Drosophila miranda: 117191224
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Entry
117191224 CDS
T06132
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
dmn
Drosophila miranda
Pathway
dmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117191224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
117191224
03041 Spliceosome [BR:
dmn03041
]
117191224
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117191224
Spliceosome [BR:
dmn03041
]
Complex B
Other components
Prp19-related factors
117191224
Complex C
117191224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
HAT_PRP39_N
TPR_2
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
117191224
NCBI-ProteinID:
XP_033252034
LinkDB
All DBs
Position
Y
Genome browser
AA seq
220 aa
AA seq
DB search
MYADLEESFGTFKTCKAVYERIIDLKICTPQVIINYGMFLEEHNYFEEAYRAYEKDIALF
KWPNVYDIWNSYFSKFLARYGGTKLERARDLFEQCLDQCPAEHAKYFYLLYAKLEEEHGL
ARHAMSACRALPEQHMRHMCVEFAELETKLVKVDRARAIYAHRCAIPASRRTWKEFEVRH
GNEDTMREMPRIKRSIQATYNTNTNGVAAEWYVCGILPSI
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccgatctggaggagtcctttggcaccttcaagacctgcaaggccgtctacgag
cgcatcatcgacctgaagatctgcacgccgcaggtgatcatcaactatggcatgttcctc
gaagagcacaactacttcgaggaggcctatcgggcctacgagaaggacattgccctgttt
aagtggccgaatgtgtacgacatctggaactcgtatttcagcaagttcctcgcgcgctac
gggggcacaaagctggagcgggcccgcgacctcttcgaacagtgcctggatcagtgtccc
gctgagcatgccaagtacttttacctgctctacgcgaagctggaggaggagcacggcctg
gcccggcatgccatgtccgcatgtcgggctctgcccgagcagcatatgcgccacatgtgc
gtcgaattcgccgagctggagacgaagctggtcaaggtggatcgagccagggccatctac
gctcacaggtgtgcgatcccagcatcacggcggacttggaaggagttcgaggtgcgtcat
ggcaacgaggatacgatgcgtgaaatgccgcggatcaagcgttccattcaggccacctac
aacacgaacacgaatggtgtggctgccgagtggtatgtctgtggaatacttccctcgatt
tga
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integrated database retrieval system
