KEGG   Drosophila miranda: 117190181
Entry
117190181         CDS       T06132                                 
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
dmn  Drosophila miranda
Pathway
dmn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dmn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117190181
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmn03019]
    117190181
   03041 Spliceosome [BR:dmn03041]
    117190181
Messenger RNA biogenesis [BR:dmn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     117190181
Spliceosome [BR:dmn03041]
 Complex B
  Other components
   Prp19-related factors
    117190181
 Complex C
    117190181
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_PRP39_C HAT_Syf1_CNRKL1_N
Other DBs
NCBI-GeneID: 117190181
NCBI-ProteinID: XP_033251134
LinkDB
Position
Y
AA seq 269 aa
MFLEEHNYFEEAYRAYEKGIALFKWPNVYDIWNSYLSKFLARYGGTKLERARDLFEQCLD
QCPAEHAKYFYLLYAKLEEEHGLALHAMSACRALPEQHMRHMCVEFAELETKLGKVDRAR
AIYAHKCAIPASRRTWKEFEVRHGNEDTMREMLRIKRSIQATYNTNTNGVAADDGAGSGP
PGGGRGQAEARREGCLQYHIDIGDSEDDDDDEEEDLQQPSGDQAEAGQATTKTDDEGLIM
KKMRFEQKAIPAKVFGSLKPTNQSDSDEG
NT seq 810 nt   +upstreamnt  +downstreamnt
atgttcctcgaagagcacaactacttcgaggaggcctatcgggcctacgagaagggaatt
gccctgtttaagtggccgaatgtgtacgacatctggaactcgtatctaagcaagttcctc
gcgcgctacgggggcacaaagctggagcgggcccgcgacctcttcgaacagtgcctggat
cagtgtcccgctgagcatgccaagtacttttacctgctctacgcgaagctggaggaggag
cacggcctggccctgcatgccatgtccgcatgtcgggctctgcccgagcagcatatgcgc
cacatgtgcgtcgaattcgccgagctggagacaaagctgggcaaggtggatcgagccagg
gccatctacgctcacaagtgtgcgatccccgcatcacggcggacttggaaggagttcgag
gtgcgtcatggcaacgaggatacgatgcgtgaaatgctgcggatcaagcgttccattcag
gccacctacaacacgaacacgaatggtgtggctgccgatgatggtgctggctccggaccg
ccaggcggcggccgaggccaagcagaagcccgccgagaaggctgcctccaatatcatatt
gatattggcgacagcgaagacgacgacgacgatgaggaggaggacctgcagcagccgagt
ggagaccaggccgaggcaggccaggccacaaccaaaaccgatgacgagggcctcatcatg
aagaaaatgcgcttcgaacaaaaggccataccggccaaggtctttggcagcctcaagccg
acaaatcaatccgattccgatgagggataa

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