Drosophila miranda: 108164467
Help
Entry
108164467 CDS
T06132
Name
(RefSeq) transcription factor Sox-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dmn03000
]
108164467
Transcription factors [BR:
dmn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108164467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
108164467
NCBI-ProteinID:
XP_017155698
LinkDB
All DBs
Position
5:complement(1947201..1988680)
Genome browser
AA seq
949 aa
AA seq
DB search
MELYPSGRLHSMSGKRKSHPNKFDAKSKRSVKGLEYLQTEGQCGITKNSPSTIGKMQQQL
LNSNGNEGSVSTVTIRRGNGANANTVNRYTDTEMEMCSSMVSTSDYENTDQDTDSKSSST
TDSSNESDVNRRSTHSTRYILAKKSDSCARYTKKAKKARPRNGTDDTKIIICRKEQVNLS
NGSDSVDVSSQLRERVEGGVTGTGSIQLLANPMRKDDDVVAPQHRKVIKQEHNVDISPAS
ELLIPAQQKEAMEMEKFNKISPSPEAISEERCPPTSSSSATTSYFSIYGRDPSLEYSAIP
KLGFSQREQPVLSGCIREDRTYEKDHTVSEMIRQLQLIRSRLLTQTQFDSMTDIDASIQQ
QQQLQNVQRLQQESCLQELHHQLNTQFGAGRFTAPNPHHQQQATAVSPGNLVPFLPAFLR
PPVPAQQLIQLMPGHASSQSQHSHTHHGPTSAHKMAMQPMWPTAAVAAAHIQAALAAAAV
AASNNNNHSSSNNNLLAISASMNKPADSSGTLPTLEIGALRGSCKSRPESPVQECHSYSM
LSYSHTPPESPHGRTALVQSQSVAEECSLTFPSSPADHSVASLSEAVQDSEMEVPLNLTK
PKGSPGSSPTSCCPRDQRESLTPVVSSPPLGWHHTVQHHYTDMEAPLLKTRGQIWNSAGV
TGDCPTLCPSGIGVGVSRAARISRDSTNSCGTNSERSAALDPDCFNKNQVSPGAQPPSST
HPQRHGNGHGHGHGHSHSKPHIKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARW
KAMSNADKQPYYEEQSRLSKLHMEQHPDYRYRPRPKRTCIVDGKKMRISEYKVLMRNRRA
EMRQLWCRTGGASTAGPGSASADSCLSGQDGPPHVHAAAAAAVYHLQDMTQAVAAAAAAA
AHGDECGTPPSQPLGCATSGTFYYPAESLSPSGFSSEEMEISSQRELDD
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggaactctacccttcaggtagattgcatagcatgtcaggaaagcgaaaatcgcaccca
aacaaatttgatgccaagtccaagagaagtgttaaaggattggaatatctacagactgaa
gggcagtgtggtatcacaaaaaacagcccatcgactattggtaaaatgcagcagcagcta
ctcaacagcaatggaaacgaaggatcagtatcaaccgttaccataagaagaggcaatggg
gcgaatgcgaacacagtgaataggtatacggatacggaaatggaaatgtgctcgagtatg
gtgtcaacaagtgattacgaaaatactgaccaggataccgattcaaagagttccagtaca
acggacagttcgaacgagtcagatgttaatagaaggagtactcactcaactcgatacata
ttagcaaaaaagtcggattcatgcgcaagatacactaagaaggcgaagaaagctcgtccg
aggaatggaactgacgatacaaaaattattatatgccgcaaagagcaggttaacctttcg
aacggctccgacagtgttgatgttagttctcagctaagggagagagttgaaggtggagtt
acgggcaccggctccatccagctgcttgcaaatccgatgcgaaaagacgatgacgtcgtg
gcaccacagcatagaaaagtgattaagcaagaacataatgttgatattagtcctgcgtcc
gagctgttgattcctgcccaacaaaaagaagctatggagatggaaaagttcaataaaatt
tcaccgagcccagaagctatttcagaagaaagatgtccgcctacgtcctcgtcctcagca
acaacctcatatttttcaatttatggaagagatccttctttagaatactctgctatacct
aagctaggtttttcacaaagagaacaaccagtgctgtctggctgtatccgggaggaccgt
acatatgaaaaggatcacacggtctccgaaatgatacgacaacttcaactgattagaagt
cgcttgcttacacagactcagttcgatagcatgactgacattgatgcaagtattcagcag
cagcagcaactccaaaatgtgcagaggctgcagcaagagagttgcctgcaggagctgcat
catcagctgaatacacagttcggggcaggacgttttacagcaccgaatccccatcatcaa
cagcaagcaactgctgttagtcccggcaatttggtaccgtttcttccagcttttctgcgt
ccaccagtacctgcacagcagctgatacaactaatgcctggccatgcgagttcgcagtca
cagcacagtcatactcatcatggaccaacgagcgcacacaaaatggctatgcaaccaatg
tggccgacagctgcggtcgcggcggcacacattcaggccgctttggcggcagcagcagtg
gccgcttccaataataataaccacagttctagcaacaataatcttcttgcaatatcggca
agtatgaataagccggcggatagctccggtacactaccaacgcttgagattggagctttg
agaggaagctgcaagtcaagaccagagtctcccgttcaggagtgtcatagctattcaatg
ctttcctacagtcacacgccaccagagtcaccccacggtcgaacagccttagtccagagt
caaagtgtcgcagaagagtgctccctaaccttcccatcctcgccggccgatcatagcgta
gcaagtctttcggaagcagttcaagactccgaaatggaagtcccactgaatctaaccaag
ccgaaaggatcgccgggttcttctccaaccagttgttgcccaagagaccaacgtgaaagt
cttactcctgtcgtatccagtccgccattaggctggcatcatacagtccaacatcattac
acagacatggaagccccacttttaaaaactcgtggccaaatatggaattctgctggcgtt
acgggtgattgtccaacattatgtccctctggtattggagttggcgtatcacgggcggca
cggatcagtcgcgattccacaaacagttgcggcacgaattcagaacgctccgcagcattg
gacccagactgttttaacaaaaatcaagttagcccaggtgctcagccaccgtcatcaact
catccgcagagacatggtaatggacacggacatggccatggtcacagtcatagcaagcca
cacatcaaaagacccatgaacgcttttatggtatgggcaaaagatgagcgtaggaagatt
ttaaaagcttgtcctgacatgcataattcaaatatttcgaaaattttgggcgcccgctgg
aaggctatgtcgaatgcagacaaacagccgtactatgaagagcaatcgcgtctctcaaag
ctccacatggagcagcatccagactaccgctaccggccgcgtcccaaacgaacgtgtatc
gtggatggaaagaagatgcgcatatcagagtataaagtattgatgcgcaatcgccgagca
gagatgaggcagctctggtgccgcactggtggagctagtactgcgggtccgggaagtgcc
tctgctgactcctgcttaagtggacaggatggtccacctcatgtgcacgctgcggctgcc
gcagctgtctatcatttgcaggacatgacacaggctgtagcagccgccgccgcggctgca
gctcatggggatgaatgtggaactcctccttcacaaccgttgggctgtgcgacttctggc
actttctattatcctgcagagagcttatcgccctctggcttctcatcagaggaaatggag
atttcatcccagcgtgaattagacgactaa
DBGET
integrated database retrieval system
