KEGG   Drosophila miranda: 108162396
Entry
108162396         CDS       T06132                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
dmn  Drosophila miranda
Pathway
dmn03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dmn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108162396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dmn03021]
    108162396
   03036 Chromosome and associated proteins [BR:dmn03036]
    108162396
Transcription machinery [BR:dmn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108162396
   Coactivators
    SAGA/TFTC/STAGA complex
     108162396
Chromosome and associated proteins [BR:dmn03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     108162396
    STAGA complex
     108162396
    TFTC complex
     108162396
    SAGA complex
     108162396
    SLIK complex
     108162396
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st WD40_Gbeta WDR55 Beta-prop_WDR75_1st EIF3I Beta-prop_VPS8 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR19_1st CFAP251_N ASA1 WD40_MABP1-WDR62_2nd Beta-prop_Aladin DSE1_N Beta-prop_SCAP Beta-prop_NOL10_N ANAPC4_WD40 Beta-prop_WDR75_2nd Beta-prop_Nup120_160 KNTC1_N NBCH_WD40 Beta-prop_ACSF4 Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_IFT140_2nd TRM82_WD Beta-prop_EIPR1 SHKBP1_KCTD3_C Beta-prop_SPT8 Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 108162396
NCBI-ProteinID: XP_017152608
LinkDB
Position
4:complement(30226060..30227796)
AA seq 400 aa
MWKMSDVFPRPKTQENAASGISASHRSEPNHAPQRVEVSGGSRPDETPTEAQQLSTFVAA
SDHHVEGVVLCVLISETVSLMAVSKADSLVHVFGLRLYSAGADADWIADGGFNLVGHEVP
ATHGAFSDNRPYIVTWAPDLKLRLWNLSSRNCTGIFVNTHSHVSRILFEAHGLFFASIDE
LGYAFIWMIDELRSSNKLRYVDKNYYSQPLTACGFHPKITYLVTGSTDGTVRMWNMAKGT
TAVRTFLGHKTTITAVAFSICGSYLVAGATDGLLIVWNVKSQVLLRRLGHHSGAITSIGF
SPNNGRLAVGSMDTQMSVWDFELLVRITVAGRASVTEDMLVGTRASECGPIFAVRFVSDS
HLMSICVEKREASAEPEEDLSLFFEDMEAEESELEPKEDE
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgtggaagatgtccgatgtattcccaagacccaagacccaagaaaatgccgctagcggc
atcagtgctagccatcgaagcgaacccaatcacgctccccagcgtgtggaggtgtccgga
ggcagcaggccggacgagactcccacggaggcacagcaactgtcgacctttgtggccgcg
agcgatcaccacgtcgaaggagtggtgctctgcgttttaatctcggagaccgtcagcctg
atggccgttagcaaggccgacagtctggtgcacgtgttcgggctaaggctctattcggcc
ggagcggacgctgactggatcgctgacggcgggttcaacctcgtcgggcacgaagtgccg
gccacccacggcgccttttccgacaaccggccgtacatagtgacctgggcgccggatctg
aagctgcggctgtggaatctgagctcccggaactgcacggggatctttgtgaacacccac
agccacgtcagccgcattttgtttgaggcccatggcctcttcttcgccagcatcgatgaa
ctgggctatgccttcatctggatgatagacgaattgcgctccagcaacaagttgcgttac
gtggacaaaaactactactcgcagccgctgacggcctgcggatttcacccgaagataacc
tacctggtcactggctctactgacggcacggtccgcatgtggaacatggccaaaggaacc
actgcggtgcgcacctttctgggccacaaaaccaccatcaccgccgtggccttctcgatc
tgcggttcctacttggtcgcaggtgccaccgacggtctgctcattgtctggaatgtgaag
agtcaggtgctgctgcgccgcctgggccaccattcgggagcaatcacctcgattggcttc
tccccgaacaacggccgtttggcggtggggagcatggacacccagatgagcgtgtgggac
tttgagctcctcgtgcggatcacggtcgcgggccgggcctctgtcacggaggacatgcta
gtgggcacgcgagccagcgagtgcggacccatcttcgcggtgcgcttcgtcagcgactcc
cacttgatgtcaatctgcgtggaaaagcgcgaggcgagcgcggagcccgaagaagatttg
tccctgttctttgaggacatggaggctgaggagtcggagctggagccaaaggaagacgaa
tag

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