Drosophila miranda: 108161183
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Entry
108161183 CDS
T06132
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
dmn
Drosophila miranda
Pathway
dmn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108161183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmn03021
]
108161183
03036 Chromosome and associated proteins [BR:
dmn03036
]
108161183
Transcription machinery [BR:
dmn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108161183
Coactivators
SAGA/TFTC/STAGA complex
108161183
Chromosome and associated proteins [BR:
dmn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108161183
STAGA complex
108161183
TFTC complex
108161183
SAGA complex
108161183
SLIK complex
108161183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_SCAP
TFIID_NTD2
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_WDR11_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
108161183
NCBI-ProteinID:
XP_033249150
LinkDB
All DBs
Position
4:complement(15467242..15469702)
Genome browser
AA seq
555 aa
AA seq
DB search
MGNPHNKKSNKKKCKEPGKKNKPTQKRTQEKEHVSGAEVQKGDVVRKQKFYEDFVDFYEG
AGLGPIQQRIFCTTVLADYEQTFKTIGKITKEMVDFRKYEVYVMLYPTLAIAYLQMVWSG
KLQRAISFVGRNKHELDDSYKRRIEKLKLIRKPLDVPQRALELLSGADKVKFCMLTSTFN
QFKELECQLSPSGHLKRFLDHFEILTYADDKIPQEQTLRDRPLPAPFAWASRDVIPDCPF
NRKNLPSIIMNNAIPSPNDNVTCATYSADHCTVAFGTSSGRVHVVAVNKDWQDVNSLQRE
TLISAHQKPVLACAFSPGDSHLLTSSADRTMRLWCTRTALCKTVYVHHGALCLAFAPRGC
HFATASNDNVARVWGVDSTEPLFEFLGHLARLEICLFHPNGEYLATGSADATVRIWDYDT
RAQMRLFRGHRAPIKALAYSVCGRFLVSGGRDDLIIVWDTTNERMLHCMIWHNAMIESIG
FSHCNNLMVVWGKDCHLSTFDFQLLVRSPEMELSSTKAIIDQSLISTVQSPRNRIFLKSG
FVDRNRLVAICKINS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacccccacaataagaagtcgaacaaaaaaaaatgcaaggaacccgggaaaaag
aataagccgacacagaagcggacacaggaaaaagagcacgtgtcgggtgcagaggtgcag
aaaggtgacgtcgtgcgtaagcagaaattctacgaagatttcgtcgatttttatgagggc
gctggactcgggccgatccagcaaaggatcttctgcaccacagtactcgcggactatgag
cagacgttcaagacgatcgggaagatcaccaaggaaatggttgactttcgtaagtatgaa
gtatacgtgatgctctatcccactctggccattgcttacctgcaaatggtgtggagcgga
aagttgcagcgggctatatccttcgtgggcaggaacaaacacgagctggacgactcgtac
aagaggcgcatcgagaagctcaagctgatccgcaagccactggacgtgccacaaagagcc
ctggaactgctatctggtgcggacaaagtgaagttctgcatgctcacgagcaccttcaac
caattcaaggaactcgaatgtcagctttcgccgagtggtcacctgaagcggtttttggac
cacttcgaaatcctaacttacgctgatgacaagataccccaggagcagaccctccgagat
cgtcctttgcccgcgccatttgcctgggcttccagggacgttattccggactgtccgttc
aaccggaaaaatctgcccagcatcatcatgaacaatgccattccctcgcccaacgacaac
gttacttgcgcgacgtattcagcagaccattgcaccgttgcatttggcactagctccggc
agggtccacgtcgtggccgtgaacaaggactggcaagacgtgaacagcctgcaaagggag
acgttgatttccgcccaccagaagccggtcctggcctgcgccttttctcctggagacagc
cacctgctcacctcctcggctgaccgcaccatgcggctgtggtgcacacgcaccgcgctg
tgcaagactgtctatgttcaccacggggccctctgtttggcgttcgccccgaggggctgc
cactttgccaccgcctcaaacgacaatgtggcgcgcgtgtggggagtggactccacagag
cccctttttgaattcttgggccacttggcacgattggagatttgcctcttccacccgaat
ggagagtacctggccactggatcggcagacgccaccgtcagaatctgggactacgacacc
cgcgctcaaatgcggctcttccgcggccacagggcccccatcaaagcccttgcgtactcc
gtgtgcgggcgcttcctggtctctggtggccgagatgacctgatcattgtttgggacaca
accaacgagcgaatgctacactgcatgatatggcacaacgcaatgattgaatcgataggt
ttctcccactgcaacaatctgatggttgtttggggcaaggactgccacctgagtactttt
gactttcagcttctcgtcaggtcccccgagatggagttatcatccacaaaagccatcatt
gatcagtcgctaatcagcacggttcagtccccgcgaaatcgaattttccttaaaagtggc
ttcgtcgatcgcaatcgcctggttgccatttgcaagataaattcttaa
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integrated database retrieval system
