Drosophila miranda: 108164039
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Entry
108164039 CDS
T06132
Name
(RefSeq) sm-like protein LSM4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
dmn
Drosophila miranda
Pathway
dmn03018
RNA degradation
dmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108164039
09123 Folding, sorting and degradation
03018 RNA degradation
108164039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108164039
03041 Spliceosome [BR:
dmn03041
]
108164039
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108164039
mRNA degradation factors
5'-3' decay
Lsm complex
108164039
Spliceosome [BR:
dmn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108164039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
108164039
NCBI-ProteinID:
XP_017155105
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Position
4:19194511..19196371
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AA seq
151 aa
AA seq
DB search
MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDAQSKSRNRTELNKNRVANSANQRTARSGNRNNFGNRSG
QLSGGSGNNALRVGASGQGNRLLAQNNKNRK
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgctgtcacttttgaaaaccgcgcagagccatcctatgttggttgaactgaaa
aatggagagacttataatggacacttggtgagctgtgactcttggatgaatatcaatcta
cgtgacgtaatttgcacttcaaaggatggcgaccgtttttggcgtatgccggaatgttat
attcgcggaagtaccattaaatatttgcgtatacctgatgaggtaatcgatatggttaaa
gaagatgcacaatccaaatcgcgcaatagaacagagcttaacaaaaatcgtgttgcaaac
tcagcaaatcaacgcacagcgcgtagcggcaaccgaaataattttggaaatcgcagcggg
caattaagtggaggttctggaaataacgctctgcgagtaggcgcttcaggacaagggaac
agactacttgcccagaataacaaaaatagaaaataa
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integrated database retrieval system