Drosophila miranda: 108160092
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Entry
108160092 CDS
T06132
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
dmn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108160092
03015 mRNA surveillance pathway
108160092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108160092
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108160092
mRNA cycle factors
P-body specific factors
108160092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
108160092
NCBI-ProteinID:
XP_017149358
LinkDB
All DBs
Position
3:complement(6080293..6082058)
Genome browser
AA seq
514 aa
AA seq
DB search
MSEIKDEKQKASNPESKPERSRGNRRKDRKEKSNPTVKIVMRHLPPTMTEKEFLDQVGPL
PSESDSYYYCQADWSLGHDATCRAYIDMTPKDNTELLQFRDRFDGYVFVDQYGVEYHAMV
EYAPFQCFLKNKSRTDDKVNTIEAEAHYQAFLQKLADEREEASRIGEVKIDLTFDRKSDD
RVRSTPLLQYLANKKEKRREEARKRNEEKKKHREEQKQVKLMEQSESSKPKESTADVKKD
TGTKPKAGAKDVQSQNQTTEGAKNSRSKRRTERDQRRREEHEQRKLDRERDQKDIKNPER
QDNPDKEKPFSNKNGKKSKQQKDLNKPERDIAILKKESKFDLKKCEELPLASKKTNVGDC
SEAAQSKSKEETSVPDTIKKTVQAVSDQSETDNSAVTTVQPAGPSRSKSFDDTRKSSFRS
SEERRIRNKDRPSIAIYQPKARVRKGSGDQSQNGNKDASKSRDEPISDGEVSLAEEKPAR
KNKRPGRRNKSKPCQGISKSSENSCSANEPAIVK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaattaaagatgaaaagcaaaaggctagtaatcctgaaagtaagccagagaga
tcgcgaggaaacaggagaaaagacaggaaggaaaaaagtaatccgaccgtcaagatagtg
atgcggcatttgccgccgacaatgacggagaaggaattcttggatcaagtggggccgttg
ccgtcggaaagcgactcgtactattactgccaagcagattggtccctgggtcatgacgcg
acatgccgggcatacatcgatatgaccccaaaggataacaccgagcttctgcaatttcga
gatcgatttgatggatacgttttcgttgatcaatatggcgttgaataccatgccatggtg
gagtatgctcctttccagtgcttccttaagaacaagtcccgaactgatgacaaggtaaac
acgattgaggccgaggcgcactaccaggcttttcttcagaagctggctgatgaaagagaa
gaggcaagccgcataggtgaagttaagatcgacctgacgttcgaccgaaaatctgacgac
agggtgcggtccacccctctgcttcaatacctagctaacaaaaaggaaaagcggcgggaa
gaagcccgaaaacggaatgaagagaaaaagaaacaccgcgaggagcaaaagcaagtcaaa
ttaatggaacagtcggaaagcagtaagccgaaagaatccactgctgacgttaaaaaggat
actggcaccaagcccaaagccggcgctaaagatgttcaatcccaaaatcagacaactgaa
ggagcaaagaactcacggtcaaaacgtcggacggagcgcgaccaacgtcgacgtgaagag
catgagcagcgaaagctggaccgcgaacgtgaccagaaagatataaaaaatcctgaacgc
caagataaccccgataaggaaaagcctttcagcaataaaaatggtaaaaaatctaaacag
cagaaagatctgaataagccagaaagagatattgctattttaaaaaaagaaagcaaattt
gatttgaaaaaatgtgaagaacttccattggcgtccaagaaaacgaatgtaggtgattgc
tcggaagcagcgcagtcaaaatcgaaggaagaaaccagtgttccagataccataaagaaa
actgttcaagctgtcagcgatcaatcggaaaccgacaattcggcagttactacggttcag
ccagcaggtccatctaggtcaaaaagtttcgatgatacgcggaagtcaagctttcgatca
tccgaggagcgtcgcattcgaaataaggatcgtccttctattgcaatatatcagccaaag
gctcgcgttcgtaagggatcgggagatcagtctcaaaacggtaacaaagacgcttccaaa
tcgcgcgacgagccaatttcggatggagaggtttctttagctgaggagaagccggcaagg
aaaaacaagaggccaggtcgtcgcaataagtcgaagccctgccagggtatctccaagtct
tcagaaaatagctgcagtgcaaacgaaccggctatcgtgaaataa
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