Drosophila miranda: 108163400
Help
Entry
108163400 CDS
T06132
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dmn03037
]
108163400
Cilium and associated proteins [BR:
dmn03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
108163400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
TPR_7
WD40_WDHD1_1st
WD40_Prp19
TPR_1
Beta-prop_WDR90_POC16_2nd
TPR_8
Beta-prop_EML
TPR_2
TPR_COPA_B
TPR_12
SNAP
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_WDR19_1st
EIF3I
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
TPR_IFT80_172
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
108163400
NCBI-ProteinID:
XP_017154151
LinkDB
All DBs
Position
4:complement(27623801..27630196)
Genome browser
AA seq
1504 aa
AA seq
DB search
MTLYFDTKIEFLDSDAVSTISSWHPNEPLFAVASFSPDRGGSVTIFADTGEPQRDVTYPV
HATSQATALCWHPEKALLASGWEHGDIHVWFAGHREFASVNAPHKAAIVLLQFSEQGGRM
VTADAMGLVTGWRCDGQYQFLTMFSHDLREVLLLACFRRTVESEVREEMANLAKAAVAGD
ENALDTLTNWRPRTAARGLTHSGVRDNHCFYACTQGGVVYYINQGGACIEVMKCGSLPPI
VQMLWHPKKDAVICLMEDLTVVLFLVESTGILTELDRVKMSGRGGGRQGGIAWSGNSLAI
ITGDLFVRIWDIERSDNYLLRMDLPSSSHLNSSLSSLANVTTTTSSNNFFSQDSTESNNI
LPRKPIKYGQLSSGEIFTCLAYSASYQTLCAGTSLGNLYTWKRSGTRLVTAPEDIWQLTN
ICSVRGAVRSCEWGFNELSKPCMLVNCLSNVYMLKEQPLLAFHTRELWAVQRSAKSVQLT
HCSGRQTSIQSEFAVTALALNELSLVMSNGRSISSYSLQKVDKDMDEFDEVLEAVAVDGG
DPPASTASPPSLSVKLLQTFSAECLLLCLQNQNIFCLSSSDIMVYSVGGVVLHRIQASDI
EGKIIGMDLSGCYLSVFTMNGYVKAYDVSRHDPKLLFPSKSGHDIFDDFGEFILVKCNSQ
GSHLAMVIANSSFMPRSALFCWDFERNNLFEYDLQEETSLPVRLFWDTEEPRLLAMEVKS
MMQKPQPTAKNSNSHQPPMHFVQSKIMLMFYSDQSQGSGLNMLESQLVTAGCQLLNLCVP
SVVRLKINMVEEQPLQDFADLRQCDAATRKLVLNFSLHVAEGNMDLAYRSIRSIQSKVIW
TNLAKMCVHTNRLDVAKVCMGHLEQARSVRALRQAMEDDDLETEAKVAVLAIELGMIEEA
KDLYKRCKRFDLLNKLLQATGRLDEALQMAEKEDRIHLKHTYYQKAQALREKGDIKGALE
YFEKTQNPSQNITQLLIENPGAMKRYIQTTSDPKLLRWWGQYIESSGDMDAALAVYHKAE
DWFSQVKILCYLGKISKADAIARQSGDRAACYHLARHYENVGKFQEAIMFFTRAQTFSNA
IRICKENDFQEELWTVASSSRQRDKAIAAAYFEECGNFKHAVELYHRAGMLHKALEMAFE
SQQPEILEIIATELSPDSDAELINRCADFFCSIEQHQKAVHLLAKTNHLERAVGICTEKG
VPVTEELAEMLTPDKGDFEEAKRTTILVQLGELLQQQGDYHSATKKFTQAGDKMRAMKSL
LKSGNTDKIVFFANMSRQREVYIMAANYLQALDWQGDASILKHIVSFYTKGQAFDSLANF
YAICASMEIEEYQDYGKALTAMQEASKCLEKLSHAQHAYNNLQRTVADVKQILEIQQALR
DGDNQAVIGSCRNMLIKPELPPIRHSHILAMLVRALVYAKQYPEAGRALKELAVKDNSWS
ASGLLDRALVQKVAKECDLDFNLIWNSGRQVTTATTATSMTTTTSTTSDDDDDADDEEIR
EELH
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgtactttgacactaaaattgagtttttggactcggatgcagtgagtaccatc
agcagctggcatcccaatgagcccctcttcgcagtggcctccttcagcccggatcggggc
ggttccgtcaccatatttgcagataccggtgagccgcaaagagatgtaacctatccagtg
catgccacctcgcaggccaccgccttgtgctggcacccggagaaggcgctgctggccagt
ggatgggaacacggagacatacacgtttggtttgccggtcatcgggaatttgccagcgtc
aatgcaccccacaaagcggccattgtgttgctgcaattcagcgagcagggaggccgcatg
gtcacggcggatgcaatgggtctggtcaccggctggcgctgcgatggacagtaccagttt
ctgaccatgttctcgcacgatctgcgagaggtgctgctgttggcctgcttccgacgcacc
gtcgagagcgaggtgcgtgaggagatggcaaatctggccaaggcggcggtggccggcgat
gagaacgccttggacacgctcaccaactggcggccacgaaccgctgcccgtggcctcact
cattccggagttcgggacaatcattgcttctatgcatgcacacaaggaggcgtggtctac
tacatcaaccagggcggggcctgcatcgaggtgatgaagtgcggctctctgccgcccata
gtccagatgctctggcatcccaaaaaggatgcagtcatctgcctgatggaggacttgact
gtggttctctttttggtggagtctacgggaattctaactgaactggatcgcgtaaagatg
agcggccgtggtgggggcaggcagggtggcatagcgtggtcgggcaacagcctggccatc
atcacaggcgatctttttgtgcgaatctgggacattgagcggagcgacaactatctccta
agaatggatctgcccagctctagccatttgaactcctcactctccagcctggccaatgtc
actacgaccacctcgtcgaacaatttcttcagccaggatagcaccgaaagcaacaacata
ctgcctcgcaaaccgatcaagtacggccagctgagcagtggggagatcttcacctgcctg
gcgtacagtgccagctatcagaccctgtgcgccggcacctccctgggcaacctttacacc
tggaagcgcagtggcactcgcctggtgaccgcaccggaggatatctggcagctgacgaac
atatgttcggttcggggcgccgtcagaagctgcgagtggggattcaacgagctctcgaag
ccctgcatgctggtcaactgtctgtcaaatgtgtacatgctgaaggagcagccgctgctg
gcgttccatacccgagagctgtgggcggtgcagcgatcggccaagtcggtgcagctgacg
cactgcagcggacggcagacgagtatccagtccgagtttgctgtgacggctctggccctg
aacgagctcagcctcgtgatgagcaacggacggagtatctcctcgtatagcctccagaaa
gtggacaaggacatggatgagtttgacgaggtgctggaggcagtggctgtggacggtgga
gatcctcctgcttccacggcctcccctccgtcgctgagtgtgaagctgctgcagaccttt
tccgccgagtgcctgctgctgtgcctccagaaccagaatatcttctgcctgtctagcagc
gacattatggtctactccgtgggcggtgtggtgctgcaccgcatccaggccagtgacatt
gagggaaagatcattggcatggacttgagtggctgctacctctccgtcttcacgatgaac
gggtatgtaaaggcctatgacgtttcgcggcacgatcccaagctgctctttcccagcaag
tctgggcacgacatcttcgacgactttggcgagttcattctggtgaagtgcaacagccag
ggcagccacctggccatggtcatagccaacagcagcttcatgccccgctccgcgctcttc
tgctgggactttgagcgcaacaatctcttcgagtacgacctgcaagaagagaccagtctg
ccagtgaggctcttctgggacacggaggagccgcgactcctggccatggaggtgaaatcg
atgatgcaaaagcctcagccaacagccaagaactcaaactctcatcagccgcccatgcac
tttgtccagtcgaagatcatgctgatgttttactcggatcagagtcagggatcaggtctc
aatatgctcgagtcacagctggtgaccgctggctgccagctgctgaacctctgcgtgccc
agcgtggtccgcttgaagatcaatatggtggaagagcagccgctgcaggactttgcagat
ctccgtcagtgcgatgcggcaaccaggaaactagtcctgaacttcagcctgcacgtggcg
gagggaaacatggatctggcctaccgcagcatccgctccatccagtcgaaggtcatttgg
acgaatctggccaagatgtgcgtccacacgaaccgcctggacgtggcgaaggtgtgcatg
ggccacctggagcaggcacgttccgtccgcgccttgcgacaggccatggaagacgatgat
ctcgagacagaggccaaagtggccgtcctggccatcgaactgggaatgatcgaggaggcc
aaggatctgtacaaacgctgcaagcgattcgatttgctcaacaaactcctgcaggccaca
ggccgcctggacgaggcgctccaaatggccgaaaaggaggacaggattcacctgaagcac
acttactaccagaaggcacaagcgctgcgcgaaaaaggcgacatcaagggggccctggag
tactttgaaaaaacccagaacccgtcgcagaacatcacccaactgctgatcgagaatccc
ggggccatgaagcgctacatccagaccaccagcgatcctaagctactgcgttggtggggt
cagtacattgagagctccggggacatggacgcggctttggctgtctatcacaaagcagag
gattggttctcccaggtgaagatactctgctatttgggaaagatctccaaggcggatgcg
attgccaggcagtcgggtgatcgggccgcttgctaccatctggcgcggcactacgagaac
gtgggcaagttccaggaggccattatgttcttcacgcgcgcccagaccttcagcaatgcc
attcgcatctgcaaggagaacgacttccaggaggagctctggacggtggccagctcctcg
cggcagcgggacaaggccattgcggccgcctactttgaggagtgcggaaatttcaagcac
gcagtggagctctaccaccgggcgggcatgcttcacaaggccctggagatggcattcgag
tcgcagcagccggagatcctcgagattattgccacggagctcagtccagactcggatgcg
gagctaatcaaccgctgtgcggacttcttctgcagcatcgagcaacaccagaaggccgta
catctgctggccaaaacgaaccacctggagcgggctgttggaatctgcacagagaagggt
gtgcccgtgacggaggagctggctgagatgctgacccccgacaagggggatttcgaggag
gccaagcgcaccactatcctcgtacagcttggagagctgctgcagcagcagggcgactac
cacagcgccaccaagaagttcacccaggcgggggataagatgcgggccatgaagagcctc
ctcaagtcgggaaacaccgacaagatcgtgttcttcgcgaacatgtcccgccagcgagag
gtgtatattatggcggccaactacctgcaggccctggactggcaaggcgatgcctccatc
ctcaagcacatcgtcagcttctacaccaagggtcaggccttcgattcgctggccaacttc
tatgcgatctgcgcttcgatggagatcgaggagtaccaggactatggaaaggccctgact
gccatgcaggaggcctccaagtgcctggagaaactgagccacgcccagcacgcctacaac
aatctccagcgcacggtggccgacgtcaagcagatcctagagatccagcaagcgcttcgg
gacggcgacaaccaggccgtcattggctcctgccgcaacatgctgatcaagcctgagctg
ccgcccatccggcactcccacattctggccatgcttgtgcgtgcactcgtttatgccaag
caatatccggaggcgggacgcgctctcaaggagctagccgtaaaggacaactcgtggagc
gcctcgggtctgctggaccgagctctcgtacagaaggtggcaaaggaatgcgacttggat
tttaatttgatctggaactcgggtcgtcaggtgaccacagccaccacagctaccagcatg
actaccacaacgagcacaaccagtgacgatgatgatgacgccgacgacgaggagataaga
gaggaactgcattag
DBGET
integrated database retrieval system
