KEGG   Drosophila miranda: 108162399
Entry
108162399         CDS       T06132                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
dmn  Drosophila miranda
Pathway
dmn03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dmn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108162399
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dmn03021]
    108162399
   03036 Chromosome and associated proteins [BR:dmn03036]
    108162399
Transcription machinery [BR:dmn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108162399
   Coactivators
    SAGA/TFTC/STAGA complex
     108162399
Chromosome and associated proteins [BR:dmn03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     108162399
    STAGA complex
     108162399
    TFTC complex
     108162399
    SAGA complex
     108162399
    SLIK complex
     108162399
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40 WD40_CDC20-Fz EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_RIG_2nd NBCH_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_NWD2_C PROPPIN Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 108162399
NCBI-ProteinID: XP_033249561
LinkDB
Position
4:complement(30222813..30224216)
AA seq 342 aa
MSESEMIKQPKEENATGSTGEESLKATFVAVSVLHVGGEAICASLSEDTSLLAVARADCS
VHVLRLKLHVSGAKADWTHGKTTTLSGHQATVYLGSFSTDGSQLLTCSADFGMRMWNVQS
GRCLAFCRQTTSFIRGIAFISYASSYATVEDVGYASIWRADGEKIVCTKRVFQEQELKVC
IFHPKKKYVVSGSTSSKVRIWDPAWDRYTTDLIDFNSTAITALAFTSCGSYMAAGVAEGQ
VILRNMNSKLVVCIFHQHAAAITSMAFDRDNFRLAVGSRDAKMSVWEFGAPAMESRASDC
GRVLKVSFVSDSHLVGICVDGEESNPLALKAPTGSSSPRDFF
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgtcggaaagcgagatgatcaaacagccgaaggaagaaaacgcaacgggctcgacaggc
gaggagtcgctcaaggcgaccttcgtggccgtgagcgtgctccatgtggggggggaggca
atctgcgccagcctctcggaggacaccagcctgctggccgtggccagggcagactgctcg
gtgcacgtccttcggctgaagctccatgtgagcggcgcaaaggcggactggacccacggc
aaaacgaccaccctcagcggtcaccaggccaccgtctacctcggatcgttctcgaccgac
gggtcgcaactcctgacgtgctcggcggacttcggcatgcgcatgtggaacgtacagtcc
ggcagatgtttggccttctgcaggcaaaccaccagcttcattcgaggcatcgccttcatc
tcgtacgcctcttcatatgccaccgtcgaggacgttggctacgcatccatctggagggcg
gacggagagaagatcgtttgcacgaagagagtgttccaggagcaagagctgaaggtctgc
atattccatccgaaaaagaaatacgtggtctctggatcgacttccagcaaggtccgcata
tgggaccccgcctgggaccgctataccacggacctcatcgacttcaacagcactgcgatc
actgccctggccttcacctcgtgcggcagctacatggccgcgggtgtcgccgagggccaa
gtcatcttgcggaacatgaactccaagctcgtggtgtgtatctttcaccagcacgcggct
gccattacctcgatggccttcgacagggacaactttcgcctagccgtgggcagccgggac
gccaagatgagcgtctgggagtttggggcaccggccatggagtcgcgggccagcgactgt
ggacgcgtgctgaaggttagcttcgtcagcgactcccacctggtgggcatctgcgtcgac
ggggaggagagtaacccacttgcactgaaagccccaactggctcttcgagcccgcgagat
tttttctag

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