Drosophila miranda: 108163175
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Entry
108163175 CDS
T06132
Name
(RefSeq) recombination repair protein 1 isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
dmn
Drosophila miranda
Pathway
dmn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108163175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmn03400
]
108163175
Enzymes [BR:
dmn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
108163175
DNA repair and recombination proteins [BR:
dmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
108163175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
108163175
NCBI-ProteinID:
XP_017153798
LinkDB
All DBs
Position
4:12377020..12379489
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AA seq
685 aa
AA seq
DB search
MPRSKATKKPVEEALELSDATTNGSVVEEKAGTTDADAKVLTKGKPRAKKTSKKTAAENP
EPDDDENSQPSAARGGSKKQYKEEEENAGKVPKDSKGRPPKDANEEPAPKSSGAVSSRAK
KEKQPAAEKEEEPAPSKGRAKRGKAAAVEESAPKETKARGRKRKDPSEDANAVVEEAEPP
KQRAKKEQPPLIAPEPAQKGKENKTETQAKRPRANKRLADSEIAEVLEEEELAPEPPKAT
NKRTKKAKAGENGVRAELVPVGDSKTSELTEEATADAVPTKATNKRTKKSKETEAVLPSE
PMQAAKPTKQRAKKEIREEPEPATSKKRTQKASAKKEKEELAEPAESKPVRGRKKPATAT
KSEAAEDDAVDGSKSMLVEPTGCGAGAVLKSLHNVLNFCFPASKTKKVEKAGEAKVNLDK
ADFALPAEKVFNFKISSWNVAGLRAWLKKDGLQSLALEEPDIFCLQETKCSNDQLPEEVT
HVPGYHPYWLCMPGGYAGVAIYSKIMPINVEYGIGNEEFDDVGRMITAEYEKFFLINVYV
PNSGRKLVNLEARMRWEKLFQSYVQKLDALKAVVICGDMNVSHNEIDLENPKTNTKNAGF
TKEERDKMTELLGLGFVDTFRHLYPDKKGAYTYWTYMSNARARNVGWRLDYCIVSERFVS
RVVDHVIRKQLLGSDHCPITVFLNI
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgccccgctccaaggccacaaaaaaaccagtagaggaggcactagagctctctgatgct
acaacaaatggaagtgtcgttgaagaaaaagccgggactacagatgctgatgccaaagtt
ctgacgaaggggaagccacgcgcaaaaaaaacatcgaagaaaactgcagccgaaaaccca
gagccagacgacgatgaaaactcgcagccctccgctgcacgtggcggtagtaagaagcag
tacaaggaggaagaggagaacgccggaaaagtgccaaaggattcgaaagggcgtcctccg
aaggatgcaaatgaagaaccggccccaaaatctagcggagcagtcagttctcgggccaaa
aaggaaaaacagcctgctgctgaaaaagaggaagaaccagcaccgtccaagggacgtgcc
aagagaggaaaagcggcagctgtcgaggaatcggctccgaaggaaacaaaagcccgggga
cgtaagaggaaggacccttcagaagacgctaatgcggtggtagaagaagcagaaccgcca
aaacaacgagcaaaaaaagaacaaccacccttgatcgcaccagagccagcgcagaaggga
aaggaaaataaaactgagacacaagccaaacggccccgagctaacaagcgtctggcagat
tcggaaatagccgaggttcttgaggaagaagaattggctccagagccgccaaaggctact
aataagcgaactaagaaagcgaaagctggtgaaaacggtgtccgagctgagcttgtgcca
gtaggggactcgaagacttctgagctcacggaggaagcaacagcagatgctgtccccacg
aaggccaccaacaagcgaactaaaaaatcaaaagaaaccgaagctgtgctgccatctgag
cctatgcaggcagcaaagccaactaagcagagagccaaaaaggaaatcagggaggaaccc
gaaccagcaaccagcaaaaaacggactcagaaggcctccgctaaaaaggagaaggaggag
ttagcagagcctgcagaaagcaagccagttcgcggtcgaaaaaaacccgccaccgccacc
aaatctgaagctgctgaagatgatgcggttgatgggtcgaaaagtatgttggtggagccc
accgggtgcggtgccggtgcagtattgaaaagcttgcacaacgtgctcaacttttgtttt
ccagcatccaagaccaaaaaagtggagaaggcaggagaagccaaagtaaacttggataaa
gctgactttgccctgccagccgaaaaggtattcaattttaaaatctccagctggaacgta
gctgggctaagggcatggctcaagaaggacggtcttcagagtttggctctcgaggagcca
gacatattttgtctgcaagaaacaaagtgctcaaatgatcaactgcccgaagaagtgaca
cacgtgccgggctatcatccgtactggttgtgcatgccaggcggctatgctggggtggcc
atatacagcaaaattatgcccattaacgtcgagtacggcattggaaacgaggagtttgat
gatgtgggacgcatgataacagcggagtatgaaaagttctttttgataaatgtctatgtc
ccaaattcgggtcgcaagctggttaacttggaggctcgcatgcgttgggagaaacttttc
cagtcctatgtgcagaagctcgacgctttgaaggcggtcgtcatctgtggggacatgaat
gtttcgcataacgaaatcgatttggaaaatcccaagacgaacaccaaaaatgctggcttc
accaaagaggagcgcgataagatgactgagctgcttgggctaggattcgtggataccttc
aggcacttgtatcccgacaaaaagggagcctacacatactggacttacatgtccaacgca
cgcgctcgcaatgtagggtggcgtctcgactactgcattgtctccgaacgatttgtctcg
cgggtagtagaccatgtgatccggaagcagctccttggaagcgatcattgcccaattact
gtattcctaaatatttag
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