Drosophila miranda: 117190011
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Entry
117190011 CDS
T06132
Name
(RefSeq) probable nucleoporin Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117190011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
117190011
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117190011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
RPA_C
Motif
Other DBs
NCBI-GeneID:
117190011
NCBI-ProteinID:
XP_033250993
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Position
Y
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AA seq
588 aa
AA seq
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MSFFGSSTPLGASTPAKTGCMFGSPFGSTPGAGQAVSAFGAPAFGTATATPAFGGRTAFG
TPTAGQGFGAPTAAQGFGGAQTTPATTGLGGGFGGFGAAPAAGQGGLFAAPATNTAFSGF
GQQAATSTAPASAFAGFGATTTTAPAFGGFGTGQTTGFGGSVFGSNFGKPSNTTVTPGFG
GFGGPSFMLGQPQQQPAPISADEAFAQSILNVSIFGDERDSIVAKWNYLQSMWGTGKLFY
SQSAPPVDIMPENYLCRFKAMGYSRMPGKDNKLGLVALNFDRDLSAIKPHQQQVIQTLHS
LFGGKPNMMVHVETIKELENIKCQMVIYVDEKLQHAPNEGKRILATELSNYLNQASLKPQ
LTNLGIVESLALVLPDEDQLKEYLENPPRGVDPRMWRQANLDNPDAGKFLPVPMSGFNDL
KWRVKCQEQETDRHALYMKKVEGELTELRHRHCMASAKILEHKRKLAELSHRILRIIVKQ
ECTRKVASSLTPEEEALRTKLQSMQAVVSAPTQFKGRLSELLSQMRMQRNQFAGNGGCEY
TMDPEAEDEMKNFLTMQQRAMEVLSETVNKDLKALDVIFKGLPELKQA
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttttggatcgagtacaccgctgggagcgagcacgccggccaaaactggctgc
atgttcggttcaccatttggatcgacgcccggagctggtcaagcagtgtctgcgttcggc
gccccagcatttggaaccgcaacagcgacgcctgcttttggaggcagaactgctttcggc
actcccacggctgggcaaggctttggagctcctactgcagcgcaaggttttggcggtgcc
cagacaacaccagccacaacaggacttggtggtggttttggtggattcggtgctgccccg
gcagcaggccagggaggtttgtttgcagctccagcgacaaatacagcttttagtggattt
ggtcagcaggccgctaccagcacagcgcctgcgagtgcatttgcaggctttggggcaaca
acgaccacggctccagctttcggtggctttggaactggccagacaacgggatttggcggc
agcgtgtttggctccaacttcggaaagccgtcgaataccacagttactcctggctttggt
ggattcggtggacccagttttatgctgggccagcctcaacagcagccagcacctatatca
gccgatgaggcgtttgctcaatccattctgaatgtctcaatatttggcgatgagcgtgac
agcattgtggccaaatggaactacctgcagtccatgtggggtactggaaagcttttctat
tcgcagagtgcgccgccagttgatatcatgccggagaattacctgtgtcgcttcaaagcc
atggggtacagtcgcatgcccggcaaggataacaaactgggactagtggctcttaacttt
gatagggatctttcggccatcaagccgcaccagcaacaagtgattcaaacgcttcacagt
ttgtttggcggcaagcccaacatgatggtgcacgttgaaaccataaaagagttggagaat
ataaagtgtcagatggttatctacgtggatgagaaactgcagcatgcaccgaacgaggga
aagcggatattggccaccgagctctcaaactatttaaaccaggcatcgctgaaacctcag
ctaacgaatcttgggattgtggaatcattggccctagtgctgcccgacgaggatcaactg
aaggagtatctggagaatcctcccagaggcgtagatccgcgaatgtggcgtcaagccaat
ttggataatccagacgctggtaaattcctacccgtgccaatgagtggcttcaacgacttg
aaatggcgcgtcaaatgccaggagcaggaaacagacaggcatgccctgtacatgaagaaa
gtggaaggagaactgacggagctgagacaccggcattgcatggcttcggccaaaatattg
gagcataagcgcaagctggctgagctcagtcatcgcatacttaggataattgtgaagcaa
gagtgcacacggaaggtggcctcctcgctgacacccgaagaggaggccttgcgcaccaag
ctgcagagcatgcaggccgttgtatcggcacccacacagtttaaggggcggctcagcgag
ctgctatcccagatgcgaatgcagcggaatcagtttgctggcaatggtgggtgcgagtat
acgatggacccggaggccgaggatgagatgaagaattttttgaccatgcaacagcgcgcc
atggaagtgctgagtgagactgtcaataaggacctcaaagcccttgatgttatttttaaa
ggattgcccgaacttaagcaggcatga
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