaaaaaaccactgcaacga
caccaagccatgacattcagcacgagatcgggatcgaacacacatccgctaacgccgctc
caggaagtacgcgagcccgaggagggggccgaagatgattctgctgccggctcacccctc
gtctcccgcaaatctctcatgggacggatgaagctgcgcgtttcaaatatcctgccatct
tcatggttctcaccaacttctaaggccaccaccccggaggcccaagaggagcagcaacaa
caacagaatggaacaggaacaacgtctctaacgaaaaggaaacgaggacgccgtcgcata
gagctggccgaacctgacggcgaggattcacccgctgggggcctgctacccgatgtggat
gatggcgccgctgcacgaggtctggactacgaggaggtggccctggccgacaacatagcc
gagcatgatttggttggcgaggatgagcagacacgccgcagcgaatacaatgtgttcgcc
ttgcgcaaacggcgcactgcgattgccgccgatgatgattttgatgaagatgacgaagag
gtgccagatggtgacgaagaggaagacgaggacgatggtgacgatgatcacgtacaagcg
tcagcctctccccagcctaagcgtcgacggttggaactggagacaagcgtccatttacca
tgcatgcggcgactgccattgccactggtttcctccacgcccgctgctgccgctgccgct
tccgccggccaactatacacctcaggcaattctcaggcattgggcacccgcagccatagt
cgtggctcgaacccgggtggcgtggctccgcatcgccgcacccacttgaacctctattac
cagcatcagcagcgtgagccgggctacaacttctttgcgggcaacgagtcggccgccgag
gccaccacaggagatctgccagtcagtatacgtcgatcgctgaacatcccagccatagag
catccacgcggtcgtagcttcagcttcgggcaaaccagcagcagtttctccgccgtgcca
ttggcctaccacaagagaccccctctgctggggcagactgacacggtccccgaagcatcc
ctcgatgtggcacagtcagataatgagaggattgagcaactactgaatatctgcaaatcc
aataataatatcagcagcagcaacaacaacaacaacaacattatcaaatcgaagagaggc
gccgccacagccacagcagcagcagcagctggagcggaagcgggagcgggagcagatttg
gagagcgaactgaatgaatatgccgaggcagtggaggcctccgattcctatcccgaccat
cacaacagcaacaacaacagcgaccaatggttctatgggaatttgcagagcgcaaagtca
atattcacacgcggctcggcccaaccgacgcaccacaattctacgtgttcgctgaattcg
ctgaacaagcggcggcgcttcaatgcctacatctatggcagctcctcggccctgagcgac
agccggctgttgacacgcagtgcttccgcctcggcctggggctccggctcaacattaagc
tcgcccttctacaagggccagaccacattcggcggcaattcggcgcacaatcgcatcttt
ggccagagtggcggctcctcgtcatcggtggccataaactcgggcggccgttcaccggcc
gccaatcaggcgccaccccataccggataccgcataaagaaaattgctatgggccccaga
aagcaaacagagacaccaaacacatcggtcgtggacagcatgtccctctcgacctccaca
cgtcgcatcctgagcctactggagacgtactcctcgcctctgtttgatgtcaagcggctc
ggaaacacactgaaggagcagcagcagcaacaacagctgcaaaagctgcaaactagcatt
tcctattccccgccaatgcaacaggtactcgaacgacgtcgcctgcaccgtgtcacccag
agctcgaaggatttgcttttgaattacaagacaaaggcatcatcggccaccaccatggcc
ctggcagctctgccagctctgccagaccgtcacaccaataataatagtcacacgaacaag
atgcgctcccgactgagtcacacgtcgtcgcgcaagccgcgcgaagatatcgaaatggct
cccgaacccctcgacttgccgatgatcattttcccggccatggcaaatacaccgacattt
gatttggtcatcaagccaccgccgccgccgagggtgccatcggtgacggccaacacgaca
acggatctccagatgattcccagaacccaaactgcagtccccaggcctgcggttaatttt
gtgggtgccaatgctaattctgcagcaacagaaacagcaagagctccagctaatgccagg
ggcagtggcagtgtcagtgtcagttctgcagccttgcagcctagcaacgtatcaggacgt
agattcagctttgttgaacccataccagtacccatactgggagaaggagaaactgcacag
gaatcgaggaacacgcgccatttctcctttccagcaccagcttcattggagatgcagcaa
caacagcagcagtcgctgccatttatgaacggtccatccaccaccgctgcatccgcacat
aatccaagcagcagccagctgagtgtggtaggaggctttagccagcagtttatgaaatca
gccactgaatgggagtgcgatgtgtgcatgatcagaaataagtcggagctggttaggtgc
gcagcctgcgagacgccaaagccttccaagactgccgctccacctacatctgcagtacca
ttgtcggctgccagcgggttcggagatcgtttcaagaagtcttcgagtgcctgggagtgc
gacacatgcatgatatccaacaagaatgaggatagcaagtgcgtggcctgcgagacgccg
cgccagggagctaccacagcagccagcaaaaccaccaccgactgtttctcaattacaaac
agcccggggtgcggttccggctctggctctggctccggatcgggatcgggtttctccaca
tccagttcgagttccggctttgggcaggctttcaggcccaaggccaacacatgggagtgc
cagacatgcctggtgatgaatcagacgagtgccgtcgagtgcgtcgcctgccagtcgcgc
aatcccaatgccagcagcgagtccagctcgagctcctccacaagcaatcctccaaccaac
gtctcttcgagcaccagcaacagcaacactaccagcttcaagtttggcttcaccccagag
cagcagcagcagcagcaggcagtcaaaccgggtgccagtttcaagcagctggtggctgcc
cagaaggcagtcagttgggagtgcgagacgtgcatggccatgaacgacctttcgctctca
aagtgctgctgctgcgagcaactgaggccgagaagcgacgactgcaaaccctcatccaac
gccactcacccggtgcccacgttcacgttcgggtttgtggcaaaagcaaaggaagcagca
ccagtccagccagccctgccggctccaacatcgaacgctgctcctcagttctcctttggc
tttggccagagcaaggatgtggcagacagcaacaacgcttcgacaggaggattcaagttc
ggagccctccccacccaggaggagccaaagtcaatcgatctacgggcaattccgactggc
acaaaggccacatccaccacaggaatcgaaacagcagcaacaggagctgccggagcagca
gcaacagcgacccccgttagccaattttcattcagagcccccaccaccacatcgacacag
ctgtcctccagcagcgacacggctaccgctaccgccgcagctaccacaagcgcaaccgca
accgccgcagctaccgcaaccgcaaccgccgcagctaccactgtcaagagtcaagtgttc
agctttggaaccccgtcattaccttcttcatcatcggcagtgtccagttcgacgcacact
tcgggcagcaacgcgagcgccacccttgcgatcagctcctccaatacgaagcccatgttt
atcttcagcgctgccccctccgcaacgaccagcagtgtaagcagcagcactagccaacag
ccgacggtgacgacagcacctgtggtcttctttggggctgggaccacaaccaatccagga
ggaccagccgcaacatctagcacatcgtttgctgcagcaccggctccagcatcggtctct
gccgctgcagcgccagagccagcgccgggtttgttcagctttggcggtccatcttcagct
agctccacgaaaaaagctgcccccagcagcaacagcaacaccttcttctttggccaaact
ccgacatcgacggcagccccgactacaaatgcgacgggctccatctttggagcagcagta
acatcagcagcacagccgctaagctttggagagaagagagcggcatcgggtatacccgta
aacaccctgacaaagcccgtaagctttggctggcccagcgccagcgctagccctagcccc
aaccccatacccagtaatggcagcacagcccaggtcccggccaccgccaccgacagcacc
agcctcccgacggtggtgtctggcggctctgttttcggcagtggatttggagccggcttc
ggcagtacatcggccgccagcacgacaacaactccggcaccgacttcagcttttggcggc
aatggagccctccccaccacgggtttcggctttgtgggtaactcgatggccccccaatct
ttgcctgcgcctgcgtccggtccggctgctatgttcagtaatgccatcacgcctgccttt
ggcggcagcaatggagggggaggaggaggctttggcggcggaagcaatgccgcagctgca
aagccatcatttaactttggaggctcttcggctctttcccagtcggcggccacatctgga
ccctacaactttggcggcaccacgggcagtgcgatccccactaagccggcctttaatttt
acgggctcggctacagtgtccgctggcacagcaacaccacaggcgacgcctgcctttaac
ttttccgccggttcggcgactgccaattccctagcatcgggcgattcaacgccaaatgcc
aacgcaccgttccaatttagagccggtgctccggcgccagccaatatgttcgccttcaat
ccacctccagctggcaacgccgcccagaattcacagatggcgcgccgcaagatccgcgcc
cccgtgcgccgtttgccgccacggtag
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integrated database retrieval system
