Drosophila miranda: 108161421
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Entry
108161421 CDS
T06132
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmn03041
]
108161421
Spliceosome [BR:
dmn03041
]
Common components
Common spliceosomal components
General mRNP proteins
108161421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RBD_DEAH11
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
108161421
NCBI-ProteinID:
XP_017151170
LinkDB
All DBs
Position
4:4839564..4845348
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AA seq
632 aa
AA seq
DB search
MAEDFDVEAMLEAPYQKNSVSAGSGGRGGRGRSDGSDDSPRGGGGGPQAEINDGHAHNGT
RNGGSSSGGGASSKKKPTKRSRSRSGSRDNKSRRERGDRSGGGDRGDRGGDRSSYRDKEK
DRERDRHRDAGKRPGNDRERDKQERSRRSRSREERGGGGGGGAGGAADDRRVRYNDRGER
DRRSRDRRDGSKPIQRDRSRDRRRRSRSREQPRKRLSPVRERKRSPSRPRDKTSTRRRGS
YSPRRRSQPNGSGGGGGGDRTPPTELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKV
RDVRLITCNKTKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAT
PAFQPKSHVGPMRLYVGSLHFDITEEMLRGIFEPFGKIDAIQLIMDTETNRSKGYGFITY
HNAEDAKKALEQLNGFELAGRPMKVGNVTERLDMNTTSLDTDEMDRTGIDLGATGRLQLM
FKLAEGAGLAVPQAAANALLATAPQPAPVQQQQATPSIATQCFILSNMFDARTETNPTWD
VEIRDDVLEECAKHGGVLHIHVDTASPTGTVYVKCPSTTTAVLAVNALHGRWFAGRVITA
AYVPVVNYHSMFPDSVGTSELVALTRKNTDDD
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggactttgatgttgaggcaatgctcgaggcgccgtaccagaaaaacagtgtc
agtgcgggcagcggtggacgtggaggacgcgggcgcagcgatggcagtgatgacagtccc
agaggcggcgggggtggtccgcaggcggagatcaacgatggtcatgcacacaatggaaca
cgcaacggcggcagcagcagtggcggaggcgccagttcaaagaaaaagccaacgaaacga
tctcgcagtcgcagcggttcgcgtgataacaaatcgagaagagagcgtggagatcgcagc
ggcggtggagatcgtggcgatcgcggtggtgatcgcagcagttatcgcgacaaggagaaa
gatagagagcgggatcgccatcgtgatgctggcaaacgtcctggcaacgatcgggaacgg
gacaagcaggagagatcacgtcgcagtcgatcaagagaagagcgcggcggcggcggagga
ggaggagcaggaggcgctgccgatgatcgtcgtgtacgctataatgatcgcggcgagaga
gatcgccgctctcgggatcgtcgagatggcagtaagcccatacagcgcgatcgatccagg
gacaggcgtcgacgcagtcgctcacgtgaacagccgcgcaagcgactgagtccggtacgt
gaacgcaagcgtagtccttcgcgaccaagagataaaaccagtactcgtcgtcgtggcagc
tactcgccccgccggcgatcacaaccaaatggaagcggcggtggtggtggcggcgatcgt
acaccgcccaccgagctgagtcccgaggagcgggatgctcgcactgtgttctgcattcag
ctgtcgcaacgtgtccgggcccgtgatctggaggagttcttctctagcgtgggcaaggtg
cgcgatgtgcgtctgattacgtgcaacaagacgaaacgattcaaggggattgcctacatc
gagtttgaggatcccgaatcggtggccctcgctttgggcttgtccggccagcggctgctc
ggcgtacccattatggtgcagcacacgcaggccgagaagaatcgcctacagaatgcaacg
cctgcattccagcccaagagccacgtgggtccgatgcgcctgtacgtgggatcgctgcac
tttgatatcaccgaggaaatgctgagggggatattcgaaccatttggcaagatcgatgct
attcaactgattatggacacggagaccaatcgctctaagggatacggatttattacgtac
cacaatgctgaagatgccaaaaaggctttggaacaattgaatggcttcgagctcgctgga
cgtcccatgaaggtgggaaatgtgaccgaacgtctggatatgaacaccacctctttggac
acggatgagatggatcgcactggcattgatctcggcgccacaggacgactccaattgatg
ttcaagctggcggagggagcaggtcttgcagtgccccaggcggcggccaatgcgctgttg
gccacagcaccgcaaccggcaccggtgcagcagcagcaggcgacaccatcgatagccaca
cagtgcttcatactgtcgaatatgtttgatgcgcgcacggagacgaatcccacctgggac
gtagagatacgcgacgatgtgctggaggagtgcgccaagcatggcggtgtgctgcacatc
catgtggacaccgcctcgcccacgggcaccgtatacgtaaagtgtccgagcacaacgacg
gcggtgctggcggtgaatgcgctgcacggccggtggtttgccggacgcgtcattacggcc
gcatacgtgcccgtggtcaactatcactcaatgtttccggattcagtgggcacctccgaa
ttggtggcactgacgcgcaagaacaccgacgacgattga
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