Drosophila miranda: 117190669
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Entry
117190669 CDS
T06132
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dmn
Drosophila miranda
Pathway
dmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117190669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmn03041
]
117190669
03009 Ribosome biogenesis [BR:
dmn03009
]
117190669
Enzymes [BR:
dmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117190669
Spliceosome [BR:
dmn03041
]
Complex A
U2 snRNP components
U2 related factors
117190669
Complex B
117190669
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117190669
Ribosome biogenesis [BR:
dmn03009
]
Eukaryotic type
90S particles
Helicases
117190669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
SRP54
ResIII
ABC_tran
AAA_30
T2SSE
AAA_25
AAA_7
ATPase
TsaE
PhoH
AAA_24
Motif
Other DBs
NCBI-GeneID:
117190669
NCBI-ProteinID:
XP_033251623
LinkDB
All DBs
Position
Y
Genome browser
AA seq
737 aa
AA seq
DB search
MSKRRIEVGETYVSKSKNRVADASSTSASASASTVAAAAGTVAQILGGFVPSKQPPTTNA
LTGKTYSQRFQNLYKKRIALPVFEYQADFMRLLSQHQCIVLVGETGSGKTTQIPQWCVDF
AVSKGRKGVSCTQPRRVAAMSVAQRVSEEMDVNLGEEVGYSIRFEDCSSAKTLLKYMTDG
MLLREAMSDPMLEQYQVILLDEAHERTLATDILMGVLKEVIRQRNDLKLIVMSATLDAGK
FQQYFDNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQ
EEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEAAPPPNANGAIGRKVVV
STNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPG
KCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRA
LELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQC
FVRPNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADN
VRQQLARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGHYLTIKDNQNV
QLHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLISLAPQYYDLNNFPQCEAKRQ
LELLQQRMETKQYQKGF
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccgtattgaagtcggtgagacctacgtcagcaagtccaagaacagggtt
gcggatgcgtcgtccacttcggcatcggcatcggcatcgacggtggcagcggccgccggc
actgttgcacagatcctgggcggatttgtgcccagcaagcagccacctacgacgaatgcc
ctgactgggaagacgtactcgcagcgcttccagaacctgtacaagaagcgtatcgcgttg
ccggtattcgagtaccaggcggacttcatgcgcctgctgagccagcaccagtgcattgtg
ctggtgggcgagacaggctcggggaagaccacccagataccacaatggtgtgtggacttt
gccgtgtccaaaggacgaaagggtgtctcgtgtacgcagccccgtcgtgtggccgctatg
tctgtggcccagcgcgtgtccgaggaaatggatgtgaatctgggcgaggaggttggctac
tccattcgttttgaggactgctcttcggccaagaccctgctgaagtacatgacggacggt
atgctgctccgcgaggctatgtccgaccccatgctggagcagtaccaggtgatcctgctc
gacgaggctcacgagcgcaccctcgcaactgacatcctgatgggcgtgctcaaggaggtc
atccggcagcgcaacgatcttaagctgattgtcatgtcggccactctcgatgctgggaag
ttccagcagtacttcgacaacgctcccctaatgaacgtgcccggtcgcacgcatcccgtg
gagatattctatacgccggagccggagagggactacttggaggcagccattcgcacagtc
atccagatacatatgtgcgaggagattgagggtgacattctcatgttcctcacgggtcag
gaggagattgaggaggcctgcaagcgcatcaaacgggaaatcgacaacctgggctcagag
attggcgagctgaagtgcattcccctgtactctacgctgcctcccaatctgcagcagcgc
atcttcgaggcggcgcccccgccgaatgccaacggagccattggccgcaaagttgtggtg
tccaccaacattgcggaaacctcgctgaccatcgatggtgtggtatttgtgattgacccg
ggctttgcgaaacagaaggtctacaatcctcgcatccgcgttgagagcttactggtgtcg
cccatttctaaggcctcggcccaacagcgggctggtcgagccggtcgtactcgtccgggc
aagtgcttccgactgtacacggagaaggccttcaagaacgagatgcaagataacacctat
cccgagattctcaggtccaatttgggcactgtggttctccagcttaaaaagctaggcatc
gacgacttggtgcactttgactttatggatccccctgcaccggagacccttatgcgagcg
ctggagctgctcaactatctggccgccctggacgacgatggcaacctgacagacttgggg
gcagtcatgtccgagttccccctggatccgcagctcgccaagatgctgatagccagctgc
cagcacaactgctccaacgagatactttccataacggccatgctgtcggtgccacaatgt
tttgtgcgtcccaatgaggccaagaaggcggccgacgaagccaagatgcggttcgcacac
atcgatggggatcatttaacgttgctgaatgtctaccatgccttcaaacagagcagtgag
gaccccaactggtgctatgaaaacttcataaacttccggtcgctgaagagcgctgacaac
gttcgccagcagctggcccggattatggatcgcttcaacttgaggcgcaccagcacggag
ttcacctcaaaggactactatgtgaacatacgcaaggccctcgtccagggcttcttcatg
caggtggcccacctggagcgcaccggtcactatctgactatcaaggataaccagaatgtg
cagctgcacccctcgacctgtctggaccacaagcccgattgggtaatctacaatgagttt
gtgctaaccaccaagaactacatacgcacggtcacagatgtaaagcctgaatggctgatc
agcctggccccgcaatactacgacctgaacaacttccctcaatgcgaggcgaagcgtcag
ttggagttgctgcagcagcgaatggaaaccaagcagtaccagaagggattttaa
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integrated database retrieval system
