Drosophila miranda: 108162423
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Entry
108162423 CDS
T06132
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
dmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108162423
09122 Translation
03013 Nucleocytoplasmic transport
108162423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108162423
03041 Spliceosome [BR:
dmn03041
]
108162423
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
108162423
Spliceosome [BR:
dmn03041
]
Complex C
Other components
EJC/TREX
108162423
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108162423
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Cupin_NOL9
Motif
Other DBs
NCBI-GeneID:
108162423
NCBI-ProteinID:
XP_017152639
LinkDB
All DBs
Position
4
Genome browser
AA seq
1652 aa
AA seq
DB search
MRRLKKLSKSHSVTVTPGSDGSSATTAMETATVAAASTASDTNGGSGAGSVLNPDIFKHF
DKAGRSEFLKYLKQQLQESADSPVYDQNGVFRQGVSNAIYELLWQALRFTHKKDLILHLL
TEVVAIHKDFPSLIVDVVNILDSETSLMTEGLQEERHGFVQLVKDMDKVVPESLLKERLE
IDTLQEVGIVKNKGFYSKFIKVKTKLYYKQRRFNLFREESEGFAKLITELNQDFEESTTP
ESIMDIIKSLIGCFNLDPNRVLDIIIESFETRPDRWQLFIPLLRSYMPTGAIICEVLGYK
FCHFKDSRTPRSLYHVCALLLKHEVIELNDVYVWLTPNDGSIKANWVQELSDAREMVRKL
NLISTNKKEDDKEPPPPPPTVKRFDEEKYNLNQKFGLCEALLKVGDWENAHRIIQKLPEQ
SVVIQEPIARAIVELIHLSVEHIYYKKCFKAPAGRKQSRNRLYDDAKLVAKMQAREFVDL
RKYTWPMANVLGPAMHCDTVLMYKLIRIMSKLIVEMGVDSMNGPPPNSEAEKHYYDIMTC
MDSCILPSLLYLDNNCSMSEEIWAVLKYFPYHFRYSLYARWKNDSYQLHPNLIRRSGLAM
RDIKGLMKRVSKENVKQLGRLVGKYCHCAPGLMFDYILLQIQMYDNLIAPVCDMLKFLTS
LSFDCLGYCIIESLTLTGRGRFKDDGTSLSLWLQSLASFCGTIYKKYSIELSGLLQYVAN
QLKSQKSLDLLILREIVHKMAGVESCEEMTNEQLQALCGGEQLRGEAGYFSQVRNTKKSS
NRLKEALANNDLAVAICLLMAQQKHCVIYRETAAHSHLKLVGNLYDQCQDTLVQFGTFLG
STYSVDEYVERLPSIITMLREYHINTDVAFFLARPMFTHQINQKYDQLRKSDPNAKKLTT
TQRMQKYLDATQLIMNPIVESVRPLHSAKVWEDISPQFLVTFWSLSMYDLHVPNDSYQRE
IGKLKQLAHQAAEGKDSNQSKNKKEQERYIALMEKLNDERKKQHEHVDKIQQRLQEQRDS
WFLLRSAKSAKNDTITQFLQLCLFPRCTFTALDALYCAKFVHTIHNLKTANFSTLLCYDR
IFCDITYSVTSCTEGEATRYGRFLCAMLETVMRWHADQAVFNKECANYPGFVTKFRVSNQ
FSEANDHVGYENYRHVCHKWHYKITKAIVFCLDSKDFMQIRNALIILMRILPHYPVLAKL
AQIIERKVDKVREEEKTKRPDLYVIASSYIGKLKLKTPSMFKESDFHQLPERLPTKDSQE
PEAPGTGSGPSIKVLASDKVATQGLTSSTATKSGGSATSFYNSEQNATGKERDVKSSLSM
RHDSKPTDPRVPPSSTANSAPSERESKQRDLPGARESHSRLTKDELHLHQEQQFQSGSIN
ASNGSSQNDRHSREVDREREHEQRHSSLTSSHRSSRETNNRPKERTEAELNQRVRERAQR
QEELEAAAAQRNQKREKTSRREERNRHEGLKTVDLVASNSTEHRQFDEYEGRHRDRDLSS
VSNESNGSMQHRRSLEAIEYEKDSKRRKLESSSSSSKKVEELVDSVKKARLKTKERNKDK
LSDEERDARKDRKLGRKRDRAEESNNVEHKRRREAQNGDDDLRERNRDKSPRERSHEKFD
RERGGGAAGGSSSRGDDRQYSIKTTRSSRVNY
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgcttgaagaaattgtcgaagagtcacagcgtgacggttacaccggggagcgat
ggcagcagtgcgacaacggcaatggagacggcgacggtagcggctgcatcgacggcgtcc
gacacaaatggagggtccggcgcaggcagtgtcctgaatccagatatatttaagcatttc
gacaaggccggcagaagtgaatttttgaaatacctcaaacaacagctgcaagaaagtgcc
gacagtcccgtatacgatcagaatggagtcttcaggcagggcgtctcgaatgccatatac
gagctgctctggcaagcattgcgcttcacccacaagaaggatcttatccttcatctgctc
acagaagttgtggccatacataaggatttccctagtctcattgtggatgtggtcaatatt
ttggacagcgagacttcccttatgacagagggcctgcaagaggagcgtcatggttttgtg
cagctcgtcaaggatatggacaaggtggtgccagagagtttgctcaaagagcgcctggag
attgatacgctgcaggaggtggggattgtgaagaacaagggtttctactccaagttcatc
aaggtcaaaaccaagttgtactacaagcagcgacgctttaatctattccgcgaggaaagc
gaaggctttgccaagctgataaccgagctgaatcaggactttgaggagagcaccactccc
gagagcattatggacattataaaatcgctgataggttgcttcaatctggatcccaaccgc
gtgctggatatcataattgaatcgtttgaaacccgcccggatcgttggcaattgtttata
cccttgctgcgcagctatatgcccacgggtgccattatttgtgaagtactcggctacaag
ttctgccattttaaggactctcgtacgccccgatctctgtaccatgtgtgcgcgctgctg
ttgaagcacgaggtgattgaactgaacgatgtgtacgtctggttgacccccaatgatggc
agcatcaaggccaactgggtgcaagagctgtcggatgcccgagaaatggtgcgaaaactg
aatctgatctccaccaacaaaaaggaagacgacaaagagccaccaccaccgccgccaacc
gttaagcggtttgatgaggaaaagtacaatcttaatcaaaagtttggtctctgcgaggct
ctgctcaaggtgggggactgggagaatgcccacagaatcatacaaaaactgccggaacaa
tcggtggtcatacaagagcccattgcccgtgccattgtcgaactgattcatttgtccgtg
gagcatatatactacaagaaatgcttcaaagcccccgccggacgcaaacagagtcgcaat
cgtttgtacgatgatgccaagctggtggccaagatgcaggcccgtgaatttgttgatctg
cggaagtatacatggccgatggctaatgttttgggcccggcgatgcactgtgacacggtg
ctaatgtacaaactgatacggattatgagcaagctaattgtggagatgggtgtcgacagc
atgaatggcccgccgcctaattcagaggcggagaagcattactacgacataatgacctgc
atggattcgtgcatactgccatcgctgctgtatttggacaataattgttccatgtccgag
gagatttgggctgtgctcaagtatttcccgtatcattttcgatacagtttgtatgcccga
tggaaaaacgatagctaccagctgcatccgaatctgatacgacgcagtggcttggccatg
cgcgacatcaaggggctgatgaagcgtgtcagcaaggaaaatgtaaagcaattgggtcga
ctggtgggcaagtactgtcactgtgctcctggactgatgtttgattatatactcctgcaa
atccagatgtacgacaaccttatcgcacctgtctgtgacatgttgaagttcctgacatct
ctgtcctttgattgcctgggctattgcatcattgaatcgctgactctgacgggtcgtggc
aggttcaaagacgacggcacttcgctttccctgtggctgcaaagtctggcctccttttgt
gggaccatctacaaaaaatacagcatcgaattgagcggcctgctgcagtatgtggccaat
caattgaagtcacagaagagcctggatcttctaatactacgcgagattgtgcacaagatg
gctggcgtggagtcgtgcgaggagatgaccaacgaacagctgcaggctttgtgcgggggc
gaacagctgcgcggcgaggcgggctatttcagtcaagtgaggaacactaagaagtcatcg
aatcggctgaaggaggccctggccaacaatgatctggctgtggccatttgtctgctgatg
gcccagcagaagcattgtgtgatctatcgtgaaacggcggcgcatagtcatctgaagctg
gtggggaatctttatgatcagtgccaggacacgctagtgcaatttggcacctttttgggt
tccacctattcggtggatgagtatgtggagcgactgccatcgatcataacgatgctaagg
gagtatcacatcaatacggatgtggcattctttctggcgaggcccatgtttacacatcag
attaatcaaaagtacgatcaattgcgtaaatccgatccgaatgccaaaaaactgaccacc
acacagagaatgcaaaagtatctggacgccacacaactcatcatgaaccccattgtggag
tctgtgcgtccgctgcatagtgccaaagtgtgggaggacataagtccgcagtttttggtg
accttctggagcctcagcatgtacgatctgcatgtccccaacgatagctaccagcgtgag
attggaaaactcaagcaattggcccatcaggcggccgagggcaaggactccaaccagtcc
aagaacaaaaaagaacaagagcgatacattgctttgatggagaagctaaatgatgagcgg
aagaagcaacacgagcatgtggacaagatacagcagcgtctgcaagagcagagggacagc
tggttcctgctgcgttcggccaagtccgccaagaacgataccattacgcagttcctgcaa
ttgtgcctgtttccgcgctgcactttcactgccctggatgcgctctattgcgcaaagttt
gtccataccatccacaatctaaagacggctaatttttccaccctgctgtgctacgatcgg
atcttctgtgacattacctactcggtgacctcttgcacggagggcgaggcgacacgctat
ggccgctttctgtgcgccatgctggagactgtgatgcgctggcatgccgatcaggccgtt
tttaacaaggagtgtgccaattatcccggctttgtgaccaaatttcgtgtcagcaatcag
ttctcagaggccaacgatcacgtgggctacgaaaactatcgacatgtgtgccacaagtgg
cactataagatcaccaaggccattgttttctgtctagactcgaaggactttatgcagata
cggaatgcactgatcattctcatgcgtatacttccacactatcccgtactggccaagctg
gcgcagatcattgaacggaaggtggacaaagtgcgcgaagaggagaagaccaaacgccca
gatctgtatgtcatagcctccagctatattggcaaactgaagctgaagacaccgagcatg
ttcaaggagagtgactttcatcagttgcctgagcggttgcccactaaagattcgcaggag
ccggaagccccaggcactggtagtgggcccagcatcaaagtgttggcctcggataaggtg
gcaacacaaggtcttacctcatcaacggccaccaagtcggggggcagtgctacgtccttc
tacaacagcgaacaaaatgcaaccggtaaagaacgagatgtaaagtcatctctcagcatg
cgccacgactcgaaacccaccgatccccgggtgccaccatcatccaccgccaactcagcg
ccgtccgaacgggagagcaagcaaagagatctgcctggagctagagagtcacactcccgc
ctcacgaaggatgagctgcatctgcaccaggagcagcagttccagtctggcagcatcaat
gccagcaatggcagcagccaaaacgatcgtcacagccgtgaagtggatcgtgaacgggag
cacgagcagaggcacagcagcctcaccagcagccatcgcagctcccgagagaccaacaat
cgccccaaggagcgtaccgaagcggagctgaatcagcgtgtccgagagcgtgcccaacgc
caggaagaactggaggcggcagcagcccaacgtaatcagaagcgagagaagacatcgcga
cgtgaggagcggaatcgacacgagggtctgaaaacagtggatctggtggccagcaactca
actgagcatcgacagtttgacgagtacgagggccgccatcgggatcgtgatttgagctct
gtttcgaacgagagcaatggttccatgcaacacagacgcagccttgaggctattgaatac
gaaaaagattcaaagcgtcgcaaattggaatcatcgtcgagcagttcaaagaaggttgag
gagctcgtcgacagcgtgaagaaggcgcgtctcaaaaccaaagagcgcaacaaggacaag
ctgtccgatgaggaacgggatgcgcgcaaggatcgcaaactgggacgcaagcgggaccgc
gccgaggagtccaacaatgtcgagcacaagcgacggcgcgaagcacaaaacggcgatgat
gatctgcgtgagcgaaacagagataaatccccacgagagcgttcacatgagaagtttgac
agagaacgaggtggtggagctgcgggcggcagtagttcgcgaggcgacgatcgacagtac
tctatcaaaacaacacgctcctccagggtcaactactaa
DBGET
integrated database retrieval system
