Drosophila miranda: 108162457
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Entry
108162457 CDS
T06132
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
dmn
Drosophila miranda
Pathway
dmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108162457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108162457
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108162457
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108162457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
Motif
Other DBs
NCBI-GeneID:
108162457
NCBI-ProteinID:
XP_017152691
UniProt:
D0QWB8
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Position
4:complement(3866162..3871349)
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AA seq
886 aa
AA seq
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MAATRKLQGEIDRCLKKVAEGVETFEDIWKKVHNATNTNQKQKHLQEKYEADLKKEIKKL
QRLRDQIKSWIASAEIKDKSALLENRRLIETQMERFKVVERETKTKAYSKEGLGAAQKMD
PAQRIKDDARNWLTSSISSLQIQIDQYESEIESLLAGKKKRLDRDKQERMDDLRAKLDRH
KFHITKLETLLRLLDNDGVEADQVNKIKDDVEYYIDSSQEPDFEENEFIYDDIIGLDEVE
LSGTATTDSNNSNETSGSPSSVTSGGSPSQSPVTVQQVLPPSVQAAANTGSSAASAALFQ
QQQAAAQSNGSNVGYASDTSAASSSATTSTDPAGSAATLSGGGGGGSGDKRNKSSESNTI
SKSKPQPQQIIKPTPVRATVKVAPGSETQVKIVSSTPSKNQQLPTAAAVVAASNSAPSSS
SGNGSGNGSGSGSSSASAGTGAAAPTASGHNPAVQPHAPTPGLTAASIAAAAAAAAVSSS
ATPAIASISNVQGQSVIQATPTIAFAAVAKHNTSLLENGPVLQQQPTATTVAAIVGAGAQ
TQQPQHQQQQPAQLSNLQTNSSHLQNGLPVSVSSSDSNSNVVDAISLKTMAQEAINRSAS
DANSLSQQPQTQQQQSNIDTRQQQSQQSLLQQHFSTENTANQPQQVASQQQQNAAAAAAA
AAAAAAAAAAAAMGTIAAAAHAAAASNGSTAGSGLMNLANAAGQPTSGSVKTHTSQQQMA
TTEAHIPTLLGVTPLGPTPLQKEHQVQFQMMEAAYYHLPQPMDTEKLQTYFHRAPVPTPA
HYPQAQLPIYDTVEFYQRLSTETLFFVFYYMEGSKAQYLAAKALKKQSWRFHTKYMMWFQ
RHEEPKIINDDYEQGTYIYFDYEKWSQRKKEGFTFEYKYLEDKELN
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgaggaaactgcaaggcgaaattgatcgatgcttaaaaaaagtagccgag
ggcgtcgaaacgtttgaagatatttggaagaaagtacacaatgctacgaacactaaccag
aagcaaaaacatctgcaggagaaatatgaggcagatctcaaaaaggaaatcaagaagctt
cagcgattacgagatcaaatcaaatcctggattgcctcggccgagatcaaggataagagc
gctctgcttgaaaatcgaaggctcattgaaacgcaaatggaacgcttcaaggtggtcgag
cgcgagacaaaaacaaaggcttattccaaggaaggcttgggcgccgcacaaaaaatggat
ccagcccagcggatcaaagacgatgcgcgaaattggttaaccagctcaattagctcactg
caaatacaaattgatcaatacgaaagcgaaattgagtctctgctggcgggtaaaaagaaa
cgattagaccgggataagcaggagcgcatggacgacctgcgggccaagttggacaggcat
aaatttcacataacaaagctggaaactctgcttcggttgctcgacaacgacggcgtcgaa
gcggatcaagtgaacaagatcaaagacgatgtcgaatattacattgattcgtcgcaagag
cctgacttcgaggagaatgagttcatctacgacgacatcattggcctggacgaggtggag
ctcagcgggacggcgacaacggacagcaacaatagcaacgaaaccagcgggtcccctagc
agtgttacctccggaggcagtccatcccaatcgcccgtcacagtacaacaagtgctgccg
ccatccgtgcaggcggcagcgaatactggtagcagcgcggccagcgctgccttgttccag
cagcaacaggcagcggcccagtcgaatggcagcaatgtgggatatgcgagcgataccagc
gcggcctcatcttcggcgacaacgtcgacggatccggcgggcagcgcggccaccttaagc
gggggcggaggcggcggcagcggcgataaacgcaacaaaagcagcgaaagcaataccatc
agcaaatcgaaaccacaacctcagcagatcatcaagcccacgcccgttcgtgcgacggtc
aaggtggctccgggtagtgaaactcaagtcaagattgtcagctcaacgcccagtaaaaac
cagcagctgcccacggctgcagcggtggtagctgcctccaactcagccccgagcagcagt
agtggcaacggtagcggcaacggcagtggcagtggaagctctagtgcgagcgcaggcacg
ggggcggccgcaccaacagccagtggtcacaatcctgccgtacagccgcatgccccaacg
cctggcctaactgccgccagcatcgctgctgcagctgccgcagcagccgtctcaagttct
gctacaccagcgattgcaagtatcagcaacgttcaaggccaatctgtgattcaagcaaca
ccaacaattgcatttgcggcggtggcaaaacacaacacatcactcctggaaaacggtcct
gtattgcaacagcagcccacagccacaacggtagccgccattgtgggagccggcgcacag
acccaacagccacaacaccagcagcaacagccggcacaattatccaatcttcaaacaaat
tcctcacacttacaaaatggtctacctgtctcggtcagtagtagtgacagcaatagcaat
gtcgttgatgcaatttcattgaaaaccatggcccaggaagccatcaatcgatccgcgagc
gatgccaattcgctaagccagcagccgcagacgcagcagcagcaaagcaacattgacacg
aggcagcagcagtcgcagcaatcactcctacaacagcattttagtacggaaaatactgcc
aaccagccgcagcaagtggcgtcccaacagcagcaaaatgcagctgcagccgcagccgca
gctgctgctgcggcagcggcagcggcagcggctgcaatgggaacaattgcggctgcagca
catgccgcggcagccagcaatggatccacagctggcagtgggctcatgaatctggcaaat
gctgcgggtcagccaaccagcggtagtgtcaagacgcatacttcccaacagcaaatggcc
acaacggaagcccacattccgacactgctgggagtaacgccgttggggccaacgccactt
cagaaagaacatcaggtgcagtttcaaatgatggaggccgcctactatcacctgccacag
cccatggatacggagaagctccaaacgtatttccatcgcgccccagtccccacgccagcg
cactatccccaggcacagctgccaatatacgatactgttgaattttatcaacgactctca
acggagacgcttttctttgtattctactacatggaaggctccaaagcccaatatctggcc
gcaaaggcactgaaaaagcaaagctggcgattccacaccaagtacatgatgtggtttcaa
cggcacgaggagcccaagattatcaacgatgattacgaacagggtacgtacatctatttt
gactatgaaaagtggagtcagcgaaagaaggagggattcacctttgaatacaagtactta
gaagacaaggagctcaattga
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