KEGG   Drosophila miranda: 108164039
Entry
108164039         CDS       T06132                                 
Name
(RefSeq) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
dmn  Drosophila miranda
Pathway
dmn03018  RNA degradation
dmn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dmn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108164039
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108164039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmn03019]
    108164039
   03041 Spliceosome [BR:dmn03041]
    108164039
Messenger RNA biogenesis [BR:dmn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108164039
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     108164039
Spliceosome [BR:dmn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    108164039
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 108164039
NCBI-ProteinID: XP_017155105
LinkDB
Position
4:19194511..19196371
AA seq 151 aa
MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDAQSKSRNRTELNKNRVANSANQRTARSGNRNNFGNRSG
QLSGGSGNNALRVGASGQGNRLLAQNNKNRK
NT seq 456 nt   +upstreamnt  +downstreamnt
atgttgccgctgtcacttttgaaaaccgcgcagagccatcctatgttggttgaactgaaa
aatggagagacttataatggacacttggtgagctgtgactcttggatgaatatcaatcta
cgtgacgtaatttgcacttcaaaggatggcgaccgtttttggcgtatgccggaatgttat
attcgcggaagtaccattaaatatttgcgtatacctgatgaggtaatcgatatggttaaa
gaagatgcacaatccaaatcgcgcaatagaacagagcttaacaaaaatcgtgttgcaaac
tcagcaaatcaacgcacagcgcgtagcggcaaccgaaataattttggaaatcgcagcggg
caattaagtggaggttctggaaataacgctctgcgagtaggcgcttcaggacaagggaac
agactacttgcccagaataacaaaaatagaaaataa

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