Drosophila miranda: 117187231
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Entry
117187231 CDS
T06132
Name
(RefSeq) structure-specific endonuclease subunit SLX1 homolog
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
dmn
Drosophila miranda
Pathway
dmn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117187231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmn03400
]
117187231
DNA repair and recombination proteins [BR:
dmn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117187231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
FANCL_C
T5orf172
zf-HC5HC2H
MUG113
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
117187231
NCBI-ProteinID:
XP_033245369
LinkDB
All DBs
Position
2:22376655..22379089
Genome browser
AA seq
303 aa
AA seq
DB search
MSNCIETLPHLKMPPPPEDETIAHKGHFYGVYLLCSQSLDSRYRGKCYVGFTVNPKRRIK
QHNRGCDFGGAKKTSKKGPWQMVMIVHGFPNNISALQFEWAWQQPTLSTRLKIFSDLKRK
KPKETHFDYNFRILNRMLGVGPWHRLALTIRWLETDYERAFDLPIPCHMEIVSGKVSISA
SQRKLEEATGTAPPVAWAHECHLCMQSIEQPERSRLGCTNPFCRLTCHMLCLASYLLGDE
PGQYIPIGGECPLCETRLSWFALLQRKRLQLGVPGEMQDNEEEDLSDDGPDVDSDVEVQE
FSD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattgcattgaaacactgccacacttgaagatgccgccgccgcctgaggatgaa
accatcgcccacaagggacatttctatggcgtctacttgctatgcagccagagtctcgac
tcgcgctatcgtggaaaatgctatgtgggcttcaccgtcaatcccaagcgacgtatcaag
cagcataatcgtggctgcgatttcggtggagcaaagaagaccagcaagaagggtccctgg
cagatggtcatgattgtccatggctttcccaacaatatctcggccctgcagttcgagtgg
gcctggcagcagcccacgctctccacccgcttgaagatcttttccgatctgaagcgcaag
aagcccaaggagacgcattttgattacaattttaggattctcaatcgcatgctgggcgtg
gggccgtggcatcgtctggcactcaccatccgctggctggaaacggactatgagcgtgcg
tttgacctgccgataccctgccacatggagattgtcagcggcaaggtgtccatctccgcc
tcgcagcgtaaactggaggaggctaccggtactgctccgcctgttgcctgggcccacgag
tgtcacctctgcatgcaaagcatcgaacagccggagcgctcccggctgggctgcaccaat
cccttttgccggctgacctgccacatgctgtgcctcgccagctatctgctgggcgatgag
cccggccaatacatacccattggtggcgagtgtccgctgtgcgagactcgactcagttgg
ttcgccctgctgcagcggaaacgtcttcagctgggagtgcccggggagatgcaggacaac
gaagaggaagacctgagcgatgatgggcccgatgtggacagcgatgtagaggtccaagaa
ttcagtgattaa
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