Drosophila miranda: 108163292
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Entry
108163292 CDS
T06132
Name
(RefSeq) enhancer of mRNA-decapping protein 4 homolog
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
dmn
Drosophila miranda
Pathway
dmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108163292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108163292
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108163292
mRNA degradation factors
5'-3' decay
Decapping complex
108163292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_Prp19
WD40
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
108163292
NCBI-ProteinID:
XP_017153982
LinkDB
All DBs
Position
4:22096740..22102857
Genome browser
AA seq
1393 aa
AA seq
DB search
MLVALFALAQLPIFRKPTPPTPPPPPPSSSSRPQLSRCGKATKANASAHLTSPTIFTISE
MNTNADQDQGHAIAANGNAADSNDIETIHFNPHEKQICRIIKTNHTKILASASVHTRGSS
KVKLKNIVDYKWERKYYYPGHLVAVHRDGKHLAYAINVNNKATGMEGMVRVCNISTSMRA
LIKGMSGEVLDLQFAHTDRERILAVIDMSSLFVYKIDLIEGNLLCNLVLKVEDPISNYQP
EYDMVSWCPYVCNSSSAGAPSEDDDENQLLIWSRSRQFQVFHVKMIISEHGRGKINPNVL
DAGYLKIEEDSLITCAALSPDGTTVAAACADGLVRFYQIYFFDVRNLRCLHEWKPHDGKK
VNSLFFLDNINKPVEESYWQHVITTSDNNTEIKLWNCSLWECLQTINIVAALAVPGQFIA
GIDRSANYLVVSCLDSLAVYVMQIGSASGSETGDAGELSDGEGNDQRIQNVAEFKLSSGI
LSFSIVNAAMRRLKSSVESYYPLEEPDDFDDENNSTYALVVHMFVVQAKSLQECHIIYQP
CVPEKTERKSLTSSSISSIPSKQRSETPEDNLLLLKKETTVSPNSGAGSGSVPLDALFAK
SAKRAAAASAGGSSSSAVVAMAVAAAAAPSAILQQAIDAATTIKSRSASPQFGSAYPQVN
LMTPDAFSASGTQSSSTATTAVVVATSTTTTTGTVSTGAGPVPAVTAATDAIDSQVLNTL
RMLATVTGGKAGENSNANILNLMNNTLIEDLEQQKIKDKFEARKKFIAIDRNPERNLAEN
LASGGSSPSREVQEIMATQEDADDAYEAELDNLDDDDDDDDDDEEEEEELANSSPLLEPV
DAKWLAETAKVKLVKKSAELQNAAQIMSQAVQHKNNGNVPPTLGGGSINSNSNNNTGTTL
NTSNSSSHNAGEGESTAGGNAELNDKIDLLLDLVKAQSKQLHKLENEVSKLQLQQQQTAA
VAVAAATAAQSTKSDTSLEPKNVNQLAYKIEMQLSKLMEQYLKRYENEHTKKLSEFLQAR
ENQNRELRESVVAVLNQYVLTHFTDIIGNVLNMELQRQLLPRVNAKMDQLQAQIQVEFVQ
KLGVFEKAVKENIAQVCKSKQFIDSFGKSVLIGVQSSLQSAFIESMGSTLIPAYEKSSQN
MFQQLHDAFTVGIKEFMVQFNAYLQQMPQQQGAGAGNWDELNNKLGLLKQLVESNLLKHR
TELTDAMLETQREVKSLEILLARQVQETIRAELRKFLENQNLAMRSQAATPAQSYDLRDN
IKQLLHAGQTNKAFHQALLANDLNLVEYTLRHTDSNQAFAPEGCRLEQKVLLSLIQQISA
DMTNHNELKQRYLNEALLAINMVDPITREHAPKVLSELYRNCQLFIKNCPKSTQCSNVRL
LMKAIMSYRDQLK
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgttagtcgcgctctttgcgctcgcacagttgccaatatttcgtaagccgacgccgccg
acaccgccaccgccacctccatcttcatcgtcgcgtccccaattgtcaaggtgtggcaaa
gcaacaaaagcaaacgcatccgcccatttaacatccccaacgatcttcacaatatccgag
atgaacaccaacgctgaccaggatcagggccatgccatagccgccaatgggaatgccgcc
gactccaatgatattgaaacgatccatttcaatccgcacgagaagcaaatctgtcgcatc
atcaaaacgaatcatacgaaaatcttggcatccgcctctgtccatacgcggggttcgtca
aaggtcaagctaaagaacattgtcgactacaaatgggagcgcaaatactattatcctggc
catttggtggccgtccatcgtgatggcaaacacctggcctatgccatcaacgtcaacaac
aaggccaccggcatggagggcatggtgcgtgtctgcaatatcagcaccagcatgcgtgcc
cttatcaagggtatgagcggcgaggtcttggatctgcagttcgcccacacagatcgggaa
cgtatactggctgtgatcgacatgagctcccttttcgtatacaaaatcgatctgatcgaa
ggaaatctgctgtgcaatctggtgttgaaagtcgaggatcccatttccaactatcagccc
gagtacgatatggtctcctggtgtccgtatgtgtgcaatagctcgagtgcaggtgccccc
agtgaggatgatgatgagaatcagctattgatttggtcgcgcagccgacagtttcaggtc
tttcatgtgaaaatgatcatcagtgagcatgggcgtggcaagatcaatcctaatgtcctg
gatgctggctatcttaagattgaggaggattcgttgatcacctgcgccgctctttcgccc
gatggcaccacagtggccgccgcctgtgccgatggcctggtgcgtttctatcaaatctac
ttctttgatgtccgcaatctacgctgcctgcacgaatggaagccccacgatggcaagaaa
gtcaattcgttgtttttcctggacaacatcaacaagccagtggaggaatcctactggcag
cacgtaatcaccaccagcgacaacaacacggaaatcaagctgtggaactgctcgttgtgg
gagtgcctgcagaccatcaatattgtggccgctctggccgtacccggacagtttattgct
ggcatcgatcgaagtgccaactatttggtggtgtcctgcctggatagcctggctgtttat
gtcatgcagattggcagcgccagcggcagtgagacgggagatgcgggcgaactcagtgat
ggcgagggtaacgatcagcgaatccaaaacgtggccgagttcaagctcagctcgggaata
ctctccttctcgattgtgaacgccgccatgcggcgtctgaagagctctgtggagagctac
tatcctttggaggagccggacgactttgatgatgagaacaattccacatacgcgctggtg
gtgcacatgtttgtcgtgcaggccaagagcctgcaggagtgccacatcatctaccagccg
tgtgtgcccgagaagactgaacgcaagagtctgactagcagcagcattagcagcattccg
agcaagcagcgttccgagacgcctgaagataatctgttgctcctcaaaaaggagacgact
gtctcgcccaacagtggagcaggttcaggcagtgttccactcgacgcactgtttgccaag
tccgctaagagagcagcggctgcctctgcgggtggcagcagctcttctgctgtggtggca
atggctgtagctgctgccgccgcaccttcagccatcctccagcaggccatagacgctgca
acgaccattaaatcgagatccgcttcgccccagtttggcagcgcctatccgcaggtgaat
cttatgacaccagatgcttttagtgcgagtggaacacagtccagcagcacagcgaccacc
gctgtggtggtggccaccagcaccacaaccaccacagggactgtatctaccggagcaggc
cccgtcccagcggtgactgcggccaccgatgccattgactctcaggtcttgaatactctc
cgcatgctggccaccgtgacgggcggcaaagcaggcgaaaattccaatgcgaatatcctc
aatttgatgaacaataccctcatagaggatctcgaacagcaaaagatcaaagacaagttt
gaggcgcgcaaaaagttcatagccatcgatcggaatcccgagcgaaatctagccgagaac
ttggccagcggtggctcgagtcccagtcgtgaggtgcaggagattatggccacacaggag
gatgccgatgatgcctacgaggcggagctggataatctagacgacgacgacgacgacgac
gatgatgatgaagaggaggaggaggagctggcaaactcgtcacccctgctggagccggtt
gatgccaaatggctggcagagacggccaaggtgaagctcgtaaagaaatcggcagaactg
cagaatgcagcacagatcatgtcgcaggcggtgcagcacaagaacaatggcaacgtgccg
ccaacactgggcggtggcagcatcaatagcaacagcaacaacaacactggtacaactttg
aatacgagcaacagcagcagccacaatgctggcgagggcgagagcacggcaggtggaaat
gcagagctaaatgataaaatcgatctgttattggatctggtcaaggcacaatctaagcag
ctgcacaagctggagaacgaggtgtccaagctacagctgcaacagcaacaaacggcggca
gtggcagtggcggcagcaacagcagcacagtctaccaaaagcgatacctccttggagccc
aagaatgtcaatcagttggcatacaaaatcgaaatgcagctctccaagctaatggaacag
tatctgaagcgatacgagaacgagcacacgaaaaagttgtccgagtttctgcaggcgcgc
gagaaccagaatcgtgaactccgggaatctgtggtggccgttctcaatcagtatgtgctc
actcattttacggacatcattggcaacgtactaaacatggaactgcagcgtcaattgttg
cccagggtgaatgccaaaatggatcaactccaggcccaaatacaggtggagtttgtccaa
aagttgggcgtctttgagaaggctgtcaaggaaaatattgctcaagtatgcaaaagcaag
caatttattgattccttcggcaagtcagtgctgataggtgtccaaagcagcctacagtca
gccttcatagagtccatgggcagcactctgataccggcgtatgaaaagtcctcgcagaat
atgttccagcagctacacgatgccttcactgtggggattaaggagttcatggtccaattc
aatgcctacctgcagcagatgccacagcaacaaggcgctggtgctggcaactgggatgag
ctcaataataagctcggccttttaaagcaattggtcgaaagtaatctgctcaagcatcgc
accgaactcacggacgccatgctggagacccagcgtgaggtcaagagcctggagattcta
ttagcccgccaggtgcaggagaccatacgagcggagctgcgcaagtttctggagaaccag
aacttggccatgcgctcgcaggcggccacaccagcgcaatcgtacgatttgagggacaac
attaagcagctgctgcatgcggggcagacaaataaggccttccaccaggcgctgctggcc
aacgatttgaatctggtggagtatacgctgcgacacacggacagcaaccaggcctttgcc
ccagagggatgcaggctagagcagaaagtcctgctgtcgctcattcagcaaatctccgct
gacatgaccaatcataatgagcttaaacagagatacctcaatgaggcgctgctggccatc
aatatggtggatcccattacccgcgagcatgcccccaaggtgctctccgagctgtaccgc
aattgccagctgttcatcaagaattgtcccaagagcacgcagtgcagcaatgtccgacta
ctcatgaaggccatcatgtcgtatcgggatcagctgaaatga
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