Drosophila miranda: 117190320
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Entry
117190320 CDS
T06132
Name
(RefSeq) THO complex subunit 5-like isoform X1
KO
K13174
THO complex subunit 5
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117190320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
117190320
03041 Spliceosome [BR:
dmn03041
]
117190320
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117190320
Spliceosome [BR:
dmn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117190320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
117190320
NCBI-ProteinID:
XP_033251284
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Position
Y
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AA seq
616 aa
AA seq
DB search
MEAILNTQFQQLEDIIGEILKVKKSGQNSDTLRTAAALKFVALKHANREVKQKIKSGRDN
LHLEKCKVDISRLQLQNLLYEVSHLKKDIVRCEKFQSRDSKLVLLSDTEYFTQLPGIEDS
KVKPESEHYKHLQRLECELRLRKDLDEKKSSLKNSKKELQQENLKQHNRYVSFAPALRTL
KSATKPLHDALQLSLDVEWKLSAVVKYLPKPLYILFINLQCLQRASDEPSFNVEVVGYKS
EAQMQELTNLKQNPKARRDYSERDIELSGRPEENPLNKELSPHPLHIRITLGSAGSIQLV
LIIRYFEQIKCATAWPQLSISNNTNHQGDTNFVQHLLRHLFANDLGNEILIPGIQYDLQN
KDLTPEKCIQYLESKDFGKAYCWLQSICSIPTVNSSMLYKHELNLNKSMRETIARITRRW
NSWLNLSQQIRGLNNKELDLYALKENVYPAALSCSLVQWTAITLEEFLAQNSDVLNISPD
DKGITYNSYRAVIVRGSAKMECFIRIPSNYPLEMPLWILSVHWNGRRTSQNNAAIKMMEY
WTNSLQPQQLEANYRILYAQLFRTIYSFDIFLETEGSMQTTIEYTKEKPYISAFAKRCRL
RLHKKGFRTRIQTIRT
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggaggctattttaaatacgcagtttcagcagctggaagatatcatcggggaaatatta
aaagtaaaaaagagcgggcagaactcagacacattgcgaactgcggcggcattgaaattt
gttgcattaaagcatgcaaatcgagaagttaaacagaaaataaagtctggacgggataac
ttacacttggaaaaatgtaaagtggacataagtcggttgcaattgcaaaatcttctgtac
gaagtgagccacttgaaaaaggacatcgtgcgttgcgagaaattccagagtcgtgactcc
aagttggtcctgctctcagacactgagtattttacccaattgccgggaattgaagatagt
aaagtgaaaccagaatcggagcactacaagcatttgcagcgcttagagtgtgaactgcgt
ttaaggaaagacctggatgaaaagaaaagctcattgaagaactccaaaaaggagctgcaa
caagagaatcttaaacaacataataggtacgtttcattcgcgccagctctacgcacccta
aagagtgctacgaaaccgctgcatgatgcactgcagctttctcttgatgttgaatggaag
cttagtgctgtggtcaaatatctgcccaagcctctttatatattattcatcaacctgcaa
tgccttcaacgtgcgagcgatgagccatcattcaatgttgaagtggtaggatataaaagt
gaagctcagatgcaggagttgacaaacctaaagcaaaacccaaaagcaaggcgcgactac
tctgaaagggacattgaattgtcgggaaggcctgaggaaaatcctttgaacaaagaatta
agtcctcatcctctgcacattcgcatcacgcttggctctgctggctcgattcaactggtg
ttgattattcgctatttcgaacaaattaaatgtgcgacagcatggcctcaattgagcatt
tccaataatacaaaccatcaaggggatactaatttcgttcagcatctccttcggcatttg
tttgcaaacgatttgggtaatgaaatacttatacccggtattcaatacgatttacagaat
aaggatctgacaccagagaaatgtatacaatatctggagtctaaggactttggaaaagca
tactgttggttacaaagtatatgctctataccaacagtcaacagctcgatgttgtataag
catgagctgaacttgaataaaagcatgcgggagaccatagctcgcattacacggcgctgg
aactcttggttaaatctaagtcagcaaatacgtggtctgaataacaaggaactggatttg
tatgcactaaaagaaaatgtctatcctgcggccttgtcttgcagcctagtgcagtggacg
gcgatcactctcgaggaattcctagcccaaaattcagacgtactaaacatttctccggat
gataagggcataacatacaattcctatcgtgctgtgattgttcgtggctctgccaaaatg
gagtgtttcattcgaataccgagtaattatccattggaaatgccactctggatattgagt
gtgcattggaacggtcgccgtacatcgcagaataatgcagctatcaagatgatggagtac
tggaccaactcattgcaaccccaacagctggaagcaaattatcgtattctgtacgctcag
cttttccgaactatttatagttttgacatctttctggagacagaaggctcaatgcagacg
actatagaatacaccaaggaaaagccttatataagtgcatttgcaaaacgatgccgattg
cgattgcataaaaaagggttccgtacacgcattcaaacaataaggacctaa
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