Drosophila miranda: 108161830
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Entry
108161830 CDS
T06132
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
dmn03015
mRNA surveillance pathway
dmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108161830
09122 Translation
03013 Nucleocytoplasmic transport
108161830
03015 mRNA surveillance pathway
108161830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108161830
03041 Spliceosome [BR:
dmn03041
]
108161830
Enzymes [BR:
dmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108161830
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108161830
Spliceosome [BR:
dmn03041
]
Complex C
Other components
EJC/TREX
108161830
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108161830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108161830
NCBI-ProteinID:
XP_017151678
LinkDB
All DBs
Position
4:complement(15089388..15092286)
Genome browser
AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTETTAVENQVAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPADNNTCHVLVMCHTR
ELAFQISKEYERFSKYMPTVKVAVFFGGLAIQKDEETLKSGTPHIVVGTPGRILALIRNK
KLNLKHLKHFVLDECDKMLEQLDMRRDVQEIFRSSPHGKQVMMFSATLSKDIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVAL
AVLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITFVSDDNDAKILNEVQDRFDVNISELPEEIDLSTY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccgataatgacgatcttctcgactacgaggatgaggagcagactgagaccactgcg
gtcgagaaccaggtggccccaaagaaagatgtcaagggcacttacgtctccatacacagt
tctggcttccgtgattttctgctgaaaccagaaattttgcgcgccattgttgactgtggt
tttgagcatccatccgaagttcagcacgagtgcattccgcaggctgtactcggcatggat
attctctgtcaggccaagtcaggtatgggcaagacggctgtcttcgtgctcgccacgctg
cagcagctcgagcccgccgacaacaacacctgtcatgtgttggtcatgtgtcacacacgc
gagctggcattccagattagcaaggagtatgagcgtttctccaagtatatgcccacagtc
aaggtggctgtcttctttggcggtttggccatacaaaaggacgaggagaccctcaagagc
ggcactcctcatatcgtggttggcacacccggtcgcattctggccctgatacggaacaag
aaactgaatctgaagcatttgaagcattttgtactcgacgagtgcgacaagatgctggag
cagctagatatgcgcagggatgtgcaggaaattttccgtagctcaccccacggaaagcaa
gtgatgatgttctctgccacattgagcaaggacatacgtcccgtgtgcaaaaagtttatg
caagatcccatggaggtgtacgtcgacgatgaggccaagctgacgctgcatggcctgcag
cagcactacgttaatctcaaggagaacgagaagaacaagaagctgttcgagctgctcgat
gtgctcgagttcaaccaggtggttatttttgtcaagtcggtccaacgttgtgtggccctg
gcggtgctgctgaccgagcagaatttcccagccattggaatccatcggggcatgacacag
gaggaacggttgaatcggtatcagcaattcaaggatttccaaaagcgcattttggtggcc
accaatctgtttggccgcggcatggacattgagcgtgtgaacattgtgttcaactatgat
atgcccgaggactccgacacctatctgcatcgtgttgcccgtgcgggtcgtttcggtacc
aagggtctggccattaccttcgtctcggacgataacgatgccaagatacttaacgaagta
caagatcgtttcgatgtcaacattagtgagctgccggaggagattgacctgtccacatac
attgagggacgctag
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