Drosophila miranda: 117188048
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Entry
117188048 CDS
T06132
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dmn
Drosophila miranda
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dmn03036
]
117188048
Chromosome and associated proteins [BR:
dmn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117188048
microRNA pathway
RISC loading complex
117188048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
ResIII
Helicase_C
PAZ
Dicer_platform
dsrm
Dicer_dsRBD
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
117188048
NCBI-ProteinID:
XP_033247154
LinkDB
All DBs
Position
3:10152762..10159282
Genome browser
AA seq
1726 aa
AA seq
DB search
MADNVHNGESEIKPRSYQLRLVDHITKNNGIIYLPTGSGKTYVAILALKRFSKDMDKSIE
EGGKRAIFMCNTVELARQQAMAVRKFSNLKVGFFVGEQGVDDWSKIKWSHEISDSQVLVG
TAQVMLNMVTQKYLELSSVSIVIIDECHHGTGHHPYHEFMHLFLLADRYTPLPRVVGLTG
VLIKGNEFKLVAQKLRELETTYRSNIITVSDTEELKNVMLYSTKPREYLVTYPNQVGSLQ
IGHAIQRCIEHFYVILDDLEIGKQPTRYSKGLSTFRDPHKKGYIKTLLNDFQYQLEHYGV
YAASMAIVSVILEIEIKLHQSETLALTHIYKLAICLCNRINHMLKKKLRDLVDDDTERDD
AVHTEETIINFSTPKVQRFLQYVQKTFSGKDAKDICCLVFVERRYTSKCIYQVLKKFIAV
IPALRDVLVPQFMVGRNSVSADCESVLERKWQKSAIHQFRDGEANLMVCSSVLEEGIDIK
ACNYVLILDPIKTFNMYVQTKGRARSKEAHFVLFSSDLDRMKINQQINQYRQAHTDIGEY
LKDRVLDRAEPLMQEIADHFHELIPPFINEKCAVLLPSSALMLLHRYCQSLPSDAFGFVE
PWITLISWDQKQKLFGTQAANKEVVSIELPLSSSVRDKIYSDPMTSVKAAKISAAFKTCI
KLYSTGELNERFLPVTLKDRVTAIADFHFDHWKKYSDDVIDTVNKQKLKPETQTTFKTSC
PTEFFDCRPRVGEVCYAYEIILEPQFERNDYTEHIHDNMLSGRNFALLLRKQLPPLSKMP
LFCNQGPLHVQVREHPRELVIASAEQLEQLHQFHGMLFRDLLKIWRPCFVLDRRGKDNSY
LIVPLAVGAEHQNVVDWPLVHQFQRLPTPKPVSVKQRKEQRAPRPEDYEGKIVTQWYANF
ASKRMLVHKVRRDLTPSSLMGSNHQNTSYAKFTTSKYGDDIGGIVRMDQFLIEVRELTEQ
LNFYVQQRGKTSAQSKARAKIILIPELCFNFDFPGDLWIKAVFLPSILNRLHFMLHAEAL
RQRFNTYLGLQHLPQNGVDYRPKLLEIDWSLRRNVDTHGNAIPNDYDEGSRSILEPLPIK
ELEIGMKTLQIRDLQHSWQQYLEPVDLPRNIMSAYTVELNYYNNFISGQVASVDKMEQDD
REFWLETQFKMPKGNIYETRSPAMPPAAWTALLPQTSSAPKPQSLNVLPVLMKSVSDDHI
TPAHQGEFLAAITTAGSSDVYDMERVELLGDSFLKMSASLYLASRYPDWNEGTLTKVKSR
LVSNKNLMYCLRETDIPSRISCSLFDPRLTWLPPSINLPEDVLDVWTEQPSFAKLIGPQN
LLNLALSDEEILAGRCNEDTYRRFVQDCKSNQQGYYDGGDFSSGANFLFGEVTVQNKVVA
DTLEALLGVVVRNYGLQHGFRMLEYFGICKPDVDKPLSQLLDLQLKSTKMRANASPDDID
GFLINHSYLEQNLGYKFRDRGYLLQALTHPSFPTNRLTGCYQELEFIGDAILDFLISAYI
FENNTKLRPGELTDLRSALVNNTTLGCICVRHNLHLFILAENALLSETISKFVKFQESQG
HRVTNHVRFLLEERDVQPVILDLDDEVEMAMENESEDGPRIGAFNLAQNVDVPKALGDVL
EALIAAVYLDCRDLQTTWQMIYHLFEPELKEFSQNIPISPIRQLQEHKLANPVYGPPLVD
KDVVMMYCQFTCMEKTIRVIGFGSNKDQAKLAAAKSALQKLAKCDA
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacgtgcataatggggaatccgaaataaagcctcgcagctatcagctgcgt
ctcgtggatcatattacgaagaacaatgggataatctacttgccgaccggatctggcaag
acatacgtggccatcctggccctgaagcgattctccaaagacatggacaaatcaatcgag
gagggcggaaaacgagctatatttatgtgcaatacagtcgagctagcccgccagcaggca
atggccgtgaggaaattctcaaatctcaaagtggggttctttgtgggggagcagggcgtc
gacgactggtcgaagataaaatggagccacgaaataagcgatagccaagttctggtgggc
acagcccaagtcatgttgaatatggtcacccagaagtacttggagctgagctctgtgagc
atcgtgattatagacgagtgccaccatggcactggccaccatccctaccatgagttcatg
catctgtttttactcgctgaccggtacacgccactgccgcgcgttgtgggactgacgggt
gtactcattaaaggcaacgaatttaagctggtcgctcaaaagctcagagagctggagacg
acatacagaagcaatattatcaccgtgtccgacacggaagaattgaaaaacgtgatgctc
tactctaccaaaccaagggagtatttagtgacttatccaaaccaagtggggagccttcag
atcgggcacgccatacaacgatgcatagagcacttctacgtaatcctagacgatttggag
attggcaaacagcctacgcgctattccaagggactgtcgaccttccgcgatccgcacaag
aagggatatataaagactctgctcaacgacttccagtaccagctggagcactacggcgta
tatgcggcatccatggccatagtatcggtgattctagagattgaaatcaagctgcatcag
tcggaaacccttgccctgacccacatatataagttggccatctgtctgtgtaaccggatc
aatcacatgctaaagaaaaagcttcgcgatttggtcgacgatgatacggaacgcgatgac
gcagtccacacggaggaaaccatcataaacttttcgactcccaaggtgcagagatttttg
caatacgtgcagaaaacgttctcgggcaaggatgccaaggatatttgctgcttggtcttc
gttgagcgccggtatacgagcaaatgcatataccaagtgttgaagaagttcattgcggtt
attccggcgctgcgcgatgttctcgtgccgcagtttatggtgggccgcaactcagtttca
gcggattgtgagagcgtcctggagcgcaagtggcaaaagtcggccattcaccaatttagg
gatggcgaagccaacctgatggtctgttcgagcgttctggaggaaggcatcgatataaag
gcctgcaattacgtgttgatcctggatcctataaagacattcaacatgtacgtgcagacg
aaggggcgggctcgatccaaggaggcccactttgtgcttttttcctcagatttggaccgc
atgaaaatcaaccaacaaatcaatcaatatcgccaagcccataccgacatcggagagtat
ttaaaggatcgcgtcctggatcgggccgaacctttgatgcaagagatagccgatcacttc
cacgaattgatcccaccatttataaacgaaaaatgtgccgtgctgctgcctagcagtgcc
ctgatgctgctccaccgctactgccagagcctgccctcggatgcattcggctttgtggag
ccctggatcacactaatcagttgggaccagaagcagaaactctttggcacacaggccgca
aacaaagaagtcgtctctatcgaacttccactcagctcgtccgtgcgggataaaatttat
agcgatcccatgacttccgttaaggcggcaaaaatatcggcagcctttaagacctgcatt
aaactgtactccacgggggagctcaacgagcgtttcctacccgtcacgcttaaggaccgg
gtgacggcgatagccgactttcactttgaccactggaagaaatacagcgacgatgttatc
gatacggtaaacaagcagaaactcaagccggagacacaaactaccttcaagacctcttgt
ccgacggagttcttcgattgccggccacgggtgggtgaagtctgttatgcctatgagatc
attttggagccgcagttcgagcgcaacgactacacagagcacatccacgacaacatgctg
tcgggtaggaactttgcgttgctgctgaggaagcagctgccacctctctcgaagatgccg
ctgttctgcaatcagggcccattgcatgtgcaggttagggagcacccgcgagagctggtt
attgcaagtgcggagcagctggagcaactgcatcagttccatggaatgctgttccgcgat
ctgttgaagatctggcgtccctgctttgtactggatcgtcgaggcaaggacaactcctac
ctgatcgtgcctctagccgtgggagcagagcatcagaatgtggtggactggccgctggtc
catcagttccagcgtctgcccaccccgaagcctgtcagtgtgaagcagcgcaaggaacag
cgagcgccgcgtccagaggactatgaggggaaaattgtgactcagtggtatgccaacttc
gcgagcaagcgaatgctcgtgcacaaggtgcgcagagacctgactccgagcagcctgatg
ggaagcaaccaccagaacacgagctatgccaagttcaccacgtctaagtatggcgatgac
atcggaggaattgttcgcatggaccagttcctgatcgaggtgcgcgagcttacggagcaa
ctgaacttctatgtccagcagcggggcaagacgtcggcccagagcaaggccagggccaag
atcatcctcattccggagctctgctttaatttcgatttccccggcgacctctggataaaa
gcagtgtttctacccagcatcttgaaccggctccacttcatgctgcatgctgaggcatta
cgacaacgcttcaatacctacctggggctgcaacatctgcctcaaaatggagttgactat
aggccaaagctcttggagatcgactggtcgttgcgccgcaatgtggatacccatggcaat
gccattcccaatgattatgatgaaggctcacgctccattctggagcccctacccatcaaa
gaacttgagattgggatgaagacactgcagatacgcgacttacaacattcgtggcagcag
tacctggaacccgtagacctaccccggaacatcatgtccgcctataccgtggagttgaac
tattacaacaattttatatccggccaagtggcgtctgtcgacaaaatggagcaggacgac
agggagttctggctggagacgcagttcaagatgcctaaagggaacatctatgagaccagg
agtccagcaatgccccctgccgcatggactgccctgctcccgcagaccagctcagctccc
aaaccacagtcgttgaatgtgttgccggttctgatgaagagcgtctccgatgatcacatc
actccggcccaccagggtgagttcctggcggccatcaccacagcgggatcgtccgatgtt
tatgatatggagcgagtggagctgttgggtgactcgtttctcaagatgagtgccagtctt
tacctggccagcaggtatcccgactggaacgaaggcacgctcacgaaggtcaagtcgagg
ctggtgtccaacaagaacctgatgtattgcctcagggagacggatattcccagtcgtatt
agctgcagtctgttcgaccccagattaacgtggcttccgcccagcattaatctgcccgaa
gatgtcttggatgtgtggacggagcagccgagctttgccaaactgattggtccccaaaat
ctcttgaatctggcccttagtgacgaggagattctggcaggtcgttgcaacgaggatacc
tatcgtcgctttgtgcaagattgcaagagcaatcagcaaggctattatgacggtggagac
ttctcctccggcgcgaacttcttgtttggtgaggtcactgttcagaacaaggtggtggct
gacactctggaggcccttctgggagtcgttgtgagaaactatggattgcaacatggcttc
cgcatgctggaatacttcggcatttgcaagccggacgttgataagccattgtcgcagctg
ctcgatcttcagttaaagagcaccaagatgcgagccaacgcgagccctgacgatattgat
ggcttcctgatcaaccactcctatttagaacagaatctgggctacaaattccgggatcgg
ggctacctcttgcaggccctgacgcatccgtcgtttcccaccaatcgcttgaccggctgc
taccaggagctggagttcattggcgatgccatactcgattttctcatctctgcatacatt
ttcgaaaacaataccaagctgcgtccgggcgagctcacggatctgcgctcggccttggtc
aataacacgacactgggatgcatctgcgtgcgccacaatctgcacctcttcattctggca
gagaacgcgttgctatctgaaaccatcagcaagtttgtgaaattccaagagagccaggga
cacagagtcacaaatcatgtacgctttctgctcgaggagagagatgtgcagcccgttatt
ctggacttggacgatgaagtggagatggccatggaaaatgagtcggaagacggtccacgc
atcggtgctttcaacttggcgcaaaacgtagatgtccccaaggctttaggcgatgtcctg
gaggcccttatcgcggccgtctacctggattgccgggatctgcagacaacctggcagatg
atctaccatttgtttgagcccgagctgaaggaattctcccagaatatacccatcagcccg
atccgtcagctccaagagcacaagctggccaatcccgtctacggtccgcccctggtagac
aaggacgttgtgatgatgtactgccagttcacctgcatggagaagaccattcgggtcatt
ggtttcggctccaacaaggaccaagccaaattggctgctgccaagagcgctcttcagaaa
ttggctaagtgtgatgcataa
DBGET
integrated database retrieval system
