Drosophila miranda: 108162605
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Entry
108162605 CDS
T06132
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dmn
Drosophila miranda
Pathway
dmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108162605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108162605
03012 Translation factors [BR:
dmn03012
]
108162605
Enzymes [BR:
dmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108162605
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108162605
Translation factors [BR:
dmn03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108162605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
NB-ARC
ABC_tran
SRP54
TrwB_AAD_bind
TsaE
AAA_7
Rad17
PhoH
AAA_16
Motif
Other DBs
NCBI-GeneID:
108162605
NCBI-ProteinID:
XP_017152914
LinkDB
All DBs
Position
4:complement(20958791..20962442)
Genome browser
AA seq
946 aa
AA seq
DB search
MDRDRDSDSHARKGNRPPGLKGKAIGMYYRDLGRQRAKEREKMKKDGGPDMIEQPKIRLG
CSVTVPRGALERVKEFMQNFNKTPRKSDSHSDVDAQFELQFRHLLSVNFHQFIAEKKQEN
NTLNYINQNLDTKLMEEHRERLQSPNMRERLHAREQLPAMKHAKEIIRTVQENQVILIVG
STGCGKTTQVPQLLLDHSIVKSCASDCRIICTQPRRISAITIAERVSYERGENLGLSVGY
QIRLESRRPRDRASITYCTTGVLLQQLQSDPLMHSLSVLILDEIHERSVETDLLMGLLKV
ILPHRPSLKVILMSATVREQDFCDYFENCPMFRIEGVMFPVRMLYLEDVLSLTNYQFENL
RTTKKIPNQERKESLMAHEAMILPYVRRVRHMYDRRVLDQLCLPESEGCEDIDFIADLVY
YICENEPEGAILVFLPGFDKISKLNKALENPQGSFKGQRWRQSLVLYPLHSLMPSGEQQA
VFRRPPAGKRKVIMSTIIAETSVTIDDVVYVINSGRTKASNYDIASNIQSLDEVWVSKAN
TQQRKGRAGRVRPGICYNLFSRAREDQMADIPTPDILRSKLESIILSLKLLHIDNPYEFL
GTLISAPEQEAIKNGVLLLMRIGALDKEGILTPLGVHLAKLPVDPQMGKMMLMSALFCCL
DPITSAAAALSYKSPFYTPLGLESRVDQVKRQMANNMRSDHLMVHSTICSYRKSRGDRNF
CYTNYLSYMTLQQLERMKNQFAQLLCNYKFLSSPGLLDKSSNINSDKIPLLRAIIGAGLY
PNMAYMRKTHRIRNSVRAVHNMSTDDGKRVNFHPSSVNSGESSFDSDYFVYYQRQKSSSL
YLLDSTMVFPMALIIFGDGVEAGVKDRVPYLSVANTYFFKCNPETAKVVLELRTNLGRLL
LKKALCPAPIEENGEEKQLIKAIELLLSLDEKFDDDSFSSDEIEDI
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtgatcgcgattccgactcccatgcccgcaagggcaatcgtccgcccgggctg
aagggcaaggcaattggcatgtattaccgcgacctcggtcgccagcgcgcgaaggagcgc
gagaaaatgaaaaaggatggcgggccggacatgattgagcagccaaaaatccggctggga
tgcagtgtcactgtgccacgaggcgcgctggagcgcgtcaaggaattcatgcagaatttc
aacaagacgcccaggaaatccgactcgcactcggatgtggatgcgcaattcgagctgcag
ttccgtcacttgctgagcgtcaattttcaccagttcattgccgagaaaaagcaggagaac
aacactttgaactacatcaaccagaatttggacacgaaattaatggaggagcatcgagag
cgcctccagtcaccaaatatgcgcgagcgcctgcacgcacgtgagcagctgccggccatg
aagcatgccaaggagattatacgcaccgtccaggagaatcaagtcattctcattgtcggc
agcaccggctgtggcaagaccacacaggtccctcaactgctgctcgatcacagcattgtc
aagagctgtgcctcagactgccgcattatttgcacacaaccgcgtcgtatttcggccatc
acgattgccgagcgagtgagctacgagcgtggcgagaacctgggcctctcggtgggctat
cagatacgcctggagagccgccggccaagggatcgggcctccattacgtattgcacaacg
ggagtgctgttgcagcagctccagtcggatcccctgatgcacagcctcagtgtgctcatt
ctggacgagatacacgaacgcagcgtggagacggaccttctaatgggcctgctgaaggtc
atcctgccgcacagacccagcctgaaggtgattctgatgagtgccaccgttcgagagcag
gatttctgtgactactttgagaattgtcccatgttccgcattgagggggtgatgtttccc
gtccggatgctctacctggaggatgtcctctccctcaccaactatcagttcgaaaatttg
cgcacaacgaaaaaaataccgaatcaggagcgtaaggagtccttgatggcgcacgaagcc
atgatcctgccgtatgtgcgtcgcgtccgtcacatgtacgatcgaagggttctcgaccaa
ttgtgcctgcccgagtcggagggctgcgaggacattgatttcattgcggatctggtctac
tacatctgcgagaacgagccagagggtgccattctggtcttcctgcccggcttcgacaag
atctccaaactgaacaaagctctggagaacccccagggttcgttcaagggccaacgctgg
cgccaaagtctagtcctttatcccctgcactccctgatgccctccggcgagcagcaggcg
gtgttccgtcgtcctccggccggcaagcgtaaggttattatgtccaccattatagccgag
acatcggtgaccattgatgatgtggtgtatgtcatcaattccggccgcaccaaggctagc
aactatgacattgccagcaacatccagagcctggacgaagtgtgggtgagcaaggcaaat
acccagcagcgcaagggtcgtgcaggacgtgtaaggccgggcatctgctacaatctgttc
agtcgggccagggaggatcagatggccgatatacctacaccggatatactgcgctccaag
ctggagtcaatcattttgagcctgaaactgctgcacattgataatccctatgaatttttg
ggcactctcatcagtgcccccgaacaggaggccatcaaaaacggtgttcttctcctgatg
cgcattggtgctctggacaaagagggcattcttacaccgctgggcgtgcatttggcgaag
cttcccgtcgatccgcaaatgggcaaaatgatgctcatgtcagccctattctgttgcctg
gatcccatcacctcggcggcagcggcactctcctacaagtcgccgttctacacgcccttg
gggctggagagccgtgtggatcaggtgaaacggcagatggccaacaacatgcgcagcgat
catctgatggtgcacagcaccatttgttcgtatcgcaagagtcgtggtgatcgcaacttc
tgctatacgaattatttgagctacatgacgctgcagcagctggagcgcatgaagaatcag
tttgcacaactgctgtgcaactacaaatttcttagttcacccggcttactggacaagtca
tccaacattaattcggacaagattcctctgctgagggctattattggagccggtctctat
ccgaatatggcatacatgcgcaagacacatcgcatacggaattcagtgcgtgctgttcat
aacatgtccacggacgacggcaagcgtgtgaattttcatccttcgtccgtgaacagcggg
gaatccagctttgactcggattattttgtgtattaccagcgacagaagtcctcatcgctg
tatttactcgattccacaatggtctttcccatggctctcattatttttggcgatggcgtc
gaggcgggtgtcaaagacagagtgccctacctatccgtggccaatacatacttttttaaa
tgcaatccagagactgccaaagtggtgcttgagctgcgcacaaatctgggtagattgctg
ctgaaaaaggctctctgtccggcccccatcgaagagaatggcgaagagaagcaattgatc
aaagcaatcgagttgctgctttcattggacgagaaattcgatgacgattcgttttcgtcc
gacgaaatcgaagatatctga
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