Drosophila miranda: 108162827
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Entry
108162827 CDS
T06132
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmn03021
]
108162827
03036 Chromosome and associated proteins [BR:
dmn03036
]
108162827
Transcription machinery [BR:
dmn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
108162827
Chromosome and associated proteins [BR:
dmn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
108162827
SLIK complex
108162827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
SLIDE
PaRep2b
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
108162827
NCBI-ProteinID:
XP_017153244
LinkDB
All DBs
Position
4:12359566..12368103
Genome browser
AA seq
1960 aa
AA seq
DB search
MDLVCFSQQGGLNQCQSGRLALNESANSIGSDEQDDTRDEANGTDNSGSGSGSGSSGSDS
DSDSSSGNSSDGRSSPEPNVKPSSTSVAGFPPTAAAAQADSKTNGFTDDQEESSSGGSSG
SDSDSESEETRAGADHTATGGKLSANTSTSTTNSSSSSSKQQQDEEEDEDDDDDDDKETE
TVQQQKEQEPAADSEASADDDASDSSPNASPTSSSSSSEDEEEDYRPKRTRQARKPPTAA
PDKSKRAPPHKKKKKTWDSDESDESDESDEESSAPKRKPAPATTSRNKPVPQQQQRRRVK
SFSSDDSDDDDASKRCATRRTGAAVSYKEASEDEATDSEDLLECEYDEIQAAASAAAAVE
DEKCETIERILAQRMGRRGCTGNKTTIYAIEDPHAKVEEVEKVAEAEEDVPKEEEEQYLI
KWKGWSYIHNTWESERTLRDMKAKGMKKLDNFIKKEQETAYWRRYAGPEDIDYFECQQEL
QHELLKSYNNVDRIIAKGSKPDVGTDEFLCKWQSLPYAEATWEDATLVLRKWQRCAEQFH
DRESSKCTPSRHCRVLKYRPKFSRIKNQPDYLVAGLVLRDYQMDGLNWLLHSWCKENSVI
LADEMGLGKTIQTICFLYSLFKVQHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLG
DIKSREMIQQYEWQFEGSKRLKFNCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDD
SLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIMPEKFDTWDNFELQHGNAEDKGY
TRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKKG
STSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKE
TGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLL
STRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQI
VERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFKDE
PEHDEHELVCDIDEILRRAETRNDDPEMPGDDLLSAFKVASIAAFEEEPSESNKQDVDAG
DDAEDDSKDWDDIIPEGFRKVIEDQEKAKEIEDLYLPPRRKTAAANQSESKRGAGGKGGR
SKQADDSGDSEYELGSDASGDEGRPRKRGRPTMKEKITGFTDAELRRFIRSYKKFPAPLH
RLEAIACDAELQEKPLTELKRLGEMLHDRCVQFLDEHKEEEIKTVQDDTPGAKQRRARAT
YSVKLGGVSFNAKKLLTSEQELQPLNEIIPSGAAERQQWTFNIKTRVPVFDVEWGNEEDT
KLLCGIYQYGIGSWEQMKLDPTLKLTDKILLNDTRKPQAKQLQTRAEYLLKIIKKNVELT
KKGGQKRQRRPRAARINAESKAGNNSNNHSATSGAMAESKALGEAEETVDGGRGALDNSS
SHLDPSSTASPHLTPASEVSGGGTAQRTKKSKARSKKTSASDNNGNKPMHFTANNEPRAL
EVLGDLDPSIFNECKEKMRPVKKALKALDQPDLSLSDQDQLQHTRDCLLQIGRQIDVCLQ
PYGESEKKEWRSNLWYFVSKFTELDAKHLFKIYKHALKQQLSRESGGKGKSRAGSKEDSV
SPSKIRRNGLPAEKDKDRERDKSGKKKRKDKDKERVGQSRYSDGGTPTSGRFVNDSPLKR
KRDENDVDGGSSAGGIVAIVGGGISDHLKSMSFKRLNMERHEERKKHHRSSEYYGSSGAA
PAGSCYEGSSSARRAGLNSPSTPNSRSARSGGGYEALPAPSGYTPEMERWHARERYSLEY
KRDRYEVGYPRSGGPPGGYHRDHRERDRDRRPDKRRYPPHLPPHAYPSHYLPTNYYMPNG
IVPALPHPPGYRSDPRGYPMMPRDYPADYRRSDYERRTQT
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtatgtttttctcagcaaggcgggttaaatcagtgtcaatccggtcgccta
gcactcaatgaatcggcgaatagtattggctcagacgaacaagatgacacacgtgatgag
gcaaacggcacggataacagtggcagtggcagcggcagtggctcctccggatccgactct
gattcggatagttcgtcgggaaattccagcgatggacgaagctctccggagccgaatgtc
aaaccatcaagcacatcggtggcgggttttccaccaacagcagcagctgcacaggcggac
agtaaaacgaatggcttcacagatgatcaggaggagagttccagtggcggatcaagtggc
agcgactccgattcggagtcggaggaaaccagagcaggagcagaccatacagcaacaggc
ggcaagctcagcgcgaacacgagcacgagcaccaccaacagcagcagcagttcatcaaag
cagcagcaggacgaggaggaagacgaagatgacgacgacgatgacgacaaagagactgaa
actgtacagcaacagaaggagcaagagccggcggctgacagtgaagcctccgccgatgat
gatgccagtgatagttctccaaatgcatcacccacatcctcaagcagcagcagcgaggat
gaggaggaggactatagacccaaacgaacgcgccaggcgcgcaagcccccaaccgccgca
cccgataaatcgaagcgagcgccgccacacaagaagaaaaagaaaacctgggactcggac
gaaagcgatgagagcgacgagagcgatgaagagtcatccgcccctaagcgcaagccggcg
ccagccactacctctaggaataaaccagtgccacagcagcaacagcgacgtcgggtgaag
tcctttagctccgatgacagcgacgatgatgatgccagcaagcgctgcgccacgcgtagg
acaggagccgcggtaagctacaaggaggcatctgaagatgaggccacggactcggaggat
ctgctggagtgcgaatacgacgagatccaggcggcggcatcggcggccgctgccgtggag
gacgagaaatgtgagaccatcgagcggatcctggcacagcggatgggcagaaggggctgt
acgggcaataagaccacgatatatgccatcgaagatccccatgcgaaagtggaagaggtg
gaaaaggtggcagaggcggaggaagatgtaccaaaagaggaggaggagcaatatctgatc
aagtggaagggctggtcgtatatccacaacacatgggagtcagagcgtacgctgcgcgac
atgaaggccaagggcatgaagaagttggacaacttcatcaagaaggaacaggagactgcc
tactggcgccgctatgcgggccccgaagacatcgactactttgagtgccagcaggagctg
cagcacgagctgctcaagtcttacaacaacgtggacaggatcattgcgaagggatccaag
ccagatgtcggtaccgatgagttcctatgcaaatggcaatcgttgccctatgccgaggct
acctgggaggatgccacactggtgctgcgcaagtggcagcgctgtgccgagcagttccat
gacagggagtcctccaagtgcacaccctcgcgtcactgccgtgtcctcaagtatcgcccc
aaattctcgcgcatcaagaatcagcccgactacctggtggcgggtttggtgctcagggac
tatcagatggacggcctcaactggctgctgcactcgtggtgcaaagagaactccgtcatt
ctggccgacgagatgggcctgggcaagacaatacagacgatatgcttcctctactccctg
tttaaggtgcaacacctgtacgggcccttcctctgtgtggtaccgctcagcacgatgact
gcctggcagcgggagttcgacctgtgggcgccggacatgaacgtggtcacctatctgggg
gacatcaagtcgcgcgagatgatccagcagtacgaatggcaattcgagggctccaaaaga
ctgaaattcaactgcatactgaccacatatgagattgtccttaaggacaagcagtttctg
ggcaccctgcagtgggcagcgttgctggtggatgaggcgcatcgcctcaagaacgacgac
tcgctgctgtataagtcgctcaaagaattcgacacaaatcatcgactgctgatcacgggc
acgcccctgcagaactccctgaaggagctgtgggccctgctgcacttcataatgcccgag
aagttcgacacgtgggacaactttgagctgcagcacggcaatgccgaggacaagggctac
acccgactgcaccagcagctggagccgtatatcctgaggcgggtgaagaaggatgtggaa
aagtcgctgccagccaaagtggaacagattctgagggtcgagatgacctcgttgcagaag
caatactacaaatggattctgaccaagaactttgatgcgttgcggaagggcaagaagggc
tccacctccaccttcctgaacatagtcattgagctgaagaagtgctgcaatcacgcggcc
ttgatcaggccctcggaatttgagctgatgggcctgcagcaggacgaggctctgcagacg
ctgctcaagggctcgggcaagctggttttgttggacaagctgctctgccgactgaaggag
acgggccatcgggtgctcatattctcgcaaatggtccgaatgctggacgtcctggccgac
tacctccagaagcgacactttccctttcagcgcctcgatggcagcatcaagggggagatg
cgtcgccaggcgctcgaccatttcaatgccgagggcagccaagacttttgctttctgcta
tccaccagggccggtggcctgggcatcaatctggccacagccgacacagtcattattttc
gactcggactggaatccccaaaacgatctgcaagcccaggcccgagcccatcgcattggc
caaaagaatcaagtgaatatatatcgcctggtcacggccagatccgtagaggagcagatt
gtggagagggccaagcagaagatggtcttggaccacctagtcatccagcggatggacacc
acgggtcgcacggtgctggataaaagtggcaacggccactcctcgaactccaatccgttc
aacaaggatgatctctccgccatactgaagtttggcgccgaggagctgttcaaggacgag
ccggagcacgacgaacatgaactggtctgcgacattgatgagatcctgcggcgggcagag
acccggaacgatgatccggagatgccgggcgatgatcttctgtccgccttcaaggtggcc
agcatagcggccttcgaggaggagccgagcgaatcgaacaaacaagatgtggacgccggc
gacgatgcggaggacgacagcaaggactgggatgacattattcccgagggctttcgcaag
gtcatcgaggatcaggagaaggccaaagaaattgaggatctctatctaccgcccagaaga
aagacggcggcggccaatcaaagcgagtccaagcgtggagccggcggcaagggcgggcgg
tccaagcaggcggacgactctggcgactccgagtacgagctgggctccgacgccagtggg
gatgagggtcgtccccgcaagcgtggacgtcccacaatgaaggagaaaatcactggcttc
accgatgctgagctgcgtcgtttcattcgcagctacaagaagtttcccgcccccctacac
cgcctggaggccattgcgtgcgatgcagagctgcaggagaagcccctgacagagctgaag
agactcggcgaaatgctgcacgaccggtgcgtccagttcctagacgagcataaggaggaa
gaaattaagactgtgcaggacgacacgccgggggcaaagcagcggcgcgcacgggccacc
tactctgtgaagctcgggggcgtctccttcaatgccaaaaaactgctgacatctgagcaa
gagctgcagccccttaacgagatcatacccagtggggcggcggagaggcagcagtggaca
ttcaacatcaagacgcgggtgccagttttcgatgtggaatggggcaacgaggaggacacc
aaactgctgtgcggcatttatcagtatgggatcgggtcgtgggagcaaatgaagctggat
cccaccctgaaacttaccgacaagatcctgctgaacgacacccgcaagccgcaggccaag
caacttcagacccgagccgagtacttgctcaagatcatcaagaagaatgtggagctgacg
aagaagggcggtcagaagcgccaacgacggcccagagctgcacgaatcaacgcagagtca
aaggccggcaacaactccaacaaccatagcgccacatctggcgctatggccgagagcaag
gcgctgggcgaggccgaggaaactgttgacgggggtcggggggcactggataatagttcc
agccacttggatccctcctccacagcttcgccgcacctgactccagcctctgaagtgagc
ggcggcggcactgcccaaaggactaaaaagtcaaaggccaggtcgaagaagaccagcgcc
tcggacaataatggcaacaagcccatgcactttacggccaataacgagccgcgggccttg
gaggtcctgggcgatttagatcccagcattttcaacgaatgcaaggagaagatgcgtcca
gtcaagaaggccttaaaagccctggatcaacccgatttgagtctgtccgatcaggatcag
ctgcaacacacgagggactgcctgctacagatcggaaggcagattgatgtgtgtctgcag
ccgtatggcgagtcggagaagaaggagtggcgcagcaatctatggtactttgtgtccaag
ttcacggagctggatgccaagcatctgttcaaaatctacaagcatgccctcaagcaacag
ctcagtcgggagtcgggtggcaagggaaagagcagagctggctccaaggaggattcggtc
agtcccagcaagatccgacgcaatggtcttccagcggaaaaggacaaagacagggagcgg
gacaagagcggcaagaagaagcggaaagacaaggacaaggaacgtgtgggccagtcgcgt
tactcggatggcggtaccccgacttcgggtcgctttgtcaacgactcaccactcaaaagg
aagcgggatgagaacgatgtggacggcggtagcagtgcgggcggcatcgtggccattgtt
ggcggcggcatcagcgaccatctcaagtcaatgtccttcaagcgtctaaacatggagcgt
cacgaggagcgtaagaagcatcaccgcagcagcgaatactatggcagcagtggagctgct
ccggcgggcagctgctacgaaggcagcagcagtgctcgcagagcgggcctgaactcccca
tccacgccgaacagtcgcagtgctcgtagtggaggtggttacgaggcactgcctgctccg
tcgggctatacgccggaaatggagcgttggcacgccagagaacggtatagcttggagtat
aagcgcgatcgctatgaggtcggttatcctcgcagcggcggacctcccgggggctaccat
cgggatcaccgcgaacgtgatcgcgaccgtcggcccgataagcgaagatatcctcctcac
ctgccgccgcacgcctacccgagtcactatctgccgaccaattattatatgccgaatggg
atcgtgcccgctttacctcacccgccaggataccgcagcgatccgcgtgggtatcccatg
atgccacgcgactatccagccgattatcgacgcagcgactacgagcgacgtacgcagacg
tga
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