Drosophila miranda: 108161674
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Entry
108161674 CDS
T06132
Name
(RefSeq) DNA mismatch repair protein spellchecker 1
KO
K08735
DNA mismatch repair protein MSH2
Organism
dmn
Drosophila miranda
Pathway
dmn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108161674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmn03400
]
108161674
DNA repair and recombination proteins [BR:
dmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108161674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
FAM184
DUF1802
Motif
Other DBs
NCBI-GeneID:
108161674
NCBI-ProteinID:
XP_017151470
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All DBs
Position
4:complement(13428038..13431711)
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AA seq
914 aa
AA seq
DB search
MQAKATESRREPTLHMDTNARRNFIKYHAKLGEKPSTTVRFYDHSDCYTVNGSDDCELVA
KIVYKSTAFIGALLPDDKETLQFVALSKGNFEMAVRELLLVRNLRVEVYVKRNEWQLEYR
GSPGNLLQFEDILFANKEVLVSNNMISLQVKLEGGAQRRVGVASVEQNDCQFQLLEFLDD
DFFTELEATVVLLGPKECLLPSVEGEYVPVKALLERNGVMITVPKKSSANDLLQDLNRLL
RFAKGQQEDATGLKELQMLLASESLKVAIKYLDLVNDAGNLGHYEIKQLDLKRFVHLDSA
AVGALNIMPKPGTHPSMPSYRWQSILGVLDHCRTPQGHRLMGKWVKQPLRSQEILNDRHN
IVECLLESSDTLETLSLDYLKRIPDILMLTKKLMRRKATLQDLFRIYQVILRTPKIVQVL
LSLENSTVESVICSPFKSFLEDLTGLKQMVEQVVDFEAIERGEYLVKSSFDSRLMELQET
MNELYDKMERLKSKCNDELDLDSKQIKLENVAKLGYHFRTTLKDDSVLRKKKNYRIVDVI
KGGVRFTSDKLEGYADEFASCHSRYEEQQLSIVEEIIQVAVGYAAPLTSLNNELAQLDCL
VSFAIAARSAPTPYVRPNMLAEGAGKLVLTDVRHPCLELQEHVSFIANSVYFKKDKCNMF
IITGPNMGGKSTYIRSVGTAVLMAHVGAFVPCGMATISMVDSILGRVGASDNIIKGLSTF
MVEMIETSGIIRTATDKSLVIIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFH
EITKLAETLPTVKNCHMAALADADNFTLLYQVRPGVMEKSFGIQVARLANFPENVVQNAQ
EVYNEFEDEHADKKNQEDKALLEKIQVAIQQLSTAGNNTEINVEDLTQLVTQFTQDIKQL
DSDYFKSVLASSEA
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccaaagccactgaaagccgtcgggagccaacgctgcacatggacacaaatgcg
cgtcgcaatttcataaagtaccatgccaagctcggcgagaaacccagcaccacagttcgc
ttttacgatcactcggactgctatacggttaacggcagcgatgactgcgagcttgtggct
aagattgtctacaagtccactgcgtttattggggccctgctgcccgacgacaaggagact
ctgcagttcgtggccctgtcaaagggtaactttgagatggcagtgcgggagctgctcctg
gtgaggaatttgcgcgttgaggtctacgtgaagcgtaatgaatggcagctggagtaccgc
gggtctccgggcaatctgctacagttcgaggacatcttgtttgccaacaaggaggtctta
gtgagcaacaacatgatctcacttcaggtcaaactcgagggtggcgcccagcgacgcgtg
ggcgtggccagtgtggagcagaatgattgtcagttccaattgctcgagtttctagacgac
gacttcttcacggagctggaggctacggttgtcctcttggggccgaaggagtgtttacta
ccctcggtagaaggagaatatgtgccagtcaaagctttgctggagcggaatggtgtgatg
attactgtgcccaagaagagcagcgccaacgatctcttgcaggacctgaatcgtttgttg
cgattcgccaaaggtcagcaagaggatgccaccgggctgaaggagctgcaaatgctgctg
gcttcggaatccctaaaggtggccataaagtacttggacttggtcaacgacgctggcaac
ttgggacactacgaaatcaagcaactagatctaaagcgatttgtccatttggactcggct
gctgtaggtgccttaaacattatgcccaagccggggactcatccgtccatgccctcgtat
cgctggcaaagcattttgggtgtcctggatcactgcagaactcctcagggccaccgactc
atgggaaagtgggtgaaacaaccactgcgtagccaggagattctaaacgaccgtcataac
atcgtagagtgtcttttggagtcgtcagataccctcgagacccttagcttggattatcta
aagcgcattccagacattctgatgctgacgaagaagttgatgcgccgcaaagccacgttg
caggacctgtttcgcatctatcaggtcatattacgaactcccaagattgtgcaggttctg
cttagtcttgagaactcgacggtcgagagtgtgatttgctctccctttaaaagcttccta
gaggatctaaccgggctcaagcagatggtcgagcaagtagtcgactttgaggcgatcgaa
aggggagagtacctggtcaaatcctcctttgacagccgcctgatggagctccaggagacg
atgaatgagttgtacgacaaaatggagcgcctgaagtccaagtgcaacgatgaactggat
ctggacagcaagcagatcaagctggagaatgtggccaagttgggataccatttccgtaca
accctgaaggatgactctgtgcttcgcaagaaaaaaaactatcgcatcgtagacgtgatc
aagggcggtgtgcgcttcacctccgacaaactggagggctatgccgatgagtttgccagc
tgtcacagtcgctacgaggaacagcaactatcgatcgttgaggagatcatacaggtcgct
gtaggctacgctgctccattgacctctcttaacaatgaactggcccagctggactgtttg
gtcagcttcgctatcgccgcccgcagtgctcccactccctatgtccgtcccaacatgcta
gcagaaggagctgggaaactggttctgacggatgtgcgtcatccctgcctggagctgcaa
gaacatgttagcttcatagccaacagtgtttacttcaagaaggacaaatgcaacatgttc
atcatcacgggccccaacatgggcggaaagagcacatacatacgctcagttgggactgcc
gtactgatggcccatgttggtgcctttgtgccttgcggcatggccaccatcagtatggtg
gattcaattctgggtcgtgtgggagccagcgacaatattataaagggcttaagtactttc
atggtggagatgattgagacttcgggtattataaggactgctactgacaagtcattggtc
attatcgacgagttgggacgcggaacatcgacctacgagggttgtgggattgcctggtca
attgccgagcatctggccaaggaaaccaaatgcttcacgctcttcgccacccacttccat
gagattaccaagctggccgagactttgccaacagtaaaaaactgtcacatggctgcgttg
gccgacgccgacaactttacgctgctctaccaggtgcgtcctggtgtgatggagaagagc
tttgggattcaggtggcccgtctcgcaaacttccccgagaatgtggtgcagaatgcccag
gaggtatacaatgagtttgaggacgagcatgcagacaaaaagaaccaggaggacaaggca
ttgcttgagaagattcaggtcgccattcagcagctctcgacggctggcaacaatacggaa
ataaatgtagaggaccttactcagctggtcacacagtttacgcaggacatcaagcaacta
gacagcgactacttcaagtctgttctggcctccagtgaggcttag
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