Drosophila miranda: 108160486
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Entry
108160486 CDS
T06132
Name
(RefSeq) mRNA export factor
KO
K14298
mRNA export factor
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108160486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108160486
03036 Chromosome and associated proteins [BR:
dmn03036
]
108160486
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108160486
Chromosome and associated proteins [BR:
dmn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108160486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_HPS5
WD40_RFWD3
DUF7165
Motif
Other DBs
NCBI-GeneID:
108160486
NCBI-ProteinID:
XP_017149997
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Position
3:complement(12955545..12956820)
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AA seq
347 aa
AA seq
DB search
MFGATQSSNRMNDFEVASPPDDSVSALEFSPSTLPSKNFLIAGSWDSSVRCWEVEQNGAT
VPKSIKSMGGPVLDVCWSDDGTKVFMASCDKQVKLWDLGSDQVMQVAAHDGPVKTCHMVK
GPNYTCLMTGSWDKTLKFWDTRSPNPMMAINLPERCYCADVEYPMAVVGTASRGLIIYSL
QNTPSEYKRQESPLKYQHRTISIFRDKKKEPTGYALGSIEGRVAIQYVNPANPKDNFTFK
CHRSTSSSGFQDIYAVNDIAFHPVHGTLVTVGSDGTFSFWDKDARTKLKSSDAMDQSITK
CGFNSNGQIFAYAVGYDWSKGHEYFNPGKKPQIFLRSCYEELKPRIN
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggccacacaatcatcgaatcgcatgaacgatttcgaggtggcatcgccgccc
gacgactctgtttcggcattggagttcagcccaagcacattgccttccaaaaacttcctg
attgccggcagctgggacagcagcgtacgttgttgggaggtggaacagaatggagcaaca
gtgccaaaatcgatcaaatcaatgggcggaccagtgctcgatgtgtgctggtctgacgat
ggtacgaaagtgtttatggcgtcctgcgataagcaagtaaagctctgggacttgggatcg
gatcaagtaatgcaagtggcggctcacgatgggccagtaaaaacatgtcacatggtaaag
gggccgaactacacgtgtctgatgaccggatcctgggataaaacattgaagttttgggat
acccgatcgcccaacccaatgatggcaattaacttacctgaacgctgctattgtgcggat
gtggagtatcccatggccgttgtgggcactgcatcgcggggcctaatcatatactcgctg
cagaacactcctagcgagtacaagcggcaggagagtccattgaaatatcagcatcgcacc
atatcgatttttagggataagaaaaaagagcccactggatacgctttgggcagtattgag
ggtcgcgtggccatccaatacgtgaatccggctaatcccaaagataacttcacgttcaag
tgtcatcgctccacaagcagctctggcttccaggacatttacgccgtaaacgacatagca
ttccatccggtgcatggcactctggtcacagtcggctctgatggcacattcagcttctgg
gataaggacgcccgtactaagctcaagtctagcgatgccatggatcagtctataaccaag
tgcggattcaattcgaatggccaaatattcgcttacgcggttggatacgattggtcaaag
ggccatgagtacttcaatccaggaaagaagccacaaattttcttgcgctcgtgctacgag
gaattaaagccaaggatcaattga
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