Drosophila miranda: 117190136
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Entry
117190136 CDS
T06132
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dmn
Drosophila miranda
Pathway
dmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117190136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
117190136
03041 Spliceosome [BR:
dmn03041
]
117190136
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117190136
Spliceosome [BR:
dmn03041
]
Complex B
Other components
Prp19-related factors
117190136
Complex C
117190136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_PRP39_C
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
Mad3_BUB1_I
TPR_2
TPR_15
ARM_TT21
Suf
TPR_12
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
117190136
NCBI-ProteinID:
XP_033251109
LinkDB
All DBs
Position
Y
Genome browser
AA seq
715 aa
AA seq
DB search
MKEVAKNEGATEEDDIDVELRLSRFEYLMERRLQLLNCVLLRQNPHNVHEWHKRVNLYED
KPTEIINTYTEAVQTVQPKLAVGKQHTLWVEFAKFYESNGQIHLRNSLAFVNLLASIVSL
PPLVIGLLAFVGAAEPFCEASFAQFEELSLNKRMKEVAKNEGATEEYDIDVELRLSRFEY
LMERRLQLLNCVLLRQNPHNVHEWHKRVNLYEDKPTEIINTYTEAVQTVQPKLAVGKQHT
LWVEFAKFYESNGQVEDARVVFERGTEVEYVKVEDLAAVWCEWAEMELRQQQFEAALRLM
QRATAMPKRKVAYHDDSETVQSRLHRSLKVWSMYAVLEESFGTFKTCKAVYERIIDLKIC
TPQVIINYGMFLEEHNYFEEAYRAYEKGIALFKWPNVYDIWNSYLSKFLARYGGTKLERA
RDLFEQCLDQCPAEHAKYFYLLYAKLEEEHGLARHAMSVYDRATSAVKEEEMFGLPRTRE
IYEKAIEALPEQHMRHMCVKFAELETKLGEVDRARAIYAHCSQVCDPRITADFWQTWKEF
EVRHGNEDTMREMLRIKRSIQATYNTQVNMMAAQFVNTNTNGVAADAGAGSGPDAMRLLE
EKARQAAAEAKQKPAEKAASNIMFVRGETQCGAKSKENTVVNPDEIDFGDSEDDDDDEEE
DPQQPSGDQDEAGQATTKTDDEGLIMKKLRFEQKAIPAKVFGSLKPTNQSDSDEG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggtggccaagaacgaaggggccaccgaggaggacgacatcgatgtggagctg
cgcctgtcgcgcttcgaatacctcatggagaggcgtctgcagctgctgaactgtgtcctg
ctgcgccagaatccgcacaacgttcacgagtggcacaagcgggtcaacctgtacgaggac
aagcccacggagatcatcaacacctacaccgaggccgtgcagacagtccagcccaagctg
gcggtgggaaagcagcacaccctctgggtggagtttgccaagttctacgagtccaatggc
cagatacatttacggaattcactcgcctttgtcaatcttttggcttctattgtctccttg
ccccccctggtcatcggtcttttggcctttgttggggcagcagagcccttttgcgaggcc
agctttgcgcagttcgaggagctgtcgttgaacaagcgcatgaaggaggtggccaagaac
gaaggggccaccgaggagtacgacatcgatgtggagctgcgcctgtcgcgcttcgaatac
ctcatggagaggcgtctgcagctgctgaactgtgtcctgctgcgccagaatccgcacaac
gttcacgagtggcacaagcgggtcaacctgtacgaggacaagcccacggagatcatcaac
acctacaccgaggccgtgcagacagtccagcccaagctggcggtgggaaagcagcacacc
ctctgggtggagtttgccaagttctacgagtccaatggccaggtggaggacgcccgcgtg
gtcttcgagcggggcaccgaggtggagtacgtcaaggtggaggatctggccgccgtgtgg
tgcgagtgggcggagatggagctgcgtcagcagcagttcgaggcagccctcaggctgatg
caacgtgccacggccatgcccaagcggaaggtggcgtatcacgacgactcggagacagtg
cagtcgcgcctccacagatccctgaaggtgtggtccatgtacgccgttctggaggagtcc
tttggcaccttcaagacctgcaaggccgtctacgagcgcatcatcgacctgaagatctgc
acgccgcaggtgatcatcaactatggcatgttcctcgaagagcacaactacttcgaggag
gcctatcgggcctacgagaagggcattgccctgtttaagtggccgaatgtgtacgacatc
tggaactcgtatctaagcaagttcctcgcgcgctacgggggcacaaagctggagcgggcg
cgcgacctcttcgaacagtgcctggatcagtgtcccgctgagcatgccaagtacttttac
ctgctctacgcgaagctggaggaggagcacggcctggcccggcatgccatgtccgtctac
gatcgcgccacgtccgccgtcaaggaagaggagatgttcggcctgccacgcaccagggag
atctacgagaaggccatcgaggctctgcccgagcagcatatgcgccacatgtgcgtcaaa
ttcgccgagctggagacaaagctgggcgaggtggatcgagccagggccatctacgcccat
tgctcacaggtgtgcgatccccgcatcacggcggacttctggcagacctggaaggagttc
gaggtgcgtcatggcaacgaggatacgatgcgtgaaatgctgcggatcaagcgttccatt
caggccacctacaacactcaggtcaacatgatggctgcccagtttgtcaacacgaacacg
aatggtgtggctgccgatgctggtgctggctccggaccggatgccatgcggctgctcgag
gagaaggcccgccaggcggcggccgaggccaagcagaagcccgccgagaaggctgcctcc
aatatcatgtttgtgcgcggcgagacccagtgcggggccaagagcaaggaaaatacagtt
gtcaatccggatgagattgattttggcgacagcgaggacgacgacgacgatgaggaggag
gacccgcagcagcctagtggagaccaggacgaggcaggccaggccacaaccaaaaccgat
gacgagggcctcatcatgaagaaactgcgcttcgaacaaaaggccataccggccaaggtc
tttggcagcctcaagccgacaaatcaatccgattccgatgagggataa
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