Drosophila miranda: 117190334
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Entry
117190334 CDS
T06132
Name
(RefSeq) THO complex subunit 5-like isoform X1
KO
K13174
THO complex subunit 5
Organism
dmn
Drosophila miranda
Pathway
dmn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117190334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
117190334
03041 Spliceosome [BR:
dmn03041
]
117190334
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117190334
Spliceosome [BR:
dmn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117190334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
117190334
NCBI-ProteinID:
XP_033251303
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Position
Y
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AA seq
401 aa
AA seq
DB search
MEAILNTQFQQLEDIIEEILKVKKSGQNSDTLRTAAALKFVALKHANREVKQKIKSGRDN
LHLEKCKVDISRLQLQNLLYEVSHLKKDIVRCEKFQSRDSKLVLLSDTEYFTKLPGIEDS
KVKPESEHYKHLQRLECELRLRKDLDEQKSSLKNSKKELQQENLKQHNRYVSFAPALRTL
KSATKPLHDALQLSLDVEWKLSAVVKYLPKPLYILFIKLQCRQRASDEPSFNVEVIGYES
EAQMQELTNLKQNPKARRDYSERDIELSGKPEENPLNKELSPHPLHIRITLGSAGSIQLV
LIIRYFEQIKCATAWPQLSISNNTNHQGDTNFVQHLLRHLFANDLGNDIPIPGIQYDLQN
KDLTPEECIQYLESKDFGKAYCWLQSICSIPTVNSSLLYKH
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggaggctattttaaatacgcagtttcaacagctggaagatatcatcgaggaaatatta
aaagtaaaaaaaagcgggcagaactcagacacattgcgaactgcggcggcattgaaattt
gttgcattaaagcatgcaaatcgagaagttaaacagaaaataaagtctggacgggataac
ttacacttggaaaaatgtaaagtggacataagtcggttgcaattgcaaaatcttctgtac
gaagtgagccacttgaaaaaggacatcgtgcgttgcgagaaattccagagtcgtgactcc
aagttggtcctgctctcagacactgagtattttaccaaattgccgggaattgaagatagt
aaagtgaaaccagaatcggagcactacaagcatttgcagcgcttagagtgtgaactgcgt
ttaaggaaagacctggatgaacagaaaagctcattgaagaactccaaaaaggagctgcaa
caagagaatcttaaacaacataataggtacgtttcattcgcgccagctctacgcacccta
aagagtgctacgaaaccgctgcatgatgcactgcagctttctcttgatgttgaatggaag
cttagtgctgtggtcaaatatctgcccaagcctctttatatattattcatcaaactgcaa
tgccgtcaacgtgcgagcgatgagccatcattcaatgttgaagtgataggatatgaaagt
gaagctcagatgcaggagttgacaaacctaaagcaaaacccaaaagcaaggcgcgactac
tctgaaagggacattgaattgtcgggaaagcctgaggaaaatcctttgaacaaagaatta
agtcctcatcctctgcacattcgcatcacgcttggctctgctggctcgattcaactggtg
ttgattattcgctatttcgaacaaattaaatgtgcgaccgcatggccccaattgagcatt
tccaataatacaaaccatcaaggggatactaatttcgttcagcatctccttcggcatttg
tttgcaaacgatttgggtaatgatatacctatacccggtattcaatacgatttacagaat
aaggatctgacaccagaggaatgtatacaatatctggagtctaaggactttggaaaagca
tactgttggttacaaagtatatgctctataccaacagtcaacagctcgctgttgtataag
cattag
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