Drosophila miranda: 117185868
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Entry
117185868 CDS
T06132
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
dmn
Drosophila miranda
Pathway
dmn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117185868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
117185868
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117185868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
Ras
G-alpha
Motif
Other DBs
NCBI-GeneID:
117185868
NCBI-ProteinID:
XP_033242338
LinkDB
All DBs
Position
XR:20178110..20180333
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AA seq
649 aa
AA seq
DB search
MSRHRIVRTMDYKDEYDDAQQWLYDRERGRQSISAFISKNKDIKEEGEHDEDAEDEAYEK
ARRDSESFQMPELNEMDQAKLSSCVDEVRSVVGDTVSERRIVETSMKFDYDIQKILDEIL
NGETKKSAKPTLRPKVPVPIAATTVKSASKPPPPAKISLKEPRRGFEIASPKLPSSPVIS
GRNSPIEVGEGDLSRTSASLFKVSKDQAQRNAQQLYEKERSDQKSHIHMIVIGHVDAGKS
TLMGHLLYDTGNVSQRVMHKHEQESKKLGKQSFMYAWVLDETGEERARGITMDVGQSRIE
TKTKIVTLLDAPGHKDFIPNMISGATQADVALLVVDATRGEFESGFELGGQTREHAILVR
SLGVNQLGVVINKLDTVGWSQQRFTEIVTKLKSFLKQAGFKESDVSFTPCSGLTGENLTK
TAQEAALTSWYSGRNLLDVIENFKIPERAIDRPLRMSVSDIYKGTGSGFCISGRVETGMI
CVNDKVLVGASREQAQVKSLTMDEFTQTSVFAGDQISVTLAGVDINNITVGCIISDPQTP
IPVTTRFQARIIVFSVKVPITMGYPVLLHHQSLIEPAVVCKLTASIHKSTGEVVKKKPRC
LGSNSCALVELETSRPICIERYAEFKELGRIMLRVAGVTIAAGMVTKIR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccacaggattgttcggacgatggattacaaagacgaatacgatgatgcccaa
caatggctgtacgaccgggagcgcggcaggcagagcatttccgccttcattagcaagaac
aaagacatcaaggaggaaggggagcacgacgaggacgccgaggacgaggcctacgagaag
gccagacgcgactctgagagcttccagatgcccgaactgaacgaaatggaccaggccaag
ctgagttcctgcgtggacgaggtgcggagtgtggtgggcgacaccgtgtccgagcgccgc
attgtggagacctccatgaaatttgactacgacatacagaagattttggacgagatccta
aacggagagacaaagaagtcggccaaacctacgctccgaccgaaggtgcctgtccccatt
gcagccactacagtgaagtctgccagcaagcccccgcccccggcaaaaatcagcctaaag
gagccgcggcgtggctttgaaatagcttctcccaagttaccgtcctcccctgtaatctct
ggcaggaatagccccatcgaggtgggagaaggcgatttgtcccgcacttccgccagcctc
ttcaaggtctctaaggaccaggcccaacgcaatgcccagcaactgtacgagaaggagcga
tccgaccaaaagagccacatccacatgatcgtcatcggccatgtagatgcgggaaagagc
accctgatgggccacttactctacgacacaggaaacgtctcgcagcgcgtgatgcacaag
cacgagcaagagtccaagaagcttgggaagcagagcttcatgtacgcctgggttctggac
gagaccggcgaggagcgtgcccgaggtatcaccatggacgtggggcagtctcgcatcgag
acaaagacaaagattgtgactctgctagatgcgcctggccacaaggatttcatacccaac
atgatctccggtgccacacaggcggatgtggccctcctagtggtggatgccacgcggggc
gaattcgaatccggctttgagctgggtggacagacgcgcgagcatgccatcctggtgaga
tccctgggtgtcaaccagctgggcgtggttatcaacaagctggacactgttggctggtcc
cagcagcgattcacggagattgtcaccaaactaaagtccttccttaaacaggcgggcttc
aaggagtcggacgtaagcttcacgccgtgctctggcctgaccggcgagaatctcaccaag
acagcccaggaggccgcactcaccagctggtacagtggtcgcaacctgctggacgtgatt
gagaatttcaaaataccggagcgggccatcgacagaccgctgcggatgtcagtctcggat
atctacaagggcactggttcgggattctgcatttctggacgagttgagactggtatgatc
tgcgtgaatgataaggtgctggtcggcgcaagcagggagcaggcgcaggtcaagtccctg
accatggatgagttcacccagacgagcgtctttgctggcgatcagatttcggtgacgctg
gccggcgtggatatcaacaacataaccgtcggctgcatcatcagtgacccacagacacct
attcccgtgaccacacgcttccaggcccgcatcatcgtcttcagtgtcaaggtgcccatc
accatggggtatccggtgctgctccaccaccagtcgctcatcgagccggctgttgtttgc
aaactgacggcatccatacacaagagcaccggcgaggtggtaaagaaaaagccccgttgc
ctaggcagcaactcgtgtgccctggtcgaattggagacgagtcgccccatctgcatagag
cggtacgccgaattcaaggaactgggtcgcatcatgttgcgggtggctggtgtgacgatt
gctgctggaatggtcacaaagatacgctga
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