Drosophila miranda: 117187448
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Entry
117187448 CDS
T06132
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
dmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117187448
09122 Translation
03013 Nucleocytoplasmic transport
117187448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
117187448
03041 Spliceosome [BR:
dmn03041
]
117187448
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117187448
Spliceosome [BR:
dmn03041
]
Complex C
Other components
EJC/TREX
117187448
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117187448
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
DO-GTPase1
Retrotran_gag_4
PhiKZ_gp91
Motif
Other DBs
NCBI-GeneID:
117187448
NCBI-ProteinID:
XP_033246035
LinkDB
All DBs
Position
2
Genome browser
AA seq
718 aa
AA seq
DB search
MSTTAEATVKPPPMKSANYIALQTAFENALEKAIKDSSVEMLVKEYNSYTANSEHDKRLP
MDHAFRVLLMKRLKDDVKQIGDLVRLSVEATRAEIVSNTIPVVLLIDTFDMVTLDRCQEI
FKFVEELVDVWKEEIFFASCKNNILRMCNDLLRRLSRTQNTVFCGRILLFLSKFFPFSER
SGLNIVSEFNLDNLTEYGLDSKDHDDTDNKELEDTAEDIPLKIDYDLYCKFWSLQDFFRN
PNQCYGKAQWKMFHMHADNILQSFASFKLEDVRPSNSENGSEEDQAMDVDDDIVDAAVAS
TVSKANTFFAKFLTNPKLLALQLSDSNFRRAVLVQFLILFQYLQVSVKFKIDKYTLTTEQ
AEFIKDTEPRVYKLLEETPPYGRRFARTVHHMLVREEMWNNWKNEGCKEFKKPEDPPSND
EDNKPPPAKRPKRPLGDSLRDAARNGKFFLGNENLTRLWNYSPDNLQACKSEQRNFLPLL
ETYLESPHDKIDPAFEWRALRLLARQTPHFFTSPSQPSSKISDYLEQVRKRLIRDREPKQ
SAPVSSNASEQNNGLAAKRTPAESEQEAAMALQEAEPEQDLEVEDTDPVVEEVEENPGHE
KSLMVTAKHIEEVAPLIGEPWMKVGKKIGFTNDELLFYQMENATASVACTKMLCTWISED
DDATLENWAYMLEGLEMNQAADAVKAIIEKEKSGSSGTTPTVEQSQLEDDNDVEVLSD
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgactgcagaagcgaccgtcaagccgcctccgatgaagtcagcaaattacatt
gcgctccaaacagcatttgagaatgccttggaaaaggccatcaaggacagcagcgtggag
atgcttgttaaggagtacaacagctacactgccaactccgagcacgacaagcgtctgccc
atggaccatgcctttcgagtgctcctcatgaagcgcctgaaagacgacgtcaagcaaatc
ggtgatctggtgcgtctctctgtggaagccactcgggctgaaatcgtatccaacaccatt
cccgtagtactccttatagacactttcgatatggtcaccttggataggtgtcaggagatc
tttaagtttgtggaggaactggtggatgtgtggaaggaggagatattctttgcttcttgc
aaaaataacatattgcgaatgtgcaacgaccttctgcgtcgcctgtcccgtacacagaac
acagtcttctgcggtcgcattttgctcttcctctcaaagttctttccgttctccgagcgg
tctggcttgaacattgtttccgagttcaatttggacaacttgacagagtatggactggat
agtaaggatcacgatgacactgacaataaagagcttgaggacactgccgaggatatcccc
ctcaagattgattatgatctgtattgcaagttttggtcgcttcaggacttttttcgcaat
cccaatcaatgctacggcaaggcgcagtggaagatgtttcatatgcacgcggacaacata
cttcagtcatttgccagcttcaagctggaagacgtgcgtccgagcaacagcgagaacggc
agcgaggaagatcaggcgatggatgtagacgatgacattgtggatgccgcagtggcatcc
accgtgagcaaagcgaacaccttttttgccaagtttctaaccaatcccaagctactagca
ctccagctctccgattcgaatttccggcgtgccgtcctggtgcagttcctcatactcttt
cagtatcttcaagtcagcgtcaagtttaaaatcgacaaatacaccttaacaaccgaacag
gctgaattcattaaagacacggagccgcgagtgtataaacttctggaagagaccccgcca
tatggcaggcgctttgcccgaacggttcaccatatgctggtgcgcgaggagatgtggaac
aactggaagaacgagggctgcaaagagttcaagaagccggaagatcctccgtcgaacgac
gaggacaacaagcctcctcccgcgaaacgaccaaagcgtccactcggcgattccctgcgc
gatgctgctcgtaatggcaagtttttccttggcaacgagaacctgacccgtttatggaac
tactcgccggacaacttacaggcctgcaaaagtgagcagcgcaacttcctgcccctactg
gaaacgtatttggaatcgcctcacgataagattgacccagccttcgagtggcgtgctctg
cgcttacttgcccgacaaactccccatttcttcacttcgccttcgcagccgtctagcaag
atttccgactatttggagcaagtgcgcaagcgtctcatacgcgacagagagcccaagcaa
agcgccccggtatccagcaacgcatcagagcagaacaacggcctggcagcaaaaaggaca
cccgcagaaagtgagcaggaagcggctatggcgctgcaagaagcagagccagagcaggat
ctcgaggtggaagacacagatcccgttgtagaggaagtggaagagaatccgggccatgag
aagtcattgatggtcaccgccaagcatatcgaggaggtggcaccgctcattggcgagccc
tggatgaaggtgggcaaaaagataggattcaccaatgacgaactgctgttctatcaaatg
gagaatgccaccgccagtgttgcctgcacgaaaatgctgtgcacttggatctcagaagat
gacgatgccacgctggaaaactgggcctatatgcttgagggcctggagatgaaccaggcg
gccgatgccgtaaaggccatcatcgaaaaagaaaaatctggatcttctggaacgacaccc
actgttgagcagtcgcagctcgaagatgacaacgatgtcgaagtgttatccgactag
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