Drosophila miranda: 117187235
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Entry
117187235 CDS
T06132
Name
(RefSeq) structure-specific endonuclease subunit SLX1 homolog isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
dmn
Drosophila miranda
Pathway
dmn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117187235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmn03400
]
117187235
DNA repair and recombination proteins [BR:
dmn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117187235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
FANCL_C
T5orf172
zf-HC5HC2H
MUG113
DUF7445
Motif
Other DBs
NCBI-GeneID:
117187235
NCBI-ProteinID:
XP_033245373
LinkDB
All DBs
Position
2:22372365..22373779
Genome browser
AA seq
291 aa
AA seq
DB search
MPPPPEDETIAHKGHFYGVYLLCSQSLDSRYRGKCYVGFTVNPKRRIKQHNRGCDFGGAK
KTSKKGPWQMVMIVHGFPNNISALQFEWAWQQPTLSTRLKIFSDLKRKKPKETHFDYNFR
ILNRMLGVGPWHRLALTIRWLETDYERAFDLPIPCHMEIVSGKVSISASQRKLEEATGTA
PPVAWAHECHLCMQSIEQPERSRLGCTNPFCRLTCHMLCLASYLLGDEPGQYIPIGGECP
LCETRLSWFALLQRKRLQLGVPGEMQDNEEEDLSDDGPDVDSDVEVQEFSD
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgcctgaggatgaaaccatcgcccacaagggacatttctatggcgtctac
ttgctatgcagccagagtctcgactcgcgctatcgtggaaaatgctatgtgggcttcacc
gtcaatcccaagcgacgtatcaagcagcataatcgtggctgtgatttcggtggagcaaag
aagaccagcaagaagggtccctggcagatggtcatgattgtccatggctttcccaacaat
atctcggccctgcagttcgagtgggcctggcagcagcccacgctctccacccgcttgaag
atcttttccgatctgaagcgcaagaagcccaaggagacgcattttgattacaattttagg
attctcaatcgcatgctgggcgtggggccgtggcatcgtctggcactcaccatccgctgg
ctggaaacggactatgagcgtgcgtttgacctgccgataccctgccacatggagattgtc
agcggcaaggtgtccatctccgcctcgcagcgtaaactggaggaggctaccggtactgct
ccgcctgttgcctgggcccacgagtgtcacctctgcatgcaaagcatcgaacagccggag
cgctcccggctgggctgcaccaatcccttttgccggctgacctgccacatgctgtgcctc
gccagctatctgctgggcgatgagcccggccaatacatacccattggtggcgagtgtccg
ctgtgcgagactcgactcagttggttcgccctgctgcagcggaaacgtctccagctggga
gtgcccggggagatgcaggacaacgaagaggaagacctgagcgatgatgggcccgatgtg
gacagcgatgtagaggtccaagaattcagtgattaa
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