KEGG   Drosophila miranda: 108162692
Entry
108162692         CDS       T06132                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
dmn  Drosophila miranda
Pathway
dmn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dmn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108162692
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dmn03041]
    108162692
Spliceosome [BR:dmn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    108162692
 Complex C
   U5 SnRNP specific factors
    108162692
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C ANAPC4_WD40 WD40_RFWD3 Beta-prop_SPT8 NBCH_WD40 WD40_MABP1-WDR62_1st eIF2A WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_HPS5 WD_LRWD1 Cytochrom_D1 Phage_min_tail
Other DBs
NCBI-GeneID: 108162692
NCBI-ProteinID: XP_017153031
LinkDB
Position
4:26962171..26963480
AA seq 347 aa
MGTKRPHNSVVPAQETKRSKNDIIAYTNRDKALLESGVRRTSNLQAPIMQLEGHEGEIFT
TEFHPEGELLLSSGFDRQLYIWQVYDDCENVMAMSGHTGAVMEAHFTPDGSHIFTCSTDK
TLAIWDIVTGQRLRRFKGHTSFVNSVQGTRRGQQLLCSGSDDRGIRIWDARKKHAVQTLE
SPYQVTSVCFGDTGEQVITGGIDNELKIWDIRKQEVLHHLRGHTDTITGMSLSPEGDFIL
TNSMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWAPGSDKVSAGSADRQVYI
WDVNTRRILYKLPGHNGSVNDVDFSPKEPLILSASSDKTLYLGEIEE
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgggcactaaacgaccccacaacagtgtggtaccagcccaggagacaaagcgcagtaaa
aatgatataatagcatatacaaatcgggataaagcgctcttggaatcgggtgtaagaaga
acatccaatctgcaggcacccataatgcaattggagggacatgagggagagatttttacg
acagaattccatccggaaggagaacttttgttgtcctctggcttcgatcgccagctttat
atttggcaagtctatgatgactgtgagaatgtaatggccatgtccggacacactggagcc
gtgatggaagcccattttacccccgatggctcccacatcttcacctgctccacagacaaa
acgctggccatttgggatatagtcacgggccaaagattgcgtcgattcaagggccacacg
agctttgtgaacagtgtccagggcacaaggcggggacaacagctgctgtgctccggcagc
gatgatcggggcatcaggatttgggatgccaggaaaaagcacgccgtgcagaccctggag
tcgccataccaggtgacatccgtgtgctttggcgacactggagagcaggtcatcaccggc
ggcatcgataatgagctgaagatctgggatatacgcaagcaggaggtgctgcaccatctg
cgcggacacacggacaccatcacggggatgtccctctcgccagaaggtgactttatcctc
accaactccatggataacaccttgagggtgtgggatgtgcggccctatgccccgggcgaa
cggtgtgtgaaggtctttcagggacatcagcacaatttcgagaagaatctgttgcgatgt
gcttgggccccaggcagcgataaggtctccgctggttccgctgatcggcaggtctatatt
tgggatgtgaacacaaggaggatactgtacaagctccctggacataatggcagtgtaaac
gatgtcgatttcagccccaaagagccgctgatactctccgcctccagcgataagactttg
tatctgggagagattgaggaatga

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