Drosophila miranda: 117186929
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Entry
117186929 CDS
T06132
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
dmn
Drosophila miranda
Pathway
dmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117186929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
117186929
Enzymes [BR:
dmn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
117186929
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117186929
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117186929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
117186929
NCBI-ProteinID:
XP_033244177
LinkDB
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Position
2:complement(15258377..15262576)
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AA seq
404 aa
AA seq
DB search
MTLCISLTKYQYLRLCPFAVTVNPPPQRPWLPLAKPNKSRPACILPVMCYNVLCDKYATR
QMYGYCPSWALCWDYRKKSIIDEIRHYSADIISLQEIETEQFYHFFLPELKNDGYEGIFS
PKSRAKTMSEVERKYVDGCAIFFRASKFTLIKEHLIEFNQLAMANAEGSDNMLNRVMPKD
NIGLAALLKVKENAWEPMSEVTQISQPLLVCTAHIHWDPEFCDVKLIQTMMLSNELKTII
DEASHSFRPGHKNDSNSVQLLLCGDFNSLPDSGVVEYLGKGRVSMDHLDFKDMGYKSCLQ
RLLSNDTNEFTHSFKLASAYSEDIMPHTNYTFDFKGIIDYIFYTKTGMVPLGLLGPVSND
CLRENKVVGCPHPHIPSNHFPLLVELELMHTASQAPPNGLINRR
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgactctttgcatttcactcaccaaatatcaataccttcgtctctgtccctttgcagtt
accgtgaatccaccaccccagaggccgtggctgcccctggccaagccgaacaaatcgcgt
ccagcctgcattttaccggttatgtgctacaatgtgctctgcgataaatatgcgacacgg
caaatgtacggctactgtccatcgtgggccctgtgctgggattatcgaaaaaagtcaatc
atcgacgagatccgtcactattcggcggatattataagcctgcaggagatagagacggag
cagttctatcacttctttttgccagagctcaagaacgatggctacgagggcatattctcg
cccaagtcgcgtgccaagacaatgtccgaggtagagcggaagtatgtcgatgggtgtgca
atattcttcagggcctcaaaattcaccttgatcaaggagcacttgatcgaatttaaccag
ctggcgatggccaatgcagagggatcggataacatgctgaaccgtgtgatgcccaaggac
aacattggtctggccgctctgctcaaggtgaaggagaatgcttgggagccgatgtccgag
gtgacacagatctcacagccgctgctcgtctgcacggcgcacatccactgggatccggaa
ttttgtgatgtcaagctcatccagacgatgatgctcagcaatgagctcaagacgataatt
gacgaggcctcgcacagcttcagaccgggacacaagaacgactcgaacagtgttcagcta
ctgctctgcggcgacttcaattcgctacccgactccggggtggttgagtatctgggcaag
ggacgggtctccatggaccatctggactttaaggacatgggctacaagtcgtgcctgcag
cgcctgctttcgaacgacaccaacgagttcacgcattccttcaaactggcctccgcctac
agcgaagatatcatgccgcacactaactacacgttcgatttcaaaggcatcatcgactac
atattctatacgaagacgggaatggtgcctctgggtctgcttgggcccgtctcaaatgat
tgtctgcgcgagaacaaggtggtgggatgtccccatccgcacataccctccaatcatttt
ccgctactcgttgaactggagttgatgcacacggccagccaggcgcctcccaacgggttg
atcaacagacggtag
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