Drosophila miranda: 108162988
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Entry
108162988 CDS
T06132
Name
(RefSeq) nuclear pore complex protein Nup154
KO
K14312
nuclear pore complex protein Nup155
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108162988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108162988
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108162988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
108162988
NCBI-ProteinID:
XP_017153485
LinkDB
All DBs
Position
4:18834016..18839629
Genome browser
AA seq
1368 aa
AA seq
DB search
MSATPAQFEFLSTAGNMLEWHDNLDRQKPGLLELTGVSQHGRPTMSGLNDYDYQSLAYLK
SDNAHNLKQLRTVTKSAIPNEILEHFKHVKCHCNMGLFPEIGRAWLTIDSEIYIWTYNQT
RDVAYYDGLSHLIVSVGLVKPKPDVFVKDVMYLLVLTTPIEVIVLGVTFGENSYNEMQLM
NRPIFVIGTDNVSISAIKGTDDGRIFLGGRDGCLYEVFYQAETSWFGKRCKKINLSQNLV
SYMVPSFLKVFSEVDFIQTIAIDNSRRLLYILTENGSIEAWDIGSNYANVRRLSKITQSD
ITNKAVSLITTVDPSIFKAVRAICPLIEDDSNKLHLVAVTQCGVRLYFSTTSLNTQQSFN
ATTPCPQTEYFGSGQTPLSAGMDAPKGLYLLHVRLPPGYTPNATTNKPREVYAAHYSEET
MLMITTQQQDQDLLWSVSSVPSVNHTYLVESAALESLDGIVWGLAEVHDPSRPLLNSPLY
KARNPRRVALLTNQGTHIVELLKSPDILLQILLACNGPHHEEVKMFFQSQNKREACATCL
LIATSEKYRGGDIALWATQAFMLYGGEPCFQNQKFLNANNRNLPNQTLSSNSALGTERLP
MFMSTPMQNKSTLPSTQYAAFQYNQHTSQAGILQSSQALGHENAAIVFSSKHDGLYLYVA
RMLRSIWKLNCVDENFCTKLGPGDCASLLSDLRSLRSFLEVHSVHDISSSTRVPFDSQLD
KTTGYTTMLMANSHLPMSDQRSMSEQAQVEEKRSLSALNLFVKHACEVISLWSILNSHSF
QHLCLQLSPEHQKVLRCCTFRDLMLTRSEVCAFLIISLINLYLKDKTGVSEVSKNLRELC
PNLYRHEDAVTYKATELLMSAKNCTSPVEKKQKLRTTLQMCKEAAPTLPLHSICQLFISV
DFFEGVVELTAICASKSDPEDVGIHFYNNDEPPEDREGYSYFVTRMNYYKEVQLMLDHVY
QATCNNTSIQDQTLPYYLCNTPGSNVDPGESCNAEYKSKPSISKIAAQTLQIKDPLIHVT
LYEWLLAHDMLTELLEVVEPTLGEFLRRSVTRNPDNVILTDLLWKYYEKNGYHSQAAQIL
DNLAMTRSENITLEQRLEYVVRAVMCMRNGNVGSSVTSGIFLKELEDKLEIARVQKAVLV
DMTALAQKNPDATTAVKELNYALYEITPLYQRFAEPFNLWECQLAILNCSHHNDPLLIES
VWGNIISSLVEDPGSTQERTNRLFSKIELLVREYSESGACFPFAFLIRELEIKACQLRMP
EGTVPEKLVTMNLDLELILEYYSRMISMNERVWANEGNEWHLIQSAIRVVSLLADNAHAI
WYRSKRRIIGKAQDIVAACLNICYQKPDTNRLQQSLKELQCRLQRLLG
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctacgcccgcgcagtttgaatttttatcaacagcaggaaatatgctggagtgg
cacgataatctcgacagacaaaagcctggtctattggaattaacaggtgttagccagcat
ggtagacccacgatgagtggcctaaatgattacgactaccagagccttgcatacttaaaa
tcagataatgcacataacctaaaacaactgcgaactgtcacaaaatctgcaataccaaat
gaaattctggaacactttaagcatgtaaaatgtcattgtaacatgggtttgtttcctgaa
attggtcgcgcctggctaaccattgattctgagatttacatatggacatataatcaaaca
cgagatgttgcatactatgatgggttaagccatttgattgtgagcgttggattggtaaaa
ccgaagcctgacgtctttgtgaaagatgttatgtatcttttagttttgacgacacctata
gaggtaattgtcttgggcgtcacatttggagagaattcgtacaatgaaatgcaactaatg
aacaggccaatatttgtgattggaactgacaatgtatcaatcagcgccataaaaggaaca
gacgacggacgcatttttttaggtggtcgtgatggctgcttatatgaggtgttctatcag
gctgaaactagctggtttggaaaacgttgcaagaagataaacctctcccaaaatctcgtt
tcgtacatggtcccgagttttctcaaagtattttcggaagttgatttcatccagacaatt
gccatcgacaatagccgcagactgctatatattctaacggaaaatggatctattgaggct
tgggatatcggatcgaattatgcaaatgtgcgaagactgtctaagatcacccaaagtgat
attactaacaaggcagtcagcttgattacgactgttgacccatctatttttaaagctgtt
agggcaatatgtccccttatcgaagatgattcaaacaagctgcaccttgtcgctgttacg
cagtgcggcgtacgtctgtatttctccaccacatcgctgaatacgcaacagtcttttaac
gcaacaacaccttgcccgcaaaccgaatatttcggcagtggtcagacaccactgtcagcg
ggaatggacgcgccgaagggactttacttactccatgttcgacttcccccggggtacaca
cctaacgcaacaaccaataaacctagggaggtatatgcagcacactactcggaggaaaca
atgttaatgattacgacgcaacagcaagatcaggacctattgtggtcggttagctctgtt
ccgtcagttaatcacacgtatctcgtggaatcagcagctctggaaagcttggatggcatt
gtttggggcttagctgaggtacacgatccttctaggcctcttcttaattcccctttatac
aaggcacgcaacccgcgccgagtcgctttgctaacaaaccaaggcactcatattgtagag
ttgctaaaatcgccagacatactgctgcagatcttgttggcgtgcaatggtccgcatcat
gaggaagtaaaaatgtttttccaatcgcaaaataaacgcgaggcctgtgctacgtgttta
ctgatagctacttctgaaaaatatcgtggtggcgatatagcgttgtgggccacccaggct
tttatgctgtacggcggagaaccatgctttcaaaatcaaaagtttttgaatgctaataac
cgtaacttacccaatcaaacattgtcttcgaattcagccctagggacagagcggttgcct
atgttcatgtcgacaccaatgcaaaataaatcaactctcccctctacgcaatatgctgca
tttcagtacaatcagcatacaagtcaagctggaattttgcagtcatcccaggcacttggt
cacgaaaatgcagcgatagttttttcgtcaaaacatgacggactatacctatatgtcgcg
cggatgttgcgatctatttggaaactgaattgtgtcgatgaaaatttctgtaccaaatta
ggtccaggcgattgtgcatccctattgtccgacctacgttcattgcgtagttttctggaa
gtgcattctgtgcatgatatttcctcctctacccgagtgcctttcgacagtcaattggac
aaaacgactggatacacaacaatgttgatggccaacagccatttgcccatgtcggatcaa
aggagcatgtcggagcaggctcaggttgaggaaaaacggtcgctttcagctttgaacctt
tttgtcaagcatgcctgtgaggtcatatccctgtggagcattctgaattcgcattcattt
caacacctttgtctgcagcttagtcccgagcaccagaaggttctgaggtgttgcaccttt
cgcgacttgatgcttacacgatccgaagtgtgcgcatttttaataatttcactgatcaat
ctatacctcaaggataaaaccggtgtatcggaagtatcaaagaatttacgtgagctatgc
ccgaatctgtataggcatgaggatgctgttacatacaaggccacagagcttctaatgagt
gctaaaaactgcacctcacctgtggagaagaaacaaaagttgagaacaacgttgcaaatg
tgcaaggaagcggcacccacattgccgctgcatagcatttgtcaactttttatttccgtc
gactttttcgagggtgtagtcgaactgacagccatttgtgcatcaaagagcgatcctgaa
gatgttggaattcacttctataacaacgacgagccgcctgaagaccgtgaaggttattcc
tattttgtcacccggatgaactattacaaggaggtgcaacttatgctagatcacgtctac
caggctacctgtaataatacatctattcaagatcaaacattaccgtattatctctgcaac
actcccggatctaatgtagaccctggggaaagctgtaatgctgaatacaaatcgaagcca
tcaatttcaaaaattgctgcccagactctccaaataaaagaccctttaattcatgtgacg
ctctacgaatggttgctcgctcatgacatgctaactgaacttttggaagtggtagagcca
actttgggagagtttttgcgccgaagtgtaacacgtaatccggataatgtcattttaacc
gatttgctttggaagtattatgagaagaatggataccattcccaggcagcacaaattttg
gataatttggcaatgacacgcagtgaaaacataactctggaacaacgccttgagtatgtg
gtgagggccgttatgtgtatgcgcaatgggaacgttggctcctctgtaaccagtgggata
ttcttaaaggaactagaagacaagctggaaatagctcgagttcaaaaagcggtgcttgtt
gatatgacggcgttggcacaaaaaaatccagacgccacaacggccgtaaaagaattaaat
tacgcactatacgaaatcacaccattgtaccagcgttttgctgagccctttaatctttgg
gagtgccaattggcgatacttaattgctcccatcacaacgatcccttgctgatagagtcg
gtgtggggtaacataatcagcagcttagtagaagacccaggatctactcaggaacgcacc
aacaggttgttcagcaaaattgaactattagtgcgtgaatattctgaatcgggtgcttgc
ttcccattcgcttttttgataagggagctggaaattaaagcttgtcagctgcgtatgccc
gaaggaacggtcccagaaaaactggtaaccatgaaccttgacctggagctaattcttgaa
tactactcaagaatgatttcaatgaatgaacgtgtctgggcaaatgaaggcaacgagtgg
cacttaatccaatccgcaattcgtgtggtatctcttcttgcggacaacgcccatgctatt
tggtaccgctcaaagagacgaattattggaaaggctcaggacatagtggctgcctgtttg
aatatatgttatcagaagccagacacaaatcgattacagcagagtcttaaagagctacaa
tgcagattgcaacggctgttgggttag
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