Drosophila miranda: 108161639
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Entry
108161639 CDS
T06132
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
dmn
Drosophila miranda
Pathway
dmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108161639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108161639
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108161639
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
108161639
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Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
108161639
NCBI-ProteinID:
XP_017151430
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All DBs
Position
4:22071693..22072963
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AA seq
205 aa
AA seq
DB search
MSSEGDENTVVCLPGERLCRVEDNVVLGIGTYEQNGYIYASKSGVVNIEESGENCQVVSV
HKPGFHLTIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRETEKDR
VDIYKSFKPGDVILARVINQMEQSFLLTTAETELGVVVAYASDASKTRVPMVPVGWSEMQ
CPLTTIKEPRKVAKVLPESSINIIK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagaaggagatgaaaatacagttgtgtgcttgccaggagaacgcttgtgccga
gtagaagacaatgttgttttgggcataggcacatacgaacagaacggctacatctacgcc
tccaaatcgggggtcgtgaacattgaagaatctggagaaaactgtcaggttgtaagtgtt
cacaagccaggcttccacctgaccattccggccaccggggacgtcgtcacagcccgtgtt
ctggtcacaacaccaaagttcgccaagtgtgccatattctgcgtgcgaaacgtcttgctg
gagagcagctatcgcgggctgctgcggaaggaggacgtgcgggaaacagaaaaggatcgt
gtcgacatatacaagtcgttcaagcctggcgatgtgatactggcccgcgtcatcaatcaa
atggaacaatcatttctcctaaccactgccgaaacagagctcggtgtggtcgtagcctat
gccagcgatgccagtaaaacccgagtgcctatggtgccggtgggctggagcgagatgcag
tgtccactgactaccattaaggagccccgcaaagtggcaaaagtcctgcctgaaagttca
ataaatataatcaaataa
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