Entry |
|
Name |
(RefSeq) probable RNA helicase armi isoform X1
|
KO |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:dmn00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108161504
03015 mRNA surveillance pathway
108161504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:dmn03019]
108161504
Enzymes [BR:dmn01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108161504
5.6.2.5 RNA 5'-3' helicase
108161504
Messenger RNA biogenesis [BR:dmn03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108161504
mRNA cycle factors
Common to processing body (P body) and stress granule
108161504
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
XR:4392688..4395322
|
AA seq |
190 aa
MATYSKLFYDYELIPTVSEKDSREATLLATVQSLLGTGKPRNHGVCFFEMKGQDMQHPDS
ASWYDDLEATELYLMVLSLYCRGVTSDQIGLLTPYAKQAKTLRGMFMDTDIVMPKVDSIE
KFQGQERDIMLISTVRSTGDHISHKRIILAIARARAFLVIYGNPHLLSVDDNWRHLINHS
FISKWNTNKY |
NT seq |
573 nt +upstreamnt +downstreamnt
atggccacatatagtaagctgttctatgactatgaattgataccaacggtatccgagaag
gattcccgagaggccaccttgttggccacagtgcagtccctactaggtactggcaagccg
cgcaaccacggtgtctgtttctttgagatgaaggggcaggatatgcagcacccagactct
gcctcgtggtacgatgatctcgaagccacggagttatatctcatggtcttatcgctgtat
tgtcgcggagtgacttccgaccaaattggtcttctgacgccctatgcgaagcaggcgaag
acgttaaggggcatgttcatggacacagatattgtcatgccgaaggttgactcgattgaa
aagttccaaggacaggagcgcgacataatgctgatttccactgtgcgctccactggagac
catataagccataagcgcataattttggccatagcgcgcgcccgcgcatttttggtcata
tacggtaatccccatctcctcagcgtcgacgacaattggcgtcatctcatcaaccatagc
tttatttccaaatggaatacaaataaatattag |