Drosophila miranda: 108163055
Help
Entry
108163055 CDS
T06132
Name
(RefSeq) zinc finger protein swm
KO
K13192
RNA-binding protein 26
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dmn01009
]
108163055
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108163055
03041 Spliceosome [BR:
dmn03041
]
108163055
Protein phosphatases and associated proteins [BR:
dmn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108163055
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
108163055
Spliceosome [BR:
dmn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108163055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_Nup35
PWI
zf-CCCH
RRM_1
zf_CCCH_4
RRM_PARP14_3
GatC
Motif
Other DBs
NCBI-GeneID:
108163055
NCBI-ProteinID:
XP_017153616
LinkDB
All DBs
Position
4:complement(14181490..14186408)
Genome browser
AA seq
1075 aa
AA seq
DB search
MILENSDKLKDWLSVVLEPLCDADSSALARYVIALLKKDKSDKELKRIMIEQLDVFLSEE
TTRFVERLFDAIATEEYLTLPAPLPVASGAVELDVDLDLALAMDGSTDIEAMLAAPSPPP
APSNDIVIKLESNQPQLDQQQPQPSTDTQEAEALATAAAYVSQEASIASIPTTDANSTTH
PEPAFDQKTKDSQNPQQQSASHYHHVRSASPPGRSSGGNGALGLGGLAGSSAGYADKENQ
PREGRRRRASLRSRSRSRSRSNERALRRSRSRDRRVNEREKGQRQFRNKSPPGAADNRHH
GRRNFDRRRIGGNTDERQRFGNNKSRRSHSRSVSPERNARRNQSSPERGQALPANQPTVA
VPVPMPVEHPAAHPRQRCRDFDEKGYCVRGETCPWDHGINPVVFEGINNSALMMSMREYN
PDAPEIWAHGGVPPPTAGQGPAGPGGPNQPGQTSINPFSGNVRPNPLMGGSGPNPMGVPN
PADYARNPAAPPQPAMMPFSFNPTAVTTPLQRQLIPIPVVDGDPSGGVAEIGKRRFELED
TVAIADVPTKRKVPINSRLGPRVNPNMQQHNSSLELRKVPRGLNTIAHLNNHFAKFGKIV
NIQVSYEGDPEAAIVTFSTHAEANVAYRSTEAVLNNRFIKVFWHNESTGAEGGQMNPIGG
GAMGAGGGGGRKNASQYHLHNVPAVPTPNADSAKISNATPLAEAGAGNNATPTAEQASTA
APASMRLKLNTSAGAGGVGGAGAAAGGAAAARPLNPSANAASIRKKQEEQQKAVHQLANG
LRKRKQELLQSYVKQMKTALELVERLDNQDPQRANTLETIKVLQETIDKLRKDVHADQDQ
LQAQIQQQQQPPVKKTKEQQKKELLDMELELFAQQQEGNDTTAIQKRLEELQRTLGGSQA
PNNTKAPHFAATPGAAGGGRKRANFPEGSTRVDRRTKAIVVTGFAAEEADFVLGHFKNFG
EICKHDVDREIPQLILSYATRINAEQAVHRGKMYQDKLLQITWAPVVTPTPALMAAPAEK
SAVPAPVAVAPLENPKQLIQSISESESLLGSDTLPELRLEDEEEDEESEDRSWRR
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgatattagaaaattcggataagctcaaggactggctgagcgtagtgctggagccactc
tgcgatgcggactcgtctgctttggcgcgctatgtcatcgcgctgctcaaaaaagacaaa
tcggataaggaactcaaacgcatcatgatagagcagctggatgtctttctgtccgaggag
acgacgcgcttcgtggagcgtctgttcgatgccattgccaccgaggaatacttgacgctg
cccgctcccctgcctgtggcaagtggagctgttgagctcgacgtcgatctggacttggcg
ctggccatggatgggtccaccgacattgaggctatgttagccgctccctcaccgcctccg
gcgccgtcaaacgacattgtgataaagctcgaaagcaatcagccgcagctcgaccagcag
cagccccagccgagcaccgatacccaggaagcagaagccctggccaccgccgccgcctac
gtcagtcaagaagccagtattgcctccatccccacaacagatgccaattcgacaacacac
cccgagccagccttcgatcaaaaaaccaaagactcgcagaacccacaacagcagtctgcg
tcgcattatcatcatgtgcgcagtgccagtcctccagggcggagcagcgggggaaacggt
gccttggggctgggaggattggcgggaagcagcgctggatatgccgacaaggagaaccag
ccacgggaaggtcgccggcggcgagcgtcccttcgttcgcgctcacggtcccgctcacgc
tccaacgagcgtgccctccggcgctccagatctagggatcgtcgtgtgaatgagcgcgag
aaaggccagcgccagttccgcaacaaatccccgccgggcgcggctgacaaccgtcaccat
gggcgtcgcaatttcgatcgtcgccgcatcggcggcaacacggatgagcgccagcgattc
ggcaacaacaagagccgacgctcgcacagtcgctccgtgtcgcccgagcgcaatgcgcgc
cgcaaccagagctcccctgagcggggacaagccctgccagccaaccagccgacggtcgcg
gttccagtccccatgccagtggagcatccggcggcacacccgcgccagcggtgtcgggac
tttgacgagaagggatactgcgtgcgcggcgagacctgtccctgggatcacggcatcaat
ccggttgtctttgagggtatcaacaactccgccctgatgatgtccatgcgggagtacaat
ccagacgcgccggaaatctgggcacatggcggagtgccccctccgactgctggccagggc
ccagcgggaccgggaggacctaaccaacccggccagaccagcatcaatcctttctccgga
aatgtgcgtccgaaccccctgatgggcggctctggacccaatccaatgggcgtgcccaat
cccgcggactatgcgcgcaaccctgccgctcccccgcagccagccatgatgccattctcc
ttcaatcccacggccgtgaccacaccgctacagcggcagctgattcccatacctgtggtg
gatggcgacccctctggtggagtggccgaaatcggcaagcggcgcttcgagctggaggac
accgtggccatagccgatgtgcccacaaagcgcaaggtcccgatcaacagtcgcctgggt
ccgcgggtcaatccgaacatgcagcagcacaacagctcgcttgagctgcggaaagtgccg
cgaggactcaacaccatagcgcatttgaacaatcactttgccaagttcggaaagatcgtc
aacatccaggtgtcgtacgagggtgacccagaggctgccatcgtgaccttctcgacgcac
gccgaggcgaatgtggcctacaggagtacggaggctgtgctcaacaaccggttcatcaag
gtcttctggcacaacgagagcacgggagcggagggcggacagatgaatcccataggcggc
ggtgccatgggtgccggcggcggcggcgggaggaagaacgccagtcagtaccacttacat
aatgtccccgctgtgcccactcccaatgcggacagtgcgaagatcagcaatgccacgcct
ctggctgaggcgggggcgggcaacaatgccacgccgacggcagagcaggccagcactgca
gcgcccgcctcgatgcgactcaagctgaacaccagcgcgggagcaggcggcgtcggcgga
gctggggcagcagcaggaggggcggcagcagctcgtccgctaaatccgtcggccaatgcg
gccagcattcgaaagaagcaagaggaacagcagaaggccgtgcaccagctggccaatggg
cttcgcaagcgcaagcaggagctgctccagagctacgtgaaacaaatgaagaccgcactg
gagctggtcgagcggctggataaccaggatccccagcgggcgaacacactggagacaatt
aaagtcctgcaggagaccatcgacaagctgcgcaaggatgtccatgccgatcaggaccag
ctgcaggcccagatccagcagcaacaacagccgcccgtcaagaagaccaaagagcaacag
aagaaggagctgctcgacatggagctggagctcttcgcacagcagcaggagggcaacgat
acaacggccatacagaagcgtctcgaggagctccagcgcacactgggagggagccaggcc
ccaaacaacacgaaggccccccactttgcagccacaccgggggcagccggtggtggccgc
aagcgggccaacttcccggagggctcgacgcgtgttgacagaagaacaaaggctattgtt
gtcacgggctttgcggccgaggaggcagactttgtcctggggcacttcaagaactttggt
gagatttgcaagcatgatgtagatcgtgagattccacagctaatactctcctatgcgacc
cgcatcaatgcggaacaagccgtgcaccgtggaaaaatgtaccaagacaagcttctccag
attacttgggcgcccgtggtgacgcccacgcctgcactgatggctgcacccgccgagaag
tctgcagtgccagctccagtggccgttgcacctctggagaacccaaagcaattgattcag
tccatcagcgagagcgagagtctgctgggcagcgacacgttgccggagctgcgtctcgag
gacgaggaggaggacgaggagtccgaggatcgttcctggcgtcgttga
DBGET
integrated database retrieval system
